FFCP PHASE1:Mm9::chr3:151916659..151916678,-: Difference between revisions
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{{FFCP|EntrezGene=68810|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=0bp_to_uc008rtd.1_5end|description=CAGE_peak_3_at_Nexn_5end|id=chr3:151916659..151916678,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.13e-13!18;UBERON:0000948!2.13e-13!18;UBERON:0005498!2.13e-13!18;UBERON:0004140!2.13e-13!18;UBERON:0009881!2.13e-13!18;UBERON:0004141!2.13e-13!18;UBERON:0003084!2.13e-13!18;UBERON:0007005!2.13e-13!18;UBERON:0004139!2.13e-13!18;UBERON:0004291!2.13e-13!18;UBERON:0004535!1.43e-09!23;UBERON:0001009!1.43e-09!23;UBERON:0003103!3.39e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.15e-26,18;UBERON:0000948,9.15e-26,18;UBERON:0005498,9.15e-26,18;UBERON:0004140,9.15e-26,18;UBERON:0009881,9.15e-26,18;UBERON:0004141,9.15e-26,18;UBERON:0003084,9.15e-26,18;UBERON:0007005,9.15e-26,18;UBERON:0004139,9.15e-26,18;UBERON:0004291,9.15e-26,18;UBERON:0004535,2.88e-19,23;UBERON:0001009,2.88e-19,23;UBERON:0004872,3.27e-12,33;UBERON:0003914,1.55e-08,47;UBERON:0003103,1.77e-08,43;UBERON:0005418,3.56e-07,5;UBERON:0002472,3.56e-07,5;UBERON:0008784,3.56e-07,5;UBERON:0006058,3.56e-07,5;UBERON:0004709,3.56e-07,5;UBERON:0002529,3.56e-07,5;UBERON:0010538,3.56e-07,5;UBERON:0005420,3.56e-07,5;UBERON:0010758,3.56e-07,5;UBERON:0000978,3.56e-07,5;UBERON:0002103,3.56e-07,5;UBERON:0000376,3.56e-07,5;UBERON:0000154,3.56e-07,5;UBERON:0010709,3.56e-07,5;UBERON:0005730,3.56e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0,3.23533699894818,6.8460870722722,3.39412677194655,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0,0,0.62336413367868,0.324482526135515,0.611036183101898,0.373220911830279,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,1.50704817835715,0.476255494059295,0.896796041993948,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.351902248327898,0,1.11218899690239,0,0.205782136407943,0,0,0,0,2.69263504296152,11.2572508790926,9.00310307305074,2.84093682702252,10.0349758191176,24.2199367233184,29.5318109833018,12.3405764643825,23.0027724463324,17.2787842409154,42.5193731964857,15.8894866709877,9.5029991826466,19.5399602609035,8.05238512562231,0,0,0,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.350679099451593,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,1.57635144106191,1.55025282754142,1.2756381492599,0,1.20879487306127,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,3.53459298086122,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.968786560175433,0.180938774784468,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.655087691238533,1.21377911746339,0.909188012978695,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.234714477291508,0.5208175393758,0,0,1.15212002503146,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.415149390336707,0.798049746802062,0,0.729320151204882,0,0.551530525350042,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,2.71560371662659,0.960377286073039,1.03383844120104,1.42888107384922,0.927074607558844,1.15745532278223,0.824171801606613,1.03039244094078,1.71434626192708,3.01708870470874,1.43061713968393,0.872078499793971,0.941093804153306,1.94613598150856,2.0122077016005,1.57841826862706,1.90125759384206,1.12228454331548,1.77952527186261,1.77308068276014,1.22769312950907,0.309873682371932,0.192906610981141,0,0,0.859484216193193,1.14772999241306,0,0.231867835620421|short_description=p3@Nexn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68810 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008rtd.1_5end | |||
|cluster_id=chr3:151916659..151916678,- | |||
|description=CAGE_peak_3_at_Nexn_5end | |||
|id=chr3:151916659..151916678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.13e-13!18;UBERON:0000948!2.13e-13!18;UBERON:0005498!2.13e-13!18;UBERON:0004140!2.13e-13!18;UBERON:0009881!2.13e-13!18;UBERON:0004141!2.13e-13!18;UBERON:0003084!2.13e-13!18;UBERON:0007005!2.13e-13!18;UBERON:0004139!2.13e-13!18;UBERON:0004291!2.13e-13!18;UBERON:0004535!1.43e-09!23;UBERON:0001009!1.43e-09!23;UBERON:0003103!3.39e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.15e-26,18;UBERON:0000948,9.15e-26,18;UBERON:0005498,9.15e-26,18;UBERON:0004140,9.15e-26,18;UBERON:0009881,9.15e-26,18;UBERON:0004141,9.15e-26,18;UBERON:0003084,9.15e-26,18;UBERON:0007005,9.15e-26,18;UBERON:0004139,9.15e-26,18;UBERON:0004291,9.15e-26,18;UBERON:0004535,2.88e-19,23;UBERON:0001009,2.88e-19,23;UBERON:0004872,3.27e-12,33;UBERON:0003914,1.55e-08,47;UBERON:0003103,1.77e-08,43;UBERON:0005418,3.56e-07,5;UBERON:0002472,3.56e-07,5;UBERON:0008784,3.56e-07,5;UBERON:0006058,3.56e-07,5;UBERON:0004709,3.56e-07,5;UBERON:0002529,3.56e-07,5;UBERON:0010538,3.56e-07,5;UBERON:0005420,3.56e-07,5;UBERON:0010758,3.56e-07,5;UBERON:0000978,3.56e-07,5;UBERON:0002103,3.56e-07,5;UBERON:0000376,3.56e-07,5;UBERON:0000154,3.56e-07,5;UBERON:0010709,3.56e-07,5;UBERON:0005730,3.56e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0,3.23533699894818,6.8460870722722,3.39412677194655,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0,0,0.62336413367868,0.324482526135515,0.611036183101898,0.373220911830279,0,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,1.50704817835715,0.476255494059295,0.896796041993948,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.351902248327898,0,1.11218899690239,0,0.205782136407943,0,0,0,0,2.69263504296152,11.2572508790926,9.00310307305074,2.84093682702252,10.0349758191176,24.2199367233184,29.5318109833018,12.3405764643825,23.0027724463324,17.2787842409154,42.5193731964857,15.8894866709877,9.5029991826466,19.5399602609035,8.05238512562231,0,0,0,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0,0.350679099451593,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.704070744865506,0.167506257441816,0.238043640886014,0.585400943573396,1.57635144106191,1.55025282754142,1.2756381492599,0,1.20879487306127,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,3.53459298086122,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.968786560175433,0.180938774784468,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0.209088296014469,0.655087691238533,1.21377911746339,0.909188012978695,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.234714477291508,0.5208175393758,0,0,1.15212002503146,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.415149390336707,0.798049746802062,0,0.729320151204882,0,0.551530525350042,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,2.71560371662659,0.960377286073039,1.03383844120104,1.42888107384922,0.927074607558844,1.15745532278223,0.824171801606613,1.03039244094078,1.71434626192708,3.01708870470874,1.43061713968393,0.872078499793971,0.941093804153306,1.94613598150856,2.0122077016005,1.57841826862706,1.90125759384206,1.12228454331548,1.77952527186261,1.77308068276014,1.22769312950907,0.309873682371932,0.192906610981141,0,0,0.859484216193193,1.14772999241306,0,0.231867835620421 | |||
|short_description=p3@Nexn | |||
}} |
Latest revision as of 19:47, 1 October 2015
Short description: | p3@Nexn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nexn_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_uc008rtd.1_5end |
EntrezGene: | Nexn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.15e-26 | 18 |
heart | 9.15e-26 | 18 |
primitive heart tube | 9.15e-26 | 18 |
primary heart field | 9.15e-26 | 18 |
anterior lateral plate mesoderm | 9.15e-26 | 18 |
heart tube | 9.15e-26 | 18 |
heart primordium | 9.15e-26 | 18 |
cardiac mesoderm | 9.15e-26 | 18 |
cardiogenic plate | 9.15e-26 | 18 |
heart rudiment | 9.15e-26 | 18 |
cardiovascular system | 2.88e-19 | 23 |
circulatory system | 2.88e-19 | 23 |
splanchnic layer of lateral plate mesoderm | 3.27e-12 | 33 |
epithelial tube | 1.55e-08 | 47 |
compound organ | 1.77e-08 | 43 |
hindlimb bud | 3.56e-07 | 5 |
stylopod | 3.56e-07 | 5 |
lower limb segment | 3.56e-07 | 5 |
multi-limb segment region | 3.56e-07 | 5 |
pelvic appendage | 3.56e-07 | 5 |
limb segment | 3.56e-07 | 5 |
paired limb/fin segment | 3.56e-07 | 5 |
pelvic appendage bud | 3.56e-07 | 5 |
subdivision of organism along appendicular axis | 3.56e-07 | 5 |
leg | 3.56e-07 | 5 |
hindlimb | 3.56e-07 | 5 |
hindlimb stylopod | 3.56e-07 | 5 |
posterior region of body | 3.56e-07 | 5 |
pelvic complex | 3.56e-07 | 5 |
hindlimb/pelvic fin field | 3.56e-07 | 5 |