FFCP PHASE1:Mm9::chr3:144690317..144690343,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=274|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:144690317..144690343,+|id=chr3:144690317..144690343,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.03e-23!59;UBERON:0000160!1.06e-22!43;UBERON:0000344!1.55e-15!15;UBERON:0001007!1.01e-12!128;UBERON:0001555!1.01e-12!128;UBERON:0007026!1.01e-12!128;UBERON:0004119!2.15e-12!130;UBERON:0000925!2.15e-12!130;UBERON:0006595!2.15e-12!130;UBERON:0001242!5.80e-12!13;UBERON:0000060!5.80e-12!13;UBERON:0001262!5.80e-12!13;UBERON:0004786!5.80e-12!13;UBERON:0004921!6.71e-11!126;UBERON:0004185!6.71e-11!126;UBERON:0004923!9.56e-09!24;UBERON:0000331!1.23e-07!3;UBERON:0002116!1.23e-07!3;UBERON:0001204!1.23e-07!3;UBERON:0001168!1.23e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.54e-25,31;UBERON:0000344,1.01e-20,15;UBERON:0002108,6.02e-20,4;UBERON:0005409,1.09e-18,47;UBERON:0000331,9.20e-16,3;UBERON:0002116,9.20e-16,3;UBERON:0001204,9.20e-16,3;UBERON:0001168,9.20e-16,3;UBERON:0001242,9.33e-14,13;UBERON:0001262,9.33e-14,13;UBERON:0004786,9.33e-14,13;UBERON:0004923,1.33e-12,24;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0001155,1.52e-10,2;UBERON:0000059,1.52e-10,2;UBERON:0001007,1.03e-08,116;UBERON:0001555,1.03e-08,116;UBERON:0007026,1.03e-08,116;UBERON:0004119,1.59e-08,118;UBERON:0000925,1.59e-08,118;UBERON:0006595,1.59e-08,118;UBERON:0002465,1.42e-07,3;UBERON:0007023,9.74e-07,51|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,3.69334398206158,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,2.3998863419011,2.98232065387321,0,0.430761996159075,1.72376986148711,9.12112413390595,1.51218077855958,3.76941868114018,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,1.52180500890047,1.89811624617805,0.988193728344065,0.502670417600539,0.795825888164603,0.58489226135736,0,7.3486936957396,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.523511883968059,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,2.56412273974171,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.701794825336225,0,0,0,0|short_description=p@chr3:144690317..144690343,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=274 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:144690317..144690343,+ | |||
|description=CAGE_peak_at_chr3:144690317..144690343,+ | |||
|id=chr3:144690317..144690343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.03e-23!59;UBERON:0000160!1.06e-22!43;UBERON:0000344!1.55e-15!15;UBERON:0001007!1.01e-12!128;UBERON:0001555!1.01e-12!128;UBERON:0007026!1.01e-12!128;UBERON:0004119!2.15e-12!130;UBERON:0000925!2.15e-12!130;UBERON:0006595!2.15e-12!130;UBERON:0001242!5.80e-12!13;UBERON:0000060!5.80e-12!13;UBERON:0001262!5.80e-12!13;UBERON:0004786!5.80e-12!13;UBERON:0004921!6.71e-11!126;UBERON:0004185!6.71e-11!126;UBERON:0004923!9.56e-09!24;UBERON:0000331!1.23e-07!3;UBERON:0002116!1.23e-07!3;UBERON:0001204!1.23e-07!3;UBERON:0001168!1.23e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.54e-25,31;UBERON:0000344,1.01e-20,15;UBERON:0002108,6.02e-20,4;UBERON:0005409,1.09e-18,47;UBERON:0000331,9.20e-16,3;UBERON:0002116,9.20e-16,3;UBERON:0001204,9.20e-16,3;UBERON:0001168,9.20e-16,3;UBERON:0001242,9.33e-14,13;UBERON:0001262,9.33e-14,13;UBERON:0004786,9.33e-14,13;UBERON:0004923,1.33e-12,24;UBERON:0001962,6.17e-11,2;UBERON:0001961,6.17e-11,2;UBERON:0001744,6.17e-11,2;UBERON:0001155,1.52e-10,2;UBERON:0000059,1.52e-10,2;UBERON:0001007,1.03e-08,116;UBERON:0001555,1.03e-08,116;UBERON:0007026,1.03e-08,116;UBERON:0004119,1.59e-08,118;UBERON:0000925,1.59e-08,118;UBERON:0006595,1.59e-08,118;UBERON:0002465,1.42e-07,3;UBERON:0007023,9.74e-07,51 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,3.69334398206158,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,2.3998863419011,2.98232065387321,0,0.430761996159075,1.72376986148711,9.12112413390595,1.51218077855958,3.76941868114018,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,1.52180500890047,1.89811624617805,0.988193728344065,0.502670417600539,0.795825888164603,0.58489226135736,0,7.3486936957396,6.17337947088538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.523511883968059,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,2.56412273974171,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.701794825336225,0,0,0,0 | |||
|short_description=p@chr3:144690317..144690343,+ | |||
}} |
Latest revision as of 04:30, 6 August 2015
Short description: | p@chr3:144690317..144690343, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:144690317..144690343, + |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.54e-25 | 31 |
mucosa | 1.01e-20 | 15 |
small intestine | 6.02e-20 | 4 |
gastrointestinal system | 1.09e-18 | 47 |
ileal mucosa | 9.20e-16 | 3 |
ileum | 9.20e-16 | 3 |
mucosa of small intestine | 9.20e-16 | 3 |
wall of small intestine | 9.20e-16 | 3 |
intestinal mucosa | 9.33e-14 | 13 |
wall of intestine | 9.33e-14 | 13 |
gastrointestinal system mucosa | 9.33e-14 | 13 |
organ component layer | 1.33e-12 | 24 |
gut-associated lymphoid tissue | 6.17e-11 | 2 |
mucosa-associated lymphoid tissue | 6.17e-11 | 2 |
lymphoid tissue | 6.17e-11 | 2 |
colon | 1.52e-10 | 2 |
large intestine | 1.52e-10 | 2 |
digestive system | 1.03e-08 | 116 |
digestive tract | 1.03e-08 | 116 |
primitive gut | 1.03e-08 | 116 |
endoderm-derived structure | 1.59e-08 | 118 |
endoderm | 1.59e-08 | 118 |
presumptive endoderm | 1.59e-08 | 118 |
lymphoid system | 1.42e-07 | 3 |
adult organism | 9.74e-07 | 51 |