FFCP PHASE1:Mm9::chr4:87679232..87679277,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70122|HGNC=|UniProt=A2AM29|association_with_transcript=0bp_to_ENSMUST00000078090_5end|description=CAGE_peak_1_at_Mllt3_5end|id=chr4:87679232..87679277,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!7.82e-14!94;UBERON:0007811!7.32e-13!86;UBERON:0000955!2.67e-09!50;UBERON:0006238!2.67e-09!50;UBERON:0000033!4.67e-09!63;UBERON:0002616!8.47e-09!49;UBERON:0003080!2.75e-08!40;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0001004!6.37e-08!42;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0003056!8.53e-08!49;UBERON:0000065!1.39e-07!41;UBERON:0002791!2.17e-07!29;UBERON:0003528!2.17e-07!29;UBERON:0001893!2.17e-07!29;UBERON:0000477!3.45e-07!154;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71;UBERON:0000475!5.90e-07!200;UBERON:0000481!6.96e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.51e-09,47;UBERON:0006238,2.51e-09,47;UBERON:0002616,8.11e-09,46;UBERON:0003080,2.75e-08,40;UBERON:0001049,4.59e-08,52;UBERON:0005068,4.59e-08,52;UBERON:0006241,4.59e-08,52;UBERON:0007135,4.59e-08,52;UBERON:0001004,6.25e-08,42;UBERON:0002780,8.26e-08,39;UBERON:0001890,8.26e-08,39;UBERON:0006240,8.26e-08,39;UBERON:0003056,8.53e-08,49;UBERON:0000073,1.00e-07,54;UBERON:0000065,1.36e-07,41;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0010314,5.14e-07,92;UBERON:0002346,6.98e-07,64;UBERON:0003075,6.98e-07,64;UBERON:0007284,6.98e-07,64|phase1_expression=11.2104192973356,3.14077866875425,3.18499467572675,6.95667686005709,6.51164448930251,9.56911849897772,7.00837921786577,31.6352142431862,14.36044965947,14.0438715793196,4.45166717386313,5.34473465268754,29.960127737961,34.443638553085,5.66286595086627,7.89653542820321,1.39912375625629,7.41336088591859,8.36398044995006,5.94145512517242,11.0556277196391,7.04965753526286,7.31359409589019,5.43974237497583,3.44113921600755,5.16808767703518,7.75371593086335,6.24866574789078,4.75058548640935,5.79669298447841,4.43461021310609,5.71527606113668,7.38077745101484,0,6.06588401477677,7.97926297720763,7.35009682544529,0,0,0,0.588231488031014,0,0.485510353031154,9.9458486200706,8.41428529121971,11.9305388905093,3.9119567217402,5.23260375313072,5.71184075109627,11.665793944457,8.11921245427103,4.31257693094915,5.36904339384756,35.5427449585559,25.5431287348273,8.7468208252222,9.45560351797897,8.76642556871652,10.5204559646991,12.1667925232568,12.0427966666174,3.72728985276045,8.89294796111139,0.449949858640699,0,0.7104801149461,3.29560121570245,1.53687322128622,21.4637497478549,19.3058491814318,15.7743721013537,4.57041575046086,5.74258206474195,12.6165523191403,11.9806838772795,17.4651569455904,9.91042928994498,10.5980490610706,12.2885226604995,13.58428763621,13.174220678747,17.1901412283731,7.81712397203867,10.1297269805702,12.9878510610289,9.42811473515737,10.3931326983345,12.6751623161204,6.13382165998791,8.91744409260069,6.08715426273523,1.72084775396277,0.679971333707751,3.2382191498269,1.94932925234301,1.34408066129201,7.72444310724635,8.01022516116871,5.19572009205738,6.36011234118612,9.29566570526091,11.5493829672886,0,7.11066703153331,5.41227602528035,6.08063677140237,9.0994400102661,6.62266502370548,26.6706020156587,13.8051189330287,6.93941307064543,14.3098774806706,10.1470818792666,10.399862198131,10.8181610564848,9.67632753238501,5.19109432242185,7.95296463059514,6.19227386364912,5.3383060482645,10.8212344045593,12.6067565815158,16.775258509631,38.9398460025358,36.6531736923546,9.70736809792647,1.91704199209472,1.19980546198682,3.04968544975355,21.5698520742945,20.5875271268382,21.4868942112998,23.1186345855728,19.9458056717658,15.9996794310861,15.5751612545047,10.4894544765826,9.20611582514688,5.55990068554084,10.7325346502102,10.2795149940536,7.58676944630461,9.90341713929421,11.3028613376786,10.0694018743965,9.48041530107888,10.4008914261299,16.298312356558,11.4251036254406,12.6701073712439,10.9089696981648,5.47989331068937,12.2340789659263,11.4923214952315,14.1989674121481,9.75267907410617,2.1066395619397,1.02939162845886,1.98914449576915,12.0132948070591,11.0227248191115,12.9644684251931,12.7842157216014,11.4123254413494,13.2669717083145,9.06882384526591,8.58474884478781,8.75740067753771,9.05079174524142,12.9692296622485,9.8903947645944,7.60239934611728,12.0752563410078,11.8101648509127,23.9730541363105,23.4622516224768,10.9038198384653,7.66906643324278,14.2903127858607,16.0243303583703,14.3042882067524,13.3111126251406,12.6755484991576,10.8428606884159,9.96511029243474,9.88193728344065,7.79139147280835,9.74886713001639,10.7230247915516,8.98819408654222,12.9682829924817,14.3381716743144,5.12103332573321,13.2528274627285,15.7790829942313,10.997171703647,10.2794818198842,11.7126819216832,13.7223285559638,8.41377843483732,7.69293766422737,6.16985819609003,4.74324203339438,7.67487486294033,7.66580080941492,6.52100125916076,6.8972441272091,2.894125917029,3.31013607315846,3.74004978686054,3.40483976227574,2.19649130550465,4.31304619582064,4.09355042435354,3.74445207737473,3.03094653536534,2.87035861635059,6.75420929908714,14.7802552133284,10.8010104709176,13.2001630918041,15.2770577197669,24.6424760702927,24.2884073290633,14.9967493758189,16.7814937157707,17.0245955634686,16.1669223443606,16.9022054776936,20.3190510247515,16.0597033135283,14.0309586824066,1.50791283939272,2.71952841909355,9.34352118736169,9.65778612066564,16.8578119487182,14.2998257642488,26.0656563148914,14.1383719234449,5.99465616890888,6.24701990874622,8.61693590931196,5.01834475700359,10.0259403337077,6.51076020814315,7.2865926301481,7.3063964477828,5.92931666919785,25.3843839973228,16.6069899693674,8.01295216502649,12.2165219515182,21.4461159864296,14.6019652173959,7.28341908464944,6.04647113929502,11.6935149448657,7.67784921490009,7.99331384654211,8.78656196771952,11.2695456138027,14.2598951353889,9.16506598013866,13.7044191147498,7.21948802737308,9.53230896110606,13.8647042404109,10.6074120701859,12.4315480318324,15.4286003268778,12.3074484145429,9.87294123612726,3.34911444026059,17.3657063967146,4.02480934641258,5.73373834942901,8.90385765883992,13.2400829890643,11.5197686612778,8.35606408021955,7.71462228801788,10.7847909553045,16.6882771809459,15.3783792718067,6.3979929068599,6.85219751267933,8.2882121082064,17.4968611482912,12.5827995263587,7.13909405974192,7.69732987780119,7.46279858543889,10.5013767981662,14.7096237015228,12.8091264289915,17.1728491906664,16.517975385143,17.6873676634404,14.0258920240214,12.6459787259764,15.1818446350737,11.6653475962614,15.5334828271731,1.12738587736838,4.18646328923141,4.96375471371293,7.77804753376191,4.90807329215378,4.89972763923257,5.75050469364194,7.55185432094911,8.80818493175971,4.34851417486811,4.32045009386798,27.8089786152797,5.27085559754427,9.14127518766963,10.6535074841792,13.0689487837261,15.0997829633761,17.3081447308755,18.0181223152984,18.476860340511,19.127908470405,23.391674951747,27.8729538915692,27.0355275009326,30.7386252737526,9.9761368790693,1.99787358036658,2.51198798506532,1.00730769818447,16.227925898704,12.7624083306804,15.7510396869848,15.2201549146137,6.01886524842436,15.2482997506608,12.889106622201,12.6037012956667,12.2015759464018,13.0165678756422,12.0863023582352,14.1754725048679,16.2115633160719,11.7817026335893,10.8729665467882,13.0772057956063,12.369771075432,11.0976843740187,8.99494853152688,8.80375283037526,6.06683577885047,9.11211583986622,10.5077879191836,10.9112531261217,9.8551912587881,10.1391719956096,10.3744487762342,9.64507526939789,10.308049537184,11.429658322167,10.9547548995107,12.051969898265,10.2241886845764,9.89006161927936,11.0399190100798,10.6289468239479,8.5188386956482,11.921809497366,9.01147783120437,9.88148494360971,11.4229720653763,8.04883080640199,8.68130047744881,11.1359373353607,12.3451299764702,10.6771516311757,10.3429706494342,8.18462086339379,8.6764631064141,9.64533054905707,12.2407183189594,11.2287172053796,7.73535794573874,5.16478496585877,7.72069966918304,8.81097775357602|short_description=p1@Mllt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70122 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AM29 | |||
|association_with_transcript=0bp_to_ENSMUST00000078090_5end | |||
|cluster_id=chr4:87679232..87679277,- | |||
|description=CAGE_peak_1_at_Mllt3_5end | |||
|id=chr4:87679232..87679277,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.82e-14!94;UBERON:0007811!7.32e-13!86;UBERON:0000955!2.67e-09!50;UBERON:0006238!2.67e-09!50;UBERON:0000033!4.67e-09!63;UBERON:0002616!8.47e-09!49;UBERON:0003080!2.75e-08!40;UBERON:0001049!4.59e-08!52;UBERON:0005068!4.59e-08!52;UBERON:0006241!4.59e-08!52;UBERON:0007135!4.59e-08!52;UBERON:0001004!6.37e-08!42;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0003056!8.53e-08!49;UBERON:0000065!1.39e-07!41;UBERON:0002791!2.17e-07!29;UBERON:0003528!2.17e-07!29;UBERON:0001893!2.17e-07!29;UBERON:0000477!3.45e-07!154;UBERON:0002346!5.69e-07!71;UBERON:0003075!5.69e-07!71;UBERON:0007284!5.69e-07!71;UBERON:0000475!5.90e-07!200;UBERON:0000481!6.96e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.51e-09,47;UBERON:0006238,2.51e-09,47;UBERON:0002616,8.11e-09,46;UBERON:0003080,2.75e-08,40;UBERON:0001049,4.59e-08,52;UBERON:0005068,4.59e-08,52;UBERON:0006241,4.59e-08,52;UBERON:0007135,4.59e-08,52;UBERON:0001004,6.25e-08,42;UBERON:0002780,8.26e-08,39;UBERON:0001890,8.26e-08,39;UBERON:0006240,8.26e-08,39;UBERON:0003056,8.53e-08,49;UBERON:0000073,1.00e-07,54;UBERON:0000065,1.36e-07,41;UBERON:0003528,2.17e-07,29;UBERON:0002791,2.17e-07,29;UBERON:0001893,2.17e-07,29;UBERON:0010314,5.14e-07,92;UBERON:0002346,6.98e-07,64;UBERON:0003075,6.98e-07,64;UBERON:0007284,6.98e-07,64 | |||
|phase1_expression=11.2104192973356,3.14077866875425,3.18499467572675,6.95667686005709,6.51164448930251,9.56911849897772,7.00837921786577,31.6352142431862,14.36044965947,14.0438715793196,4.45166717386313,5.34473465268754,29.960127737961,34.443638553085,5.66286595086627,7.89653542820321,1.39912375625629,7.41336088591859,8.36398044995006,5.94145512517242,11.0556277196391,7.04965753526286,7.31359409589019,5.43974237497583,3.44113921600755,5.16808767703518,7.75371593086335,6.24866574789078,4.75058548640935,5.79669298447841,4.43461021310609,5.71527606113668,7.38077745101484,0,6.06588401477677,7.97926297720763,7.35009682544529,0,0,0,0.588231488031014,0,0.485510353031154,9.9458486200706,8.41428529121971,11.9305388905093,3.9119567217402,5.23260375313072,5.71184075109627,11.665793944457,8.11921245427103,4.31257693094915,5.36904339384756,35.5427449585559,25.5431287348273,8.7468208252222,9.45560351797897,8.76642556871652,10.5204559646991,12.1667925232568,12.0427966666174,3.72728985276045,8.89294796111139,0.449949858640699,0,0.7104801149461,3.29560121570245,1.53687322128622,21.4637497478549,19.3058491814318,15.7743721013537,4.57041575046086,5.74258206474195,12.6165523191403,11.9806838772795,17.4651569455904,9.91042928994498,10.5980490610706,12.2885226604995,13.58428763621,13.174220678747,17.1901412283731,7.81712397203867,10.1297269805702,12.9878510610289,9.42811473515737,10.3931326983345,12.6751623161204,6.13382165998791,8.91744409260069,6.08715426273523,1.72084775396277,0.679971333707751,3.2382191498269,1.94932925234301,1.34408066129201,7.72444310724635,8.01022516116871,5.19572009205738,6.36011234118612,9.29566570526091,11.5493829672886,0,7.11066703153331,5.41227602528035,6.08063677140237,9.0994400102661,6.62266502370548,26.6706020156587,13.8051189330287,6.93941307064543,14.3098774806706,10.1470818792666,10.399862198131,10.8181610564848,9.67632753238501,5.19109432242185,7.95296463059514,6.19227386364912,5.3383060482645,10.8212344045593,12.6067565815158,16.775258509631,38.9398460025358,36.6531736923546,9.70736809792647,1.91704199209472,1.19980546198682,3.04968544975355,21.5698520742945,20.5875271268382,21.4868942112998,23.1186345855728,19.9458056717658,15.9996794310861,15.5751612545047,10.4894544765826,9.20611582514688,5.55990068554084,10.7325346502102,10.2795149940536,7.58676944630461,9.90341713929421,11.3028613376786,10.0694018743965,9.48041530107888,10.4008914261299,16.298312356558,11.4251036254406,12.6701073712439,10.9089696981648,5.47989331068937,12.2340789659263,11.4923214952315,14.1989674121481,9.75267907410617,2.1066395619397,1.02939162845886,1.98914449576915,12.0132948070591,11.0227248191115,12.9644684251931,12.7842157216014,11.4123254413494,13.2669717083145,9.06882384526591,8.58474884478781,8.75740067753771,9.05079174524142,12.9692296622485,9.8903947645944,7.60239934611728,12.0752563410078,11.8101648509127,23.9730541363105,23.4622516224768,10.9038198384653,7.66906643324278,14.2903127858607,16.0243303583703,14.3042882067524,13.3111126251406,12.6755484991576,10.8428606884159,9.96511029243474,9.88193728344065,7.79139147280835,9.74886713001639,10.7230247915516,8.98819408654222,12.9682829924817,14.3381716743144,5.12103332573321,13.2528274627285,15.7790829942313,10.997171703647,10.2794818198842,11.7126819216832,13.7223285559638,8.41377843483732,7.69293766422737,6.16985819609003,4.74324203339438,7.67487486294033,7.66580080941492,6.52100125916076,6.8972441272091,2.894125917029,3.31013607315846,3.74004978686054,3.40483976227574,2.19649130550465,4.31304619582064,4.09355042435354,3.74445207737473,3.03094653536534,2.87035861635059,6.75420929908714,14.7802552133284,10.8010104709176,13.2001630918041,15.2770577197669,24.6424760702927,24.2884073290633,14.9967493758189,16.7814937157707,17.0245955634686,16.1669223443606,16.9022054776936,20.3190510247515,16.0597033135283,14.0309586824066,1.50791283939272,2.71952841909355,9.34352118736169,9.65778612066564,16.8578119487182,14.2998257642488,26.0656563148914,14.1383719234449,5.99465616890888,6.24701990874622,8.61693590931196,5.01834475700359,10.0259403337077,6.51076020814315,7.2865926301481,7.3063964477828,5.92931666919785,25.3843839973228,16.6069899693674,8.01295216502649,12.2165219515182,21.4461159864296,14.6019652173959,7.28341908464944,6.04647113929502,11.6935149448657,7.67784921490009,7.99331384654211,8.78656196771952,11.2695456138027,14.2598951353889,9.16506598013866,13.7044191147498,7.21948802737308,9.53230896110606,13.8647042404109,10.6074120701859,12.4315480318324,15.4286003268778,12.3074484145429,9.87294123612726,3.34911444026059,17.3657063967146,4.02480934641258,5.73373834942901,8.90385765883992,13.2400829890643,11.5197686612778,8.35606408021955,7.71462228801788,10.7847909553045,16.6882771809459,15.3783792718067,6.3979929068599,6.85219751267933,8.2882121082064,17.4968611482912,12.5827995263587,7.13909405974192,7.69732987780119,7.46279858543889,10.5013767981662,14.7096237015228,12.8091264289915,17.1728491906664,16.517975385143,17.6873676634404,14.0258920240214,12.6459787259764,15.1818446350737,11.6653475962614,15.5334828271731,1.12738587736838,4.18646328923141,4.96375471371293,7.77804753376191,4.90807329215378,4.89972763923257,5.75050469364194,7.55185432094911,8.80818493175971,4.34851417486811,4.32045009386798,27.8089786152797,5.27085559754427,9.14127518766963,10.6535074841792,13.0689487837261,15.0997829633761,17.3081447308755,18.0181223152984,18.476860340511,19.127908470405,23.391674951747,27.8729538915692,27.0355275009326,30.7386252737526,9.9761368790693,1.99787358036658,2.51198798506532,1.00730769818447,16.227925898704,12.7624083306804,15.7510396869848,15.2201549146137,6.01886524842436,15.2482997506608,12.889106622201,12.6037012956667,12.2015759464018,13.0165678756422,12.0863023582352,14.1754725048679,16.2115633160719,11.7817026335893,10.8729665467882,13.0772057956063,12.369771075432,11.0976843740187,8.99494853152688,8.80375283037526,6.06683577885047,9.11211583986622,10.5077879191836,10.9112531261217,9.8551912587881,10.1391719956096,10.3744487762342,9.64507526939789,10.308049537184,11.429658322167,10.9547548995107,12.051969898265,10.2241886845764,9.89006161927936,11.0399190100798,10.6289468239479,8.5188386956482,11.921809497366,9.01147783120437,9.88148494360971,11.4229720653763,8.04883080640199,8.68130047744881,11.1359373353607,12.3451299764702,10.6771516311757,10.3429706494342,8.18462086339379,8.6764631064141,9.64533054905707,12.2407183189594,11.2287172053796,7.73535794573874,5.16478496585877,7.72069966918304,8.81097775357602 | |||
|short_description=p1@Mllt3 | |||
}} |
Latest revision as of 06:44, 27 September 2015
Short description: | p1@Mllt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mllt3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000078090_5end |
EntrezGene: | Mllt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 2.51e-09 | 47 |
future brain | 2.51e-09 | 47 |
regional part of brain | 8.11e-09 | 46 |
anterior neural tube | 2.75e-08 | 40 |
neural tube | 4.59e-08 | 52 |
neural rod | 4.59e-08 | 52 |
future spinal cord | 4.59e-08 | 52 |
neural keel | 4.59e-08 | 52 |
respiratory system | 6.25e-08 | 42 |
regional part of forebrain | 8.26e-08 | 39 |
forebrain | 8.26e-08 | 39 |
future forebrain | 8.26e-08 | 39 |
pre-chordal neural plate | 8.53e-08 | 49 |
regional part of nervous system | 1.00e-07 | 54 |
respiratory tract | 1.36e-07 | 41 |
brain grey matter | 2.17e-07 | 29 |
regional part of telencephalon | 2.17e-07 | 29 |
telencephalon | 2.17e-07 | 29 |
structure with developmental contribution from neural crest | 5.14e-07 | 92 |
neurectoderm | 6.98e-07 | 64 |
neural plate | 6.98e-07 | 64 |
presumptive neural plate | 6.98e-07 | 64 |