FFCP PHASE1:Mm9::chr4:136358059..136358074,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=61|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:136358059..136358074,+|id=chr4:136358059..136358074,+|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9;CL:0000239!2.36e-07!6;CL:0000677!2.36e-07!6;CL:0000212!2.36e-07!6;CL:0000584!2.36e-07!6|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.30e-17!59;UBERON:0000160!8.96e-16!43;UBERON:0000344!5.66e-14!15;UBERON:0001242!8.22e-12!13;UBERON:0000060!8.22e-12!13;UBERON:0001262!8.22e-12!13;UBERON:0004786!8.22e-12!13;UBERON:0004923!4.45e-08!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128;UBERON:0004119!9.52e-07!130;UBERON:0000925!9.52e-07!130;UBERON:0006595!9.52e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.16e-43,31;UBERON:0005409,2.33e-30,47;UBERON:0000344,2.58e-17,15;UBERON:0002108,1.03e-13,4;UBERON:0001007,1.29e-12,116;UBERON:0001555,1.29e-12,116;UBERON:0007026,1.29e-12,116;UBERON:0004119,2.48e-12,118;UBERON:0000925,2.48e-12,118;UBERON:0006595,2.48e-12,118;UBERON:0001242,3.00e-12,13;UBERON:0001262,3.00e-12,13;UBERON:0004786,3.00e-12,13;UBERON:0000331,1.88e-10,3;UBERON:0002116,1.88e-10,3;UBERON:0001204,1.88e-10,3;UBERON:0001168,1.88e-10,3;UBERON:0004923,2.61e-10,24;UBERON:0004921,2.75e-10,114;UBERON:0001155,5.70e-08,2;UBERON:0000059,5.70e-08,2;UBERON:0001962,6.70e-08,2;UBERON:0001961,6.70e-08,2;UBERON:0001744,6.70e-08,2|phase1_expression=0,2.09385244583617,0.909998478779072,1.20985684522732,0.500895729946347,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0,1.91990907352088,1.14704640533585,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.00812051903972,1.10865255327652,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.758168275301024,2.73574412652416,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.96502539580558,1.05780226665418,0,0,0,1.21010114774006,4.44756087689741,5.89699440948933,1.42358718463353,7.41145296258049,18.5988054512199,15.9165177632921,18.3266241891973,0,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p@chr4:136358059..136358074,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:136358059..136358074,+ | |||
|description=CAGE_peak_at_chr4:136358059..136358074,+ | |||
|id=chr4:136358059..136358074,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9;CL:0000239!2.36e-07!6;CL:0000677!2.36e-07!6;CL:0000212!2.36e-07!6;CL:0000584!2.36e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.30e-17!59;UBERON:0000160!8.96e-16!43;UBERON:0000344!5.66e-14!15;UBERON:0001242!8.22e-12!13;UBERON:0000060!8.22e-12!13;UBERON:0001262!8.22e-12!13;UBERON:0004786!8.22e-12!13;UBERON:0004923!4.45e-08!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128;UBERON:0004119!9.52e-07!130;UBERON:0000925!9.52e-07!130;UBERON:0006595!9.52e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.16e-43,31;UBERON:0005409,2.33e-30,47;UBERON:0000344,2.58e-17,15;UBERON:0002108,1.03e-13,4;UBERON:0001007,1.29e-12,116;UBERON:0001555,1.29e-12,116;UBERON:0007026,1.29e-12,116;UBERON:0004119,2.48e-12,118;UBERON:0000925,2.48e-12,118;UBERON:0006595,2.48e-12,118;UBERON:0001242,3.00e-12,13;UBERON:0001262,3.00e-12,13;UBERON:0004786,3.00e-12,13;UBERON:0000331,1.88e-10,3;UBERON:0002116,1.88e-10,3;UBERON:0001204,1.88e-10,3;UBERON:0001168,1.88e-10,3;UBERON:0004923,2.61e-10,24;UBERON:0004921,2.75e-10,114;UBERON:0001155,5.70e-08,2;UBERON:0000059,5.70e-08,2;UBERON:0001962,6.70e-08,2;UBERON:0001961,6.70e-08,2;UBERON:0001744,6.70e-08,2 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,1.20985684522732,0.500895729946347,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0,1.91990907352088,1.14704640533585,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.00812051903972,1.10865255327652,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.758168275301024,2.73574412652416,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,3.96502539580558,1.05780226665418,0,0,0,1.21010114774006,4.44756087689741,5.89699440948933,1.42358718463353,7.41145296258049,18.5988054512199,15.9165177632921,18.3266241891973,0,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32585463851399,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0,0.320125762024346,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p@chr4:136358059..136358074,+ | |||
}} |
Latest revision as of 23:46, 4 August 2015
Short description: | p@chr4:136358059..136358074, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:136358059..136358074, + |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.16e-43 | 31 |
gastrointestinal system | 2.33e-30 | 47 |
mucosa | 2.58e-17 | 15 |
small intestine | 1.03e-13 | 4 |
digestive system | 1.29e-12 | 116 |
digestive tract | 1.29e-12 | 116 |
primitive gut | 1.29e-12 | 116 |
endoderm-derived structure | 2.48e-12 | 118 |
endoderm | 2.48e-12 | 118 |
presumptive endoderm | 2.48e-12 | 118 |
intestinal mucosa | 3.00e-12 | 13 |
wall of intestine | 3.00e-12 | 13 |
gastrointestinal system mucosa | 3.00e-12 | 13 |
ileal mucosa | 1.88e-10 | 3 |
ileum | 1.88e-10 | 3 |
mucosa of small intestine | 1.88e-10 | 3 |
wall of small intestine | 1.88e-10 | 3 |
organ component layer | 2.61e-10 | 24 |
subdivision of digestive tract | 2.75e-10 | 114 |
colon | 5.70e-08 | 2 |
large intestine | 5.70e-08 | 2 |
gut-associated lymphoid tissue | 6.70e-08 | 2 |
mucosa-associated lymphoid tissue | 6.70e-08 | 2 |
lymphoid tissue | 6.70e-08 | 2 |