FFCP PHASE1:Mm9::chr10:127838248..127838270,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:127838248..127838270,-
|short_description=p2@Slc39a5
|description=CAGE_peak_2_at_Slc39a5_5end
|association_with_transcript=9bp_to_ENSMUST00000042666,NM_00...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72002 | |EntrezGene=72002 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D856 | |UniProt=Q9D856 | ||
|association_with_transcript=9bp_to_ENSMUST00000042666,NM_001136237,uc007hmp.2_5end | |||
|cluster_id=chr10:127838248..127838270,- | |||
|description=CAGE_peak_2_at_Slc39a5_5end | |||
|id=chr10:127838248..127838270,- | |||
|ontology_enrichment_celltype=CL:0002563!1.70e-07!9;CL:0002251!1.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.72e-08,9;CL:0002251,3.72e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.23e-28!43;UBERON:0005409!8.30e-23!59;UBERON:0004119!1.61e-14!130;UBERON:0000925!1.61e-14!130;UBERON:0006595!1.61e-14!130;UBERON:0001007!6.87e-14!128;UBERON:0001555!6.87e-14!128;UBERON:0007026!6.87e-14!128;UBERON:0004921!1.12e-12!126;UBERON:0004185!1.12e-12!126;UBERON:0000344!1.63e-12!15;UBERON:0001242!7.97e-11!13;UBERON:0000060!7.97e-11!13;UBERON:0001262!7.97e-11!13;UBERON:0004786!7.97e-11!13;UBERON:0004923!6.27e-09!24;UBERON:0002108!8.80e-09!16;UBERON:0005172!4.20e-08!49;UBERON:0005173!4.20e-08!49;UBERON:0002417!4.20e-08!49;UBERON:0000916!4.20e-08!49;UBERON:0009854!8.70e-08!23;UBERON:0009856!8.70e-08!23;UBERON:0003350!1.70e-07!9;UBERON:0004808!1.70e-07!9;UBERON:0001277!1.70e-07!9;UBERON:0002107!3.70e-07!22;UBERON:0007499!3.70e-07!22;UBERON:0006925!3.70e-07!22;UBERON:0009497!3.70e-07!22;UBERON:0000015!3.70e-07!22;UBERON:0002423!3.70e-07!22;UBERON:0006235!3.70e-07!22;UBERON:0008835!3.70e-07!22;UBERON:0003894!3.70e-07!22;UBERON:0004161!3.70e-07!22;UBERON:0008836!3.70e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-24,31;UBERON:0005409,1.27e-17,47;UBERON:0000344,9.93e-14,15;UBERON:0001242,7.48e-12,13;UBERON:0001262,7.48e-12,13;UBERON:0004786,7.48e-12,13;UBERON:0004923,2.46e-09,24;UBERON:0004119,2.26e-08,118;UBERON:0000925,2.26e-08,118;UBERON:0006595,2.26e-08,118;UBERON:0003350,3.72e-08,9;UBERON:0004808,3.72e-08,9;UBERON:0001277,3.72e-08,9;UBERON:0001007,7.30e-08,116;UBERON:0001555,7.30e-08,116;UBERON:0007026,7.30e-08,116;UBERON:0004921,6.50e-07,114 | |||
|phase1_expression=0,29.3139342417063,18.654968814971,44.462239062104,66.6191320828642,10.9121526742728,13.315920513945,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,29.5985982167802,33.2643457547397,30.4342940980961,31.0148637234534,27.149375318422,91.4012647585158,44.8613630972677,22.6165120868411,0,0,0,11.554064790051,8.81043620400009,8.37094360675713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0,0,0.867426633830679,1.82679286987285,1.84492397804847,1.05505848386836,0.470354828542819,0,11.8653584512499,0,0,0,0,0,24.2309289583559,0,0,42.1504141094176,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7376904685418,35.4363759329149,0.213288250535234,1.39342003116263,12.371276286921,22.1851877085677,32.6895724451959,29.1045207952215,28.9462727542152,31.2928013975621,15.3314477368164,15.3196483471686,16.182019230887,33.2563181202062,26.152704034838,27.680636982357,3.03468641524931,3.54170389090159,4.50830942692322,5.09128319613286,12.412959178728,8.20589092716727,15.7458977439401,19.6321496812871,16.9558626068685,18.1393830965047,0.296452627087149,3.00321190288969,6.09332884850929,9.219346607779,12.9830477688642,23.8765388154893,22.4070749567649,26.4680446454746,9.89024883327716,27.7307027319962,5.75072826109418,16.0020607497456,6.55279113540577,2.77836765741823,2.69096120282868,4.82443521363367,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0,0,1.32745138339963,0.728341908464944,1.209294227859,7.54420319023592,10.0402643579463,10.1453598821496,5.16856586336442,6.90714086007261,10.6949213515416,6.32073515871632,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,3.28540391289194,1.69465656691056,0,0,0,0,0,0.164140899745061,27.6906794798358,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0,2.23651413839534,5.40026704109006,0.836353184057875,1.74690050996942,1.48350781023303,1.48776220305605,0,10.4988128366352,0,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,2.91728060481953,1.46729213839588,2.5738091183002,2.22246727801615,2.88449080134452,2.24643446714271,3.53776096469316,2.78827229879264,2.45214243801899,2.24739617927718,2.11283002936069,2.1825478203133,4.28664322154766,3.82418275618023,3.6652751888104,3.29668720642645,5.2991611248383,2.05721551431249,2.48466128623072,1.1921809497366,2.0348498328526,2.72917203204459,2.5384382367503,4.20734337607377,3.15683653725411,4.07412341537585,2.24456908663095,3.44041552560105,3.54616136552028,3.27384834535751,1.85924209423159,4.24394544158511,0,2.33931608445408,2.79332370262788,0,0.441182838239031,0 | |phase1_expression=0,29.3139342417063,18.654968814971,44.462239062104,66.6191320828642,10.9121526742728,13.315920513945,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,29.5985982167802,33.2643457547397,30.4342940980961,31.0148637234534,27.149375318422,91.4012647585158,44.8613630972677,22.6165120868411,0,0,0,11.554064790051,8.81043620400009,8.37094360675713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0,0,0.867426633830679,1.82679286987285,1.84492397804847,1.05505848386836,0.470354828542819,0,11.8653584512499,0,0,0,0,0,24.2309289583559,0,0,42.1504141094176,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.7376904685418,35.4363759329149,0.213288250535234,1.39342003116263,12.371276286921,22.1851877085677,32.6895724451959,29.1045207952215,28.9462727542152,31.2928013975621,15.3314477368164,15.3196483471686,16.182019230887,33.2563181202062,26.152704034838,27.680636982357,3.03468641524931,3.54170389090159,4.50830942692322,5.09128319613286,12.412959178728,8.20589092716727,15.7458977439401,19.6321496812871,16.9558626068685,18.1393830965047,0.296452627087149,3.00321190288969,6.09332884850929,9.219346607779,12.9830477688642,23.8765388154893,22.4070749567649,26.4680446454746,9.89024883327716,27.7307027319962,5.75072826109418,16.0020607497456,6.55279113540577,2.77836765741823,2.69096120282868,4.82443521363367,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0,0,1.32745138339963,0.728341908464944,1.209294227859,7.54420319023592,10.0402643579463,10.1453598821496,5.16856586336442,6.90714086007261,10.6949213515416,6.32073515871632,2.10837217149998,3.09406629744561,0,0,0,0,0,0,0,0,3.28540391289194,1.69465656691056,0,0,0,0,0,0.164140899745061,27.6906794798358,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0,2.23651413839534,5.40026704109006,0.836353184057875,1.74690050996942,1.48350781023303,1.48776220305605,0,10.4988128366352,0,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,2.91728060481953,1.46729213839588,2.5738091183002,2.22246727801615,2.88449080134452,2.24643446714271,3.53776096469316,2.78827229879264,2.45214243801899,2.24739617927718,2.11283002936069,2.1825478203133,4.28664322154766,3.82418275618023,3.6652751888104,3.29668720642645,5.2991611248383,2.05721551431249,2.48466128623072,1.1921809497366,2.0348498328526,2.72917203204459,2.5384382367503,4.20734337607377,3.15683653725411,4.07412341537585,2.24456908663095,3.44041552560105,3.54616136552028,3.27384834535751,1.85924209423159,4.24394544158511,0,2.33931608445408,2.79332370262788,0,0.441182838239031,0 | ||
|short_description=p2@Slc39a5 | |||
}} | }} |
Latest revision as of 18:54, 25 September 2015
Short description: | p2@Slc39a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc39a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 9bp_to_ENSMUST00000042666, NM_001136237, uc007hmp.2_5end |
EntrezGene: | Slc39a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.72e-08 | 9 |
epithelial cell of alimentary canal | 3.72e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.52e-24 | 31 |
gastrointestinal system | 1.27e-17 | 47 |
mucosa | 9.93e-14 | 15 |
intestinal mucosa | 7.48e-12 | 13 |
wall of intestine | 7.48e-12 | 13 |
gastrointestinal system mucosa | 7.48e-12 | 13 |
organ component layer | 2.46e-09 | 24 |
endoderm-derived structure | 2.26e-08 | 118 |
endoderm | 2.26e-08 | 118 |
presumptive endoderm | 2.26e-08 | 118 |
epithelium of mucosa | 3.72e-08 | 9 |
gastrointestinal system epithelium | 3.72e-08 | 9 |
intestinal epithelium | 3.72e-08 | 9 |
digestive system | 7.30e-08 | 116 |
digestive tract | 7.30e-08 | 116 |
primitive gut | 7.30e-08 | 116 |
subdivision of digestive tract | 6.50e-07 | 114 |