Personal tools

FFCP PHASE1:Mm9::chr5:113919535..113919568,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=320916|HGNC=|MCL_coexpression_id=30|UniProt=D4PHA7,Q8C7Q3|association_with_transcript=68bp_to_ENSMUST00000094452,NM_177292,uc008yyh.2,uc008yyi.2_5end|description=CAGE_peak_1_at_Wscd2_5end|id=chr5:113919535..113919568,+|ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.42e-08,23;CL:0000337,5.42e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.62e-12!52;UBERON:0005068!4.62e-12!52;UBERON:0006241!4.62e-12!52;UBERON:0007135!4.62e-12!52;UBERON:0000033!1.95e-11!63;UBERON:0002346!3.28e-11!71;UBERON:0003075!3.28e-11!71;UBERON:0007284!3.28e-11!71;UBERON:0000955!7.17e-11!50;UBERON:0006238!7.17e-11!50;UBERON:0002020!7.74e-11!34;UBERON:0002616!1.41e-10!49;UBERON:0001017!2.15e-09!73;UBERON:0005743!2.15e-09!73;UBERON:0004121!4.78e-09!102;UBERON:0000924!4.78e-09!102;UBERON:0006601!4.78e-09!102;UBERON:0002791!1.29e-08!29;UBERON:0003528!1.29e-08!29;UBERON:0001893!1.29e-08!29;UBERON:0000073!1.61e-08!75;UBERON:0001016!1.61e-08!75;UBERON:0003056!3.95e-08!49;UBERON:0003080!7.00e-08!40;UBERON:0000468!1.50e-07!333;UBERON:0002780!2.25e-07!39;UBERON:0001890!2.25e-07!39;UBERON:0006240!2.25e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.56e-14,54;UBERON:0001049,9.39e-13,52;UBERON:0005068,9.39e-13,52;UBERON:0006241,9.39e-13,52;UBERON:0007135,9.39e-13,52;UBERON:0002020,8.07e-12,34;UBERON:0001017,1.26e-11,73;UBERON:0001016,5.66e-11,75;UBERON:0002346,3.70e-10,64;UBERON:0003075,3.70e-10,64;UBERON:0007284,3.70e-10,64;UBERON:0010371,6.29e-10,73;UBERON:0000955,1.32e-09,47;UBERON:0006238,1.32e-09,47;UBERON:0002616,3.20e-09,46;UBERON:0003528,9.50e-09,29;UBERON:0002791,9.50e-09,29;UBERON:0001893,9.50e-09,29;UBERON:0004121,9.64e-09,95;UBERON:0000924,9.64e-09,95;UBERON:0006601,9.64e-09,95;UBERON:0011216,5.06e-08,194;UBERON:0003080,2.33e-07,40;UBERON:0003076,2.77e-07,12;UBERON:0003057,2.77e-07,12;UBERON:0002780,1.00e-06,39;UBERON:0001890,1.00e-06,39;UBERON:0006240,1.00e-06,39|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,0.439372365468944,1.36100929351998,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,2.57085885963423,1.32521124570968,0.857435594504678,0.670918297127655,2.75765635983006,2.20231761998777,1.78762273319263,1.22885226604995,1.18697658957174,1.00636407962651,1.56274011167028,2.51264699101243,1.12552522006336,2.13917546887534,2.65165726926301,1.99320353118744,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,9.85903938436764,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,1.52232739156071,0.691846491768175,0.904335843315735,1.05829836422134,0.125666591329675,0,1.73519228303894,0,1.29413479957927,1.10420759230197,1.45462575940567,0,15.2246014446005,19.6879904404648,0.510914110417183,0,0,0,2.84602214869163,3.20250421973039,0.753926112677186,2.08589184230732,2.55715457330331,2.0778804455956,3.24482526135515,1.01839363850316,0.746441823660558,0,3.36706969418358,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.612328492361951,0.384341160854549,0.562210347358373,1.81092359517311,1.07783996466421,0.756424320671277,1.75951124163949,0.876782929710299,1.66828349535359,0.696504333044333,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,2.11073453982987,0.720248245844059,0.946978942340841,0.983821158737019,0.617068451549513,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0,5.67782861123144,2.26390147234426,0,0.264450566663544,0.639864751605702,0.232236671860439,1.67527699718721,2.21851877085677,1.77902435075896,2.28270751335071,1.42358718463353,1.4822905925161,1.75934646160189,1.1937388322469,1.36474860983384,3.59527763461689,1.51296634912286,0.398282546508734,1.13800740571849,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.822074982615345,0.295220295959204,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.51593129416388,2.11854469374634,1.01847051465113,1.17345124144251,1.34005005953453,0.476087281772027,1.36593553500459,1.57635144106191,1.32878813789265,1.2756381492599,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,0.703270119553219,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,1.28528526568723,0.709700426041343,1.24645922567079,0.488660878060728,0.659880491890142,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0,0.356497378384721,1.26414703174326,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.713475270408282,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,1.13025098687134,0.482503399425247,0.954978752025092,0.328281799490123,1.45740418314925,2.22510362412612,0.170870880797853,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.949007980743406,0.406638934253697,2.70013352054503,1.04544148007234,1.9652630737156,3.9110660451598,3.38879168473877,2.35580347785627,1.42576470620972,0,0,0,0.66183396182839,1.75006069509643,1.42075805825504,1.01373675294467,0.469428954583016,0.5208175393758,0.314578033277133,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,5.02292944483695,1.87682475451182,0.36630324853453,0.857473516316263,0.501572104035363,1.6942555278512,2.30162618253588,2.86447756719698,1.89038500578056,0,4.5323633843382,1.35004500046361,0.45032120322422,1.81256963593682,2.5888015587591,0.830298780673413,0.798049746802062,1.87806966329548,0.972426868273176,0.628839487883947,0.735374033800057,0.222246727801615,1.23621034343337,1.92551525755089,1.01078884705519,0.50695859978048,1.32038438970253,0.468207537349412,0.448176066834085,0.689225627467359,0.952587382566147,0.579421629724277,0.38581844092741,0,1.17759136107518,1.02860775715625,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,2.10455769150274,0.135804113845862,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,1.54325288784913,0.749431733813838,0.701794825336225,1.50409737833809,0.765153328275374,1.54413993383661,0.927471342481686|short_description=p1@Wscd2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320916
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=D4PHA7,Q8C7Q3
|association_with_transcript=68bp_to_ENSMUST00000094452,NM_177292,uc008yyh.2,uc008yyi.2_5end
|cluster_id=chr5:113919535..113919568,+
|description=CAGE_peak_1_at_Wscd2_5end
|id=chr5:113919535..113919568,+
|ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.42e-08,23;CL:0000337,5.42e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.62e-12!52;UBERON:0005068!4.62e-12!52;UBERON:0006241!4.62e-12!52;UBERON:0007135!4.62e-12!52;UBERON:0000033!1.95e-11!63;UBERON:0002346!3.28e-11!71;UBERON:0003075!3.28e-11!71;UBERON:0007284!3.28e-11!71;UBERON:0000955!7.17e-11!50;UBERON:0006238!7.17e-11!50;UBERON:0002020!7.74e-11!34;UBERON:0002616!1.41e-10!49;UBERON:0001017!2.15e-09!73;UBERON:0005743!2.15e-09!73;UBERON:0004121!4.78e-09!102;UBERON:0000924!4.78e-09!102;UBERON:0006601!4.78e-09!102;UBERON:0002791!1.29e-08!29;UBERON:0003528!1.29e-08!29;UBERON:0001893!1.29e-08!29;UBERON:0000073!1.61e-08!75;UBERON:0001016!1.61e-08!75;UBERON:0003056!3.95e-08!49;UBERON:0003080!7.00e-08!40;UBERON:0000468!1.50e-07!333;UBERON:0002780!2.25e-07!39;UBERON:0001890!2.25e-07!39;UBERON:0006240!2.25e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.56e-14,54;UBERON:0001049,9.39e-13,52;UBERON:0005068,9.39e-13,52;UBERON:0006241,9.39e-13,52;UBERON:0007135,9.39e-13,52;UBERON:0002020,8.07e-12,34;UBERON:0001017,1.26e-11,73;UBERON:0001016,5.66e-11,75;UBERON:0002346,3.70e-10,64;UBERON:0003075,3.70e-10,64;UBERON:0007284,3.70e-10,64;UBERON:0010371,6.29e-10,73;UBERON:0000955,1.32e-09,47;UBERON:0006238,1.32e-09,47;UBERON:0002616,3.20e-09,46;UBERON:0003528,9.50e-09,29;UBERON:0002791,9.50e-09,29;UBERON:0001893,9.50e-09,29;UBERON:0004121,9.64e-09,95;UBERON:0000924,9.64e-09,95;UBERON:0006601,9.64e-09,95;UBERON:0011216,5.06e-08,194;UBERON:0003080,2.33e-07,40;UBERON:0003076,2.77e-07,12;UBERON:0003057,2.77e-07,12;UBERON:0002780,1.00e-06,39;UBERON:0001890,1.00e-06,39;UBERON:0006240,1.00e-06,39
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,0.439372365468944,1.36100929351998,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,2.57085885963423,1.32521124570968,0.857435594504678,0.670918297127655,2.75765635983006,2.20231761998777,1.78762273319263,1.22885226604995,1.18697658957174,1.00636407962651,1.56274011167028,2.51264699101243,1.12552522006336,2.13917546887534,2.65165726926301,1.99320353118744,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,9.85903938436764,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,1.52232739156071,0.691846491768175,0.904335843315735,1.05829836422134,0.125666591329675,0,1.73519228303894,0,1.29413479957927,1.10420759230197,1.45462575940567,0,15.2246014446005,19.6879904404648,0.510914110417183,0,0,0,2.84602214869163,3.20250421973039,0.753926112677186,2.08589184230732,2.55715457330331,2.0778804455956,3.24482526135515,1.01839363850316,0.746441823660558,0,3.36706969418358,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.612328492361951,0.384341160854549,0.562210347358373,1.81092359517311,1.07783996466421,0.756424320671277,1.75951124163949,0.876782929710299,1.66828349535359,0.696504333044333,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,2.11073453982987,0.720248245844059,0.946978942340841,0.983821158737019,0.617068451549513,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0,5.67782861123144,2.26390147234426,0,0.264450566663544,0.639864751605702,0.232236671860439,1.67527699718721,2.21851877085677,1.77902435075896,2.28270751335071,1.42358718463353,1.4822905925161,1.75934646160189,1.1937388322469,1.36474860983384,3.59527763461689,1.51296634912286,0.398282546508734,1.13800740571849,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.822074982615345,0.295220295959204,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.51593129416388,2.11854469374634,1.01847051465113,1.17345124144251,1.34005005953453,0.476087281772027,1.36593553500459,1.57635144106191,1.32878813789265,1.2756381492599,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,0.703270119553219,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,1.28528526568723,0.709700426041343,1.24645922567079,0.488660878060728,0.659880491890142,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0,0.356497378384721,1.26414703174326,0,0,0,0.36012218806262,0.517434735131018,0.214337035031592,0,0.713475270408282,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,1.13025098687134,0.482503399425247,0.954978752025092,0.328281799490123,1.45740418314925,2.22510362412612,0.170870880797853,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.949007980743406,0.406638934253697,2.70013352054503,1.04544148007234,1.9652630737156,3.9110660451598,3.38879168473877,2.35580347785627,1.42576470620972,0,0,0,0.66183396182839,1.75006069509643,1.42075805825504,1.01373675294467,0.469428954583016,0.5208175393758,0.314578033277133,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,5.02292944483695,1.87682475451182,0.36630324853453,0.857473516316263,0.501572104035363,1.6942555278512,2.30162618253588,2.86447756719698,1.89038500578056,0,4.5323633843382,1.35004500046361,0.45032120322422,1.81256963593682,2.5888015587591,0.830298780673413,0.798049746802062,1.87806966329548,0.972426868273176,0.628839487883947,0.735374033800057,0.222246727801615,1.23621034343337,1.92551525755089,1.01078884705519,0.50695859978048,1.32038438970253,0.468207537349412,0.448176066834085,0.689225627467359,0.952587382566147,0.579421629724277,0.38581844092741,0,1.17759136107518,1.02860775715625,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,2.10455769150274,0.135804113845862,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,1.54325288784913,0.749431733813838,0.701794825336225,1.50409737833809,0.765153328275374,1.54413993383661,0.927471342481686
|short_description=p1@Wscd2
}}

Latest revision as of 16:04, 1 October 2015

Short description:p1@Wscd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Wscd2_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 68bp_to_ENSMUST00000094452, NM_177292, uc008yyh.2, uc008yyi.2_5end
EntrezGene:Wscd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Wscd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.42e-0823
neuroblast (sensu Vertebrata)5.42e-0823
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:113919535..113919568,%2B&oldid=4310782"