FFCP PHASE1:Mm9::chr5:130505255..130505266,+: Difference between revisions
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{{FFCP|EntrezGene=12909|HGNC=|MCL_coexpression_id=1982|UniProt=|association_with_transcript=42bp_to_ENSMUST00000156729_5end|description=CAGE_peak_3_at_Crcp_5end|id=chr5:130505255..130505266,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-07,23;CL:0000337,1.63e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.29e-15!52;UBERON:0005068!1.29e-15!52;UBERON:0006241!1.29e-15!52;UBERON:0007135!1.29e-15!52;UBERON:0002616!2.82e-14!49;UBERON:0000955!1.17e-13!50;UBERON:0006238!1.17e-13!50;UBERON:0000033!2.39e-13!63;UBERON:0002346!3.46e-13!71;UBERON:0003075!3.46e-13!71;UBERON:0007284!3.46e-13!71;UBERON:0001017!3.22e-12!73;UBERON:0005743!3.22e-12!73;UBERON:0003080!1.81e-11!40;UBERON:0003056!3.29e-11!49;UBERON:0000073!3.44e-11!75;UBERON:0001016!3.44e-11!75;UBERON:0002020!5.52e-11!34;UBERON:0002780!6.34e-11!39;UBERON:0001890!6.34e-11!39;UBERON:0006240!6.34e-11!39;UBERON:0007811!2.46e-09!86;UBERON:0004121!6.52e-09!102;UBERON:0000924!6.52e-09!102;UBERON:0006601!6.52e-09!102;UBERON:0002791!8.59e-09!29;UBERON:0003528!8.59e-09!29;UBERON:0001893!8.59e-09!29;UBERON:0000153!8.80e-09!94;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-26,54;UBERON:0001049,1.07e-24,52;UBERON:0005068,1.07e-24,52;UBERON:0006241,1.07e-24,52;UBERON:0007135,1.07e-24,52;UBERON:0001017,6.42e-22,73;UBERON:0002346,3.19e-21,64;UBERON:0003075,3.19e-21,64;UBERON:0007284,3.19e-21,64;UBERON:0001016,7.07e-21,75;UBERON:0002616,4.99e-20,46;UBERON:0000955,2.50e-19,47;UBERON:0006238,2.50e-19,47;UBERON:0010371,8.64e-19,73;UBERON:0003080,3.97e-17,40;UBERON:0004121,6.00e-17,95;UBERON:0000924,6.00e-17,95;UBERON:0006601,6.00e-17,95;UBERON:0002020,1.25e-16,34;UBERON:0002780,2.98e-16,39;UBERON:0001890,2.98e-16,39;UBERON:0006240,2.98e-16,39;UBERON:0010314,3.18e-15,92;UBERON:0003056,1.03e-14,49;UBERON:0003528,4.31e-13,29;UBERON:0002791,4.31e-13,29;UBERON:0001893,4.31e-13,29;UBERON:0002021,1.49e-11,10;UBERON:0000411,1.49e-11,10;UBERON:0001950,1.49e-11,10;UBERON:0000025,5.88e-11,114;UBERON:0004111,1.80e-10,122;UBERON:0000956,1.65e-08,21;UBERON:0001869,1.65e-08,21;UBERON:0000203,1.65e-08,21;UBERON:0003076,2.94e-08,12;UBERON:0003057,2.94e-08,12;UBERON:0002619,3.05e-08,17;UBERON:0000483,8.22e-07,174|phase1_expression=1.92178616525753,0.697950815278722,0,0.30246421130683,0,0.503637815735669,0.467225281191051,1.03298658753261,0.563154888606667,1.40438715793196,0.68487187290202,0.638177271962691,0.684802919724823,0.699363219351979,0.333109761815663,0.404950534779652,0.699561878128147,0.946386496074713,0.548457734422955,0.84877930359606,3.23164502574065,0.397163804803541,0.261199789138935,0.799962113967033,1.14704640533585,0,0.86152399231815,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,0,2.35292595212406,0.683045484958446,0,0.125896817975577,0.405507724878058,0.183546752161682,1.56478268869608,0,0.219686182734472,0.194429899074283,0,0,0.503347818173209,0.725362142011344,0.336093799142464,1.02903774414379,1.14613375975503,0.515672092277442,1.61853168687678,0,1.26766280701236,0,0.889294796111139,0,0,0,0,0.768436610643109,0.622137673850866,0.675029691658453,2.52389953621658,1.42825492201902,1.76694832761291,0.367472397644862,0.862609239164127,0,3.30347642998166,3.44755812830007,2.4577045320999,0.659431438650969,1.82975287204819,1.56274011167028,3.90856198601933,2.8138130501584,2.59757021220577,2.65165726926301,2.13557521198654,2.42319279572891,0.075726193333184,0.302286240427142,1.44932244350839,0,1.3599426674155,2.15881276655127,0.649776417447669,2.24013443548668,1.26399978118577,0.511290967734173,0.519572009205738,0.70667914902068,1.26759077799012,3.84979432242953,0,14.2213340630666,0.432982082022428,0.506719730950197,0,1.37020655662872,0.776813650941515,0.890652834388949,0.693941307064543,0,0.230615497256059,0.301445281105245,0.823120949949934,1.13099932196708,1.73036477414062,0.578397427679647,0.884610551949874,0.647067399789637,0.220841518460394,0,0,1.75668478206928,1.25668024088073,0,0.479260498023681,0,0.889491589511453,4.19413790333504,8.23501085073528,3.76963056338593,7.30062144807561,5.37002460393694,4.98691306942944,4.86723789203273,0.305518091550949,0.248813941220186,1.26361379216837,0.631325567659422,0.910843100738926,1.14951052216736,0.900310649026746,1.20563854268572,0.612328492361951,0.12811372028485,0.655912071918102,1.03481348295606,1.29340795759705,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0,1.02891068203972,0.199034266818493,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0.703578179943289,0,0.710234206755631,0,0,0.232533944750408,0.536546802799238,0.350296027101508,0.658239399653922,1.47750717671186,0.972825714550269,1.02339991197733,0.658650345873152,0.671032093801859,6.30869845692382,3.91037527041281,0,0.264450566663544,0.63986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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12909 | |||
|HGNC= | |||
|MCL_coexpression_id=1982 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENSMUST00000156729_5end | |||
|cluster_id=chr5:130505255..130505266,+ | |||
|description=CAGE_peak_3_at_Crcp_5end | |||
|id=chr5:130505255..130505266,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-07,23;CL:0000337,1.63e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-15!52;UBERON:0005068!1.29e-15!52;UBERON:0006241!1.29e-15!52;UBERON:0007135!1.29e-15!52;UBERON:0002616!2.82e-14!49;UBERON:0000955!1.17e-13!50;UBERON:0006238!1.17e-13!50;UBERON:0000033!2.39e-13!63;UBERON:0002346!3.46e-13!71;UBERON:0003075!3.46e-13!71;UBERON:0007284!3.46e-13!71;UBERON:0001017!3.22e-12!73;UBERON:0005743!3.22e-12!73;UBERON:0003080!1.81e-11!40;UBERON:0003056!3.29e-11!49;UBERON:0000073!3.44e-11!75;UBERON:0001016!3.44e-11!75;UBERON:0002020!5.52e-11!34;UBERON:0002780!6.34e-11!39;UBERON:0001890!6.34e-11!39;UBERON:0006240!6.34e-11!39;UBERON:0007811!2.46e-09!86;UBERON:0004121!6.52e-09!102;UBERON:0000924!6.52e-09!102;UBERON:0006601!6.52e-09!102;UBERON:0002791!8.59e-09!29;UBERON:0003528!8.59e-09!29;UBERON:0001893!8.59e-09!29;UBERON:0000153!8.80e-09!94;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-26,54;UBERON:0001049,1.07e-24,52;UBERON:0005068,1.07e-24,52;UBERON:0006241,1.07e-24,52;UBERON:0007135,1.07e-24,52;UBERON:0001017,6.42e-22,73;UBERON:0002346,3.19e-21,64;UBERON:0003075,3.19e-21,64;UBERON:0007284,3.19e-21,64;UBERON:0001016,7.07e-21,75;UBERON:0002616,4.99e-20,46;UBERON:0000955,2.50e-19,47;UBERON:0006238,2.50e-19,47;UBERON:0010371,8.64e-19,73;UBERON:0003080,3.97e-17,40;UBERON:0004121,6.00e-17,95;UBERON:0000924,6.00e-17,95;UBERON:0006601,6.00e-17,95;UBERON:0002020,1.25e-16,34;UBERON:0002780,2.98e-16,39;UBERON:0001890,2.98e-16,39;UBERON:0006240,2.98e-16,39;UBERON:0010314,3.18e-15,92;UBERON:0003056,1.03e-14,49;UBERON:0003528,4.31e-13,29;UBERON:0002791,4.31e-13,29;UBERON:0001893,4.31e-13,29;UBERON:0002021,1.49e-11,10;UBERON:0000411,1.49e-11,10;UBERON:0001950,1.49e-11,10;UBERON:0000025,5.88e-11,114;UBERON:0004111,1.80e-10,122;UBERON:0000956,1.65e-08,21;UBERON:0001869,1.65e-08,21;UBERON:0000203,1.65e-08,21;UBERON:0003076,2.94e-08,12;UBERON:0003057,2.94e-08,12;UBERON:0002619,3.05e-08,17;UBERON:0000483,8.22e-07,174 | |||
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| |||
|short_description=p3@Crcp | |||
}} |
Latest revision as of 22:59, 1 October 2015
Short description: | p3@Crcp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Crcp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1982 |
Association with transcript: | 42bp_to_ENSMUST00000156729_5end |
EntrezGene: | Crcp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.63e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-07 | 23 |