FFCP PHASE1:Mm9::chr4:135412002..135412039,+: Difference between revisions
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{{FFCP|EntrezGene=14105|HGNC=|MCL_coexpression_id=327|UniProt=Q3UYX6,Q9R0U0,Q3UA07|association_with_transcript=0bp_to_ENSMUST00000154447,ENSMUST00000171299,NM_001080387,NM_010178,uc008vha.1,uc008vhb.1,uc008vhc.1_5end|description=CAGE_peak_2_at_Srsf10_5end|id=chr4:135412002..135412039,+|ontology_enrichment_celltype=CL:0000988!3.43e-09!32;CL:0002032!3.43e-09!32;CL:0000037!3.43e-09!32;CL:0000566!3.43e-09!32;CL:0000837!3.43e-09!32;CL:0000542!2.46e-07!13;CL:0000051!2.46e-07!13;CL:0002031!4.17e-07!25;CL:0000838!5.57e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,3.43e-09,32;CL:0002032,3.43e-09,32;CL:0000037,3.43e-09,32;CL:0000837,3.43e-09,32;CL:0000542,2.46e-07,13;CL:0000051,2.46e-07,13;CL:0002031,4.17e-07,25;CL:0000838,5.57e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.05e-09!147;UBERON:0004177!3.94e-09!29;UBERON:0002193!4.80e-08!48;UBERON:0000072!8.41e-08!27;UBERON:0002390!9.02e-08!45;UBERON:0003061!9.02e-08!45;UBERON:0002370!1.32e-07!23;UBERON:0000974!1.32e-07!23;UBERON:0004807!1.32e-07!23;UBERON:0005058!1.32e-07!23;UBERON:0003351!1.32e-07!23;UBERON:0009113!1.32e-07!23;UBERON:0003295!1.32e-07!23;UBERON:0009722!1.32e-07!23;UBERON:0005562!1.32e-07!23;UBERON:0007690!1.32e-07!23;UBERON:0000065!2.00e-07!41;UBERON:0000926!3.96e-07!193;UBERON:0004120!3.96e-07!193;UBERON:0006603!3.96e-07!193;UBERON:0001004!4.82e-07!42;UBERON:0003408!4.88e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.45e-09,134;UBERON:0004177,3.94e-09,29;UBERON:0005057,3.94e-09,29;UBERON:0002193,4.80e-08,48;UBERON:0002405,4.80e-08,48;UBERON:0000072,8.41e-08,27;UBERON:0002390,9.02e-08,45;UBERON:0003061,9.02e-08,45;UBERON:0000077,9.33e-08,35;UBERON:0007811,1.01e-07,36;UBERON:0002370,1.32e-07,23;UBERON:0000974,1.32e-07,23;UBERON:0004807,1.32e-07,23;UBERON:0005058,1.32e-07,23;UBERON:0003351,1.32e-07,23;UBERON:0009113,1.32e-07,23;UBERON:0003295,1.32e-07,23;UBERON:0009722,1.32e-07,23;UBERON:0005562,1.32e-07,23;UBERON:0007690,1.32e-07,23;UBERON:0000065,2.00e-07,41;UBERON:0000926,2.79e-07,120;UBERON:0004120,2.79e-07,120;UBERON:0006603,2.79e-07,120;UBERON:0000153,4.13e-07,43;UBERON:0001004,4.82e-07,42;UBERON:0003408,4.88e-07,24|phase1_expression=15.6945870162698,6.63053274514786,4.09499315450582,4.83942738090928,5.00895729946347,11.7515490338323,11.2134067485852,18.9811285459117,46.7418557543534,43.0678728432468,54.1048779592596,49.3789664181132,20.7152883216759,20.1941129587884,20.6528052325711,34.4207954562704,46.8706458345858,20.5050407482854,21.526966076101,19.9463136345074,13.6069264241712,14.0000241193248,24.0303806007821,13.759348360233,14.9116032693661,3.44539178469012,12.4920978886132,12.2818602630957,8.36103045608045,7.56090389279792,11.7517170647311,25.4012269383852,17.221814052368,0,19.3530585233354,26.0988393212833,20.0085969137122,11.7188856606334,13.2827008569046,14.1351410872926,9.99993529652724,8.19654581950135,8.73918635456076,7.80560271448579,6.9950082541465,9.54443111240744,3.9119567217402,6.75877984779384,6.37089929929968,3.4997381833371,4.4795654920116,2.87505128729943,24.160695272314,15.9579671242496,14.7881271622684,8.48956138918625,5.15760191889762,7.73508138416164,11.9366711907163,5.81890077199236,7.60597684207415,7.45457970552091,5.33576877666684,4.49949858640699,2.96659908770092,1.4209602298922,4.79360176829448,4.61061966385865,15.4497522339632,10.9354810048669,13.2504725651371,5.99867067247988,4.63823935998388,15.0663683034393,11.5973019932066,5.51531271966013,6.60695285996332,9.95961237064464,11.8277030607307,10.0233578674947,9.69769022185542,9.89735404057844,7.53794097303729,6.75315132038016,10.2374826010463,7.36571463684169,12.2439645487229,10.8111678578674,27.564334373279,19.5730340676574,15.6526823898906,13.7667820317022,5.439770669662,5.93673510801599,6.49776417447669,7.16843019355737,6.17955448579708,12.7822741933543,12.7295142255406,13.4269038313929,14.6477156567748,11.5493829672886,15.2883143823987,14.2213340630666,19.0512116089868,19.5087096415826,17.6933555755174,11.7609396110632,12.1700805314171,12.7660239595749,13.8788261412909,11.5696881758614,10.3776973765226,11.9070886036572,14.2282335634203,14.0746582289237,6.92145909656247,10.5557530551536,15.0383793831479,15.3678507450039,16.5631138845295,19.3950101254089,13.0474232852686,9.36898550436951,14.0329293565015,7.66371165625774,21.2072770375479,19.7967901227825,24.3974835980284,14.8292733010774,10.5225138648284,12.942398267625,10.7771078519211,9.97290283588289,11.2205544062162,12.1680947300818,16.09061948835,12.8139179728396,10.6143558542143,11.1534183619831,18.0867415718158,13.7941262660084,14.7650946440386,10.8507468841715,14.2876648217788,15.8861013153214,16.1166966242734,16.815719098036,11.4251036254406,16.0740168142646,12.8444320639683,12.9325482132269,13.0682207136031,9.4028084960985,10.2891068203972,16.3208098791164,21.7686088067103,15.9555702411123,10.2298859782413,16.3629360303046,14.7751417788091,12.244220179349,10.8902578369197,10.6252685143598,9.87309522479221,9.53389173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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14105 | |||
|HGNC= | |||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYX6,Q9R0U0,Q3UA07 | |||
|association_with_transcript=0bp_to_ENSMUST00000154447,ENSMUST00000171299,NM_001080387,NM_010178,uc008vha.1,uc008vhb.1,uc008vhc.1_5end | |||
|cluster_id=chr4:135412002..135412039,+ | |||
|description=CAGE_peak_2_at_Srsf10_5end | |||
|id=chr4:135412002..135412039,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.43e-09!32;CL:0002032!3.43e-09!32;CL:0000037!3.43e-09!32;CL:0000566!3.43e-09!32;CL:0000837!3.43e-09!32;CL:0000542!2.46e-07!13;CL:0000051!2.46e-07!13;CL:0002031!4.17e-07!25;CL:0000838!5.57e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.43e-09,32;CL:0002032,3.43e-09,32;CL:0000037,3.43e-09,32;CL:0000837,3.43e-09,32;CL:0000542,2.46e-07,13;CL:0000051,2.46e-07,13;CL:0002031,4.17e-07,25;CL:0000838,5.57e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.05e-09!147;UBERON:0004177!3.94e-09!29;UBERON:0002193!4.80e-08!48;UBERON:0000072!8.41e-08!27;UBERON:0002390!9.02e-08!45;UBERON:0003061!9.02e-08!45;UBERON:0002370!1.32e-07!23;UBERON:0000974!1.32e-07!23;UBERON:0004807!1.32e-07!23;UBERON:0005058!1.32e-07!23;UBERON:0003351!1.32e-07!23;UBERON:0009113!1.32e-07!23;UBERON:0003295!1.32e-07!23;UBERON:0009722!1.32e-07!23;UBERON:0005562!1.32e-07!23;UBERON:0007690!1.32e-07!23;UBERON:0000065!2.00e-07!41;UBERON:0000926!3.96e-07!193;UBERON:0004120!3.96e-07!193;UBERON:0006603!3.96e-07!193;UBERON:0001004!4.82e-07!42;UBERON:0003408!4.88e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.45e-09,134;UBERON:0004177,3.94e-09,29;UBERON:0005057,3.94e-09,29;UBERON:0002193,4.80e-08,48;UBERON:0002405,4.80e-08,48;UBERON:0000072,8.41e-08,27;UBERON:0002390,9.02e-08,45;UBERON:0003061,9.02e-08,45;UBERON:0000077,9.33e-08,35;UBERON:0007811,1.01e-07,36;UBERON:0002370,1.32e-07,23;UBERON:0000974,1.32e-07,23;UBERON:0004807,1.32e-07,23;UBERON:0005058,1.32e-07,23;UBERON:0003351,1.32e-07,23;UBERON:0009113,1.32e-07,23;UBERON:0003295,1.32e-07,23;UBERON:0009722,1.32e-07,23;UBERON:0005562,1.32e-07,23;UBERON:0007690,1.32e-07,23;UBERON:0000065,2.00e-07,41;UBERON:0000926,2.79e-07,120;UBERON:0004120,2.79e-07,120;UBERON:0006603,2.79e-07,120;UBERON:0000153,4.13e-07,43;UBERON:0001004,4.82e-07,42;UBERON:0003408,4.88e-07,24 | |||
|phase1_expression=15.6945870162698,6.63053274514786,4.09499315450582,4.83942738090928,5.00895729946347,11.7515490338323,11.2134067485852,18.9811285459117,46.7418557543534,43.0678728432468,54.1048779592596,49.3789664181132,20.7152883216759,20.1941129587884,20.6528052325711,34.4207954562704,46.8706458345858,20.5050407482854,21.526966076101,19.9463136345074,13.6069264241712,14.0000241193248,24.0303806007821,13.759348360233,14.9116032693661,3.44539178469012,12.4920978886132,12.2818602630957,8.36103045608045,7.56090389279792,11.7517170647311,25.4012269383852,17.221814052368,0,19.3530585233354,26.0988393212833,20.0085969137122,11.7188856606334,13.2827008569046,14.1351410872926,9.99993529652724,8.19654581950135,8.73918635456076,7.80560271448579,6.9950082541465,9.54443111240744,3.9119567217402,6.75877984779384,6.37089929929968,3.4997381833371,4.4795654920116,2.87505128729943,24.160695272314,15.9579671242496,14.7881271622684,8.48956138918625,5.15760191889762,7.73508138416164,11.9366711907163,5.81890077199236,7.60597684207415,7.45457970552091,5.33576877666684,4.49949858640699,2.96659908770092,1.4209602298922,4.79360176829448,4.61061966385865,15.4497522339632,10.9354810048669,13.2504725651371,5.99867067247988,4.63823935998388,15.0663683034393,11.5973019932066,5.51531271966013,6.60695285996332,9.95961237064464,11.8277030607307,10.0233578674947,9.69769022185542,9.89735404057844,7.53794097303729,6.75315132038016,10.2374826010463,7.36571463684169,12.2439645487229,10.8111678578674,27.564334373279,19.5730340676574,15.6526823898906,13.7667820317022,5.439770669662,5.93673510801599,6.49776417447669,7.16843019355737,6.17955448579708,12.7822741933543,12.7295142255406,13.4269038313929,14.6477156567748,11.5493829672886,15.2883143823987,14.2213340630666,19.0512116089868,19.5087096415826,17.6933555755174,11.7609396110632,12.1700805314171,12.7660239595749,13.8788261412909,11.5696881758614,10.3776973765226,11.9070886036572,14.2282335634203,14.0746582289237,6.92145909656247,10.5557530551536,15.0383793831479,15.3678507450039,16.5631138845295,19.3950101254089,13.0474232852686,9.36898550436951,14.0329293565015,7.66371165625774,21.2072770375479,19.7967901227825,24.3974835980284,14.8292733010774,10.5225138648284,12.942398267625,10.7771078519211,9.97290283588289,11.2205544062162,12.1680947300818,16.09061948835,12.8139179728396,10.6143558542143,11.1534183619831,18.0867415718158,13.7941262660084,14.7650946440386,10.8507468841715,14.2876648217788,15.8861013153214,16.1166966242734,16.815719098036,11.4251036254406,16.0740168142646,12.8444320639683,12.9325482132269,13.0682207136031,9.4028084960985,10.2891068203972,16.3208098791164,21.7686088067103,15.9555702411123,10.2298859782413,16.3629360303046,14.7751417788091,12.244220179349,10.8902578369197,10.6252685143598,9.87309522479221,9.53389173476672,13.9502168727802,12.4938916332871,13.1647879930784,12.9692296622485,10.133601193232,10.3801991071986,7.68425403518677,7.91817870686193,10.3042074796422,12.0398396483763,4.62586296177317,11.3713743665324,17.276348293354,14.3986736553472,12.5001437482431,7.86565746031036,9.78463392917429,10.6526350623033,7.59246498471219,7.90554982675252,11.0587491872119,8.75408476981064,10.3330966173134,15.2799299471218,9.07779809473716,8.96135729644652,12.5180814629034,18.3940105301663,11.270773567308,11.6081256871829,9.50367187121366,13.1855341393799,13.1531997218455,13.1373031701846,11.1469096767376,7.65062416315163,8.00422093135302,19.1871871573508,16.9040735797355,20.2375901146368,16.6345299538572,16.1588697034119,11.2035374783825,11.2201493605816,13.2950885955529,14.5517548989683,10.0637744569148,9.67566463938109,7.80094182786401,12.6289438973556,11.4814344654024,6.27176577772377,11.4546977903295,12.3169417650815,19.066902243717,17.4837438348444,15.2548661387526,10.2178817039508,10.2358765580986,11.7080188714679,12.2955412402829,13.730810758224,13.0752910299139,13.4367918066905,10.5337838938196,13.7416605652436,12.0633027151418,11.9659250440116,12.2941068254759,12.9690270763224,12.2018448390722,11.2523219128515,12.131185957874,6.81671503451807,8.83423014365519,9.76096860741596,10.1248996934415,11.4705023017225,11.1399337041197,11.0399847007645,11.334699646897,8.76767573733936,13.0444966722353,8.9969968598106,12.9165477539524,6.7664929393557,14.0082785044075,11.71287873105,7.96470830039777,13.352934988524,12.6975893925195,12.8251454234011,5.31543407185391,8.60818414242997,12.9214146584111,15.9954840970102,13.1904030002347,14.8537276229834,13.7044191147498,13.4076206222643,14.9793426531667,14.5849486165361,8.27895576209629,9.43082954139006,11.5271151867478,8.20496560969525,10.86023535974,10.9607381681256,11.4989136951218,14.6164128896036,9.04166432025344,9.56340267060584,10.0107944551461,17.0685577546681,14.2053089363732,14.4443991775654,9.61886760878507,8.52956389248344,16.0618627949982,10.3193433981611,15.3711457716861,24.4878994106098,24.3315725343425,19.2173665493479,25.836721359066,20.2929605869304,24.7377953109919,7.63736494412091,19.1383276116587,11.58920962623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| |||
|short_description=p2@Srsf10 | |||
}} |
Latest revision as of 12:43, 26 September 2015
Short description: | p2@Srsf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srsf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000154447, ENSMUST00000171299, NM_001080387, NM_010178, uc008vha.1, uc008vhb.1, uc008vhc.1_5end |
EntrezGene: | Srsf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.43e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.43e-09 | 32 |
hematopoietic stem cell | 3.43e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.43e-09 | 32 |
lymphocyte | 2.46e-07 | 13 |
common lymphoid progenitor | 2.46e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 4.17e-07 | 25 |
lymphoid lineage restricted progenitor cell | 5.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primordium | 1.45e-09 | 134 |
hemopoietic organ | 3.94e-09 | 29 |
immune organ | 3.94e-09 | 29 |
hemolymphoid system | 4.80e-08 | 48 |
immune system | 4.80e-08 | 48 |
segment of respiratory tract | 8.41e-08 | 27 |
hematopoietic system | 9.02e-08 | 45 |
blood island | 9.02e-08 | 45 |
mixed endoderm/mesoderm-derived structure | 9.33e-08 | 35 |
craniocervical region | 1.01e-07 | 36 |
thymus | 1.32e-07 | 23 |
neck | 1.32e-07 | 23 |
respiratory system epithelium | 1.32e-07 | 23 |
hemolymphoid system gland | 1.32e-07 | 23 |
pharyngeal epithelium | 1.32e-07 | 23 |
thymic region | 1.32e-07 | 23 |
pharyngeal gland | 1.32e-07 | 23 |
entire pharyngeal arch endoderm | 1.32e-07 | 23 |
thymus primordium | 1.32e-07 | 23 |
early pharyngeal endoderm | 1.32e-07 | 23 |
respiratory tract | 2.00e-07 | 41 |
mesoderm | 2.79e-07 | 120 |
mesoderm-derived structure | 2.79e-07 | 120 |
presumptive mesoderm | 2.79e-07 | 120 |
anterior region of body | 4.13e-07 | 43 |
respiratory system | 4.82e-07 | 42 |
gland of gut | 4.88e-07 | 24 |