FFCP PHASE1:Mm9::chr2:79879041..79879078,-: Difference between revisions
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{{FFCP|EntrezGene=18573|HGNC=|UniProt=|association_with_transcript=107bp_to_ENSMUST00000146076_5end|description=CAGE_peak_1_at_Pde1a_5end|id=chr2:79879041..79879078,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.70e-12!23;UBERON:0001009!6.70e-12!23;UBERON:0003103!2.03e-10!43;UBERON:0004872!5.08e-10!33;UBERON:0007100!6.22e-10!18;UBERON:0000948!6.22e-10!18;UBERON:0005498!6.22e-10!18;UBERON:0004140!6.22e-10!18;UBERON:0009881!6.22e-10!18;UBERON:0004141!6.22e-10!18;UBERON:0003084!6.22e-10!18;UBERON:0007005!6.22e-10!18;UBERON:0004139!6.22e-10!18;UBERON:0004291!6.22e-10!18;UBERON:0003914!1.02e-09!47;UBERON:0000926!6.84e-09!193;UBERON:0004120!6.84e-09!193;UBERON:0006603!6.84e-09!193;UBERON:0000468!1.26e-08!333;UBERON:0001008!3.45e-07!17;UBERON:0006554!3.53e-07!16;UBERON:0002113!4.27e-07!14;UBERON:0003918!4.27e-07!14;UBERON:0005095!4.27e-07!14;UBERON:0007687!4.27e-07!14;UBERON:0005156!4.33e-07!26;UBERON:0000990!4.33e-07!26;UBERON:0000479!7.22e-07!349;UBERON:0003133!8.58e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.13e-12,23;UBERON:0001009,4.13e-12,23;UBERON:0003103,1.15e-10,43;UBERON:0007100,4.20e-10,18;UBERON:0000948,4.20e-10,18;UBERON:0005498,4.20e-10,18;UBERON:0004140,4.20e-10,18;UBERON:0009881,4.20e-10,18;UBERON:0004141,4.20e-10,18;UBERON:0003084,4.20e-10,18;UBERON:0007005,4.20e-10,18;UBERON:0004139,4.20e-10,18;UBERON:0004291,4.20e-10,18;UBERON:0003914,7.88e-10,47;UBERON:0004872,1.03e-09,33;UBERON:0002113,3.29e-07,14;UBERON:0003918,3.29e-07,14;UBERON:0011143,3.29e-07,14;UBERON:0005095,3.29e-07,14;UBERON:0007687,3.29e-07,14;UBERON:0005156,4.66e-07,26;UBERON:0000990,4.66e-07,26;UBERON:0003133,9.40e-07,24|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0.198581902401771,0,0,0,0,0,0,0,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3770058511372,27.980033016586,18.1711284640065,3.12956537739216,0.218025156380447,0.439372365468944,0.388859798148567,2.09979632438044,0,0,0,0,53.7672221315129,68.4814921453629,48.988848766357,0.202316460859598,0,0,2.71075625655306,2.66788438833342,0,0,0,0,1.15265491596466,0,0,0.210324961351382,1.71390590642282,1.32521124570968,0,0,0,2.20231761998777,2.42605942361857,1.22885226604995,0,0,0.52091337055676,2.23346399201105,6.19038871034848,8.40390362772456,1.47314292736834,1.56608848879013,0.372798891650601,0.757261933331841,0.982430281388212,2.6087803983151,10.3250865237766,0,1.61910957491345,0.649776417447669,0,8.84799846830037,0,0,0,0.14084341977668,17.9657068380045,12.7402619853323,14.2213340630666,0,0,0,12.5602267690966,6.99132285847364,8.16431764856536,7.28638372417771,2.43572382649713,3.92046345335299,3.16517545160507,4.46837087115678,5.40366342717605,3.21353458054686,55.8153517710859,1.76922110389975,5.17653919831709,6.18356251689102,7.75800405016355,7.45567044872489,4.09893115816166,2.51336048176146,5.36459815938042,0,0,0,2.99581278809645,0.915001205637253,0.125654352112864,4.17178368461463,3.06858548796397,1.66230435647648,3.0825839982874,17.3126918545538,15.0532434438213,23.7559392927654,5.6819301089348,1.56144531555244,8.96618207290544,7.02242306240862,7.68594570962147,3.87808045162569,3.71529788826064,2.62364828767241,4.65666067330228,0,0.945530400839096,1.05570674498369,2.19195732427575,1.39023624612799,3.48252166522167,3.2925141825271,18.9082553477569,0,0,0,10.5634143993106,20.4037672183554,21.2473232523998,19.4130683179872,17.9055450890137,15.5809784016252,12.556833016522,11.8040296615832,10.2753501283109,12.1774288935976,15.1034066952768,16.0516242900794,11.4035990191759,12.5143565715899,9.79706856950714,2.3131894342054,0,0,3.96675849995316,20.2623838008472,19.7401171081373,16.62390251055,13.5127961497639,9.78463392917429,9.89173255785308,5.21981967698963,8.89374355509659,7.79139147280835,8.35617182572834,12.8676297498619,8.98819408654222,9.29393614461185,6.17337947088538,5.50036912763937,7.19765629441292,9.01661885384643,9.36796108088446,11.8311017172252,13.6063490587218,36.1712992350752,57.4203475640652,61.8574987695017,64.2899224032581,5.03969466048153,6.67380422864376,6.09332884850929,3.14806957338795,3.44862206360455,3.13530307678142,3.8193877767213,2.01387296215567,6.32327384422638,4.66754402419738,12.9391385874619,12.2806512730606,9.67316786655138,4.79899868099512,4.4849353380478,2.8946611281802,5.91210208533135,19.7071068241304,12.385338209594,7.29903868833309,7.04070744865506,5.19269398069629,5.71304738126433,8.97614780145875,8.19702749352193,11.0732344824387,9.24837658213425,5.57135270033509,3.9717545829156,4.19482269886384,0,0,4.91764273019036,8.82997588175144,6.58257418949947,4.45404409050372,0.163934945376675,7.57412781613119,1.26203287766503,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,5.14114106274891,29.6654778085281,9.61554259803178,13.1938437076397,15.1772513134733,2.65490276679926,2.42780636154981,2.11626489875326,1.88605079755898,1.1812075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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18573 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=107bp_to_ENSMUST00000146076_5end | |||
|cluster_id=chr2:79879041..79879078,- | |||
|description=CAGE_peak_1_at_Pde1a_5end | |||
|id=chr2:79879041..79879078,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.70e-12!23;UBERON:0001009!6.70e-12!23;UBERON:0003103!2.03e-10!43;UBERON:0004872!5.08e-10!33;UBERON:0007100!6.22e-10!18;UBERON:0000948!6.22e-10!18;UBERON:0005498!6.22e-10!18;UBERON:0004140!6.22e-10!18;UBERON:0009881!6.22e-10!18;UBERON:0004141!6.22e-10!18;UBERON:0003084!6.22e-10!18;UBERON:0007005!6.22e-10!18;UBERON:0004139!6.22e-10!18;UBERON:0004291!6.22e-10!18;UBERON:0003914!1.02e-09!47;UBERON:0000926!6.84e-09!193;UBERON:0004120!6.84e-09!193;UBERON:0006603!6.84e-09!193;UBERON:0000468!1.26e-08!333;UBERON:0001008!3.45e-07!17;UBERON:0006554!3.53e-07!16;UBERON:0002113!4.27e-07!14;UBERON:0003918!4.27e-07!14;UBERON:0005095!4.27e-07!14;UBERON:0007687!4.27e-07!14;UBERON:0005156!4.33e-07!26;UBERON:0000990!4.33e-07!26;UBERON:0000479!7.22e-07!349;UBERON:0003133!8.58e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.13e-12,23;UBERON:0001009,4.13e-12,23;UBERON:0003103,1.15e-10,43;UBERON:0007100,4.20e-10,18;UBERON:0000948,4.20e-10,18;UBERON:0005498,4.20e-10,18;UBERON:0004140,4.20e-10,18;UBERON:0009881,4.20e-10,18;UBERON:0004141,4.20e-10,18;UBERON:0003084,4.20e-10,18;UBERON:0007005,4.20e-10,18;UBERON:0004139,4.20e-10,18;UBERON:0004291,4.20e-10,18;UBERON:0003914,7.88e-10,47;UBERON:0004872,1.03e-09,33;UBERON:0002113,3.29e-07,14;UBERON:0003918,3.29e-07,14;UBERON:0011143,3.29e-07,14;UBERON:0005095,3.29e-07,14;UBERON:0007687,3.29e-07,14;UBERON:0005156,4.66e-07,26;UBERON:0000990,4.66e-07,26;UBERON:0003133,9.40e-07,24 | |||
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0.198581902401771,0,0,0,0,0,0,0,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3770058511372,27.980033016586,18.1711284640065,3.12956537739216,0.218025156380447,0.439372365468944,0.388859798148567,2.09979632438044,0,0,0,0,53.7672221315129,68.4814921453629,48.988848766357,0.202316460859598,0,0,2.71075625655306,2.66788438833342,0,0,0,0,1.15265491596466,0,0,0.210324961351382,1.71390590642282,1.32521124570968,0,0,0,2.20231761998777,2.42605942361857,1.22885226604995,0,0,0.52091337055676,2.23346399201105,6.19038871034848,8.40390362772456,1.47314292736834,1.56608848879013,0.372798891650601,0.757261933331841,0.982430281388212,2.6087803983151,10.3250865237766,0,1.61910957491345,0.649776417447669,0,8.84799846830037,0,0,0,0.14084341977668,17.9657068380045,12.7402619853323,14.2213340630666,0,0,0,12.5602267690966,6.99132285847364,8.16431764856536,7.28638372417771,2.43572382649713,3.92046345335299,3.16517545160507,4.46837087115678,5.40366342717605,3.21353458054686,55.8153517710859,1.76922110389975,5.17653919831709,6.18356251689102,7.75800405016355,7.45567044872489,4.09893115816166,2.51336048176146,5.36459815938042,0,0,0,2.99581278809645,0.915001205637253,0.125654352112864,4.17178368461463,3.06858548796397,1.66230435647648,3.0825839982874,17.3126918545538,15.0532434438213,23.7559392927654,5.6819301089348,1.56144531555244,8.96618207290544,7.02242306240862,7.68594570962147,3.87808045162569,3.71529788826064,2.62364828767241,4.65666067330228,0,0.945530400839096,1.05570674498369,2.19195732427575,1.39023624612799,3.48252166522167,3.2925141825271,18.9082553477569,0,0,0,10.5634143993106,20.4037672183554,21.2473232523998,19.4130683179872,17.9055450890137,15.5809784016252,12.556833016522,11.8040296615832,10.2753501283109,12.1774288935976,15.1034066952768,16.0516242900794,11.4035990191759,12.5143565715899,9.79706856950714,2.3131894342054,0,0,3.96675849995316,20.2623838008472,19.7401171081373,16.62390251055,13.5127961497639,9.78463392917429,9.89173255785308,5.21981967698963,8.89374355509659,7.79139147280835,8.35617182572834,12.8676297498619,8.98819408654222,9.29393614461185,6.17337947088538,5.50036912763937,7.19765629441292,9.01661885384643,9.36796108088446,11.8311017172252,13.6063490587218,36.1712992350752,57.4203475640652,61.8574987695017,64.2899224032581,5.03969466048153,6.67380422864376,6.09332884850929,3.14806957338795,3.44862206360455,3.13530307678142,3.8193877767213,2.01387296215567,6.32327384422638,4.66754402419738,12.9391385874619,12.2806512730606,9.67316786655138,4.79899868099512,4.4849353380478,2.8946611281802,5.91210208533135,19.7071068241304,12.385338209594,7.29903868833309,7.04070744865506,5.19269398069629,5.71304738126433,8.97614780145875,8.19702749352193,11.0732344824387,9.24837658213425,5.57135270033509,3.9717545829156,4.19482269886384,0,0,4.91764273019036,8.82997588175144,6.58257418949947,4.45404409050372,0.163934945376675,7.57412781613119,1.26203287766503,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,5.14114106274891,29.6654778085281,9.61554259803178,13.1938437076397,15.1772513134733,2.65490276679926,2.42780636154981,2.11626489875326,1.88605079755898,1.18120757152309,6.14870295887855,7.75284879504663,6.18007340111759,5.70395805415554,6.32073515871632,4.21674434299995,3.09406629744561,1.70219802876894,1.26042765821917,1.29358683782755,3.00071849044229,6.20690817747958,3.74574516964348,4.60737257685939,2.13125464380219,2.11204537257339,0.847328283455281,4.19003956304428,7.09010887648364,5.00539722757307,3.31721087104857,2.74556391207214,1.31312719796049,7.57850175237612,4.63563255026274,0.854354403989263,13.8279201535359,8.88933731374616,2.0720530270516,1.23024804948923,1.60144721244566,0,0,0,6.68269432610579,35.5877992778777,26.6348501936172,19.008939984637,15.0543573130417,13.3201163885168,11.5983337890946,13.0592460046031,14.9200886930897,9.72112299688447,2.4853572523477,0,20.6332833540691,16.876766026624,13.4171319957393,13.6909412886395,14.0233584157346,15.9605844558225,12.6298253298632,10.4859344425711,2.65742532908607,4.60848010012585,0.632022241256357,6.89265731986558,3.80030541509861,1.16928740680016,2.32734704367726,0.79472541912506,1.32214994471966,0.443068581523732,0.908698049533329,0.533447646584999,0.403304740547362,0.292373642219257,0,0.467507608726276,7.25537227568676,0,0,0,12.5573236120924,13.8885031833875,8.24182309202693,6.43105137237198,10.0314420807073,0.564751842617067,0.920650473014354,0,0.68741272937475,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,1.24544817101012,3.99024873401031,4.26834014385335,3.64660075602441,5.8691685535835,4.77993121970037,5.55616819504038,5.15087643097235,8.3438994493872,6.82282471762253,7.09742039692671,7.1678009726709,6.18033949301224,5.6342134116285,6.20303064720623,8.09699275181225,5.56244764535306,5.59436739344745,7.41754621445952,7.21274708658547,9.60033906679163,6.56660482789549,7.86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| |||
|short_description=p1@Pde1a | |||
}} |
Latest revision as of 01:02, 27 September 2015
Short description: | p1@Pde1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pde1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_ENSMUST00000146076_5end |
EntrezGene: | Pde1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.13e-12 | 23 |
circulatory system | 4.13e-12 | 23 |
compound organ | 1.15e-10 | 43 |
primary circulatory organ | 4.20e-10 | 18 |
heart | 4.20e-10 | 18 |
primitive heart tube | 4.20e-10 | 18 |
primary heart field | 4.20e-10 | 18 |
anterior lateral plate mesoderm | 4.20e-10 | 18 |
heart tube | 4.20e-10 | 18 |
heart primordium | 4.20e-10 | 18 |
cardiac mesoderm | 4.20e-10 | 18 |
cardiogenic plate | 4.20e-10 | 18 |
heart rudiment | 4.20e-10 | 18 |
epithelial tube | 7.88e-10 | 47 |
splanchnic layer of lateral plate mesoderm | 1.03e-09 | 33 |
kidney | 3.29e-07 | 14 |
kidney mesenchyme | 3.29e-07 | 14 |
upper urinary tract | 3.29e-07 | 14 |
kidney rudiment | 3.29e-07 | 14 |
kidney field | 3.29e-07 | 14 |
reproductive structure | 4.66e-07 | 26 |
reproductive system | 4.66e-07 | 26 |
reproductive organ | 9.40e-07 | 24 |