FFCP PHASE1:Hg19::chr9:10613168..10613184,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5789 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |||
|TSSclassifier=strong | |||
|UniProt=C9J8S8,P23468,Q2HXI4 | |||
|association_with_transcript=-445bp_to_ENST00000463477,NM_002839,uc003zkt.1_5end | |||
|cluster_id=chr9:10613168..10613184,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_16_at_PTPRD_5end | |||
|id=chr9:10613168..10613184,- | |||
|ontology_enrichment_celltype=CL:0000047!1.20e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.82e-07;6!CL:0000404;2.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.94e-11,8;CL:0000540,2.45e-07,6;CL:0000031,2.45e-07,6;CL:0000404,2.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.82e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-54!82;UBERON:0005743!1.33e-54!86;UBERON:0001049!2.27e-50!57;UBERON:0005068!2.27e-50!57;UBERON:0006241!2.27e-50!57;UBERON:0007135!2.27e-50!57;UBERON:0000073!1.30e-48!94;UBERON:0001016!1.30e-48!94;UBERON:0001950!5.68e-46!20;UBERON:0002616!4.01e-45!59;UBERON:0001893!8.21e-44!34;UBERON:0002020!1.44e-43!34;UBERON:0003528!1.44e-43!34;UBERON:0002780!8.19e-43!41;UBERON:0001890!8.19e-43!41;UBERON:0006240!8.19e-43!41;UBERON:0001869!9.35e-43!32;UBERON:0000955!9.47e-43!69;UBERON:0006238!9.47e-43!69;UBERON:0003080!1.15e-41!42;UBERON:0002619!1.39e-41!22;UBERON:0002791!6.60e-41!33;UBERON:0000956!2.90e-36!25;UBERON:0000203!2.90e-36!25;UBERON:0003075!1.81e-35!86;UBERON:0007284!1.81e-35!86;UBERON:0002346!1.55e-33!90;UBERON:0003056!2.63e-29!61;UBERON:0004121!1.33e-24!169;UBERON:0000033!5.62e-24!123;UBERON:0000924!8.13e-24!173;UBERON:0006601!8.13e-24!173;UBERON:0000153!1.74e-22!129;UBERON:0007811!1.74e-22!129;UBERON:0007023!4.62e-21!115;UBERON:0002021!2.53e-18!5;UBERON:0001871!1.16e-15!7;UBERON:0000200!5.34e-15!6;UBERON:0000025!2.92e-12!194;UBERON:0001872!6.35e-12!5;UBERON:0002771!2.28e-11!3;UBERON:0000988!8.79e-11!3;UBERON:0003076!5.78e-10!15;UBERON:0003057!5.78e-10!15;UBERON:0002308!5.43e-09!9;UBERON:0000125!5.43e-09!9;UBERON:0000064!2.24e-08!219;UBERON:0004111!2.42e-08!241;UBERON:0000483!1.01e-07!309;UBERON:0000119!1.45e-07!312;UBERON:0002148!1.99e-07!2;UBERON:0009662!1.99e-07!2;UBERON:0000477!4.39e-07!286;UBERON:0000475!6.99e-07!365;UBERON:0002298!8.05e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.16e-63;20!UBERON:0002619;3.29e-57;22!UBERON:0000956;2.05e-50;25!UBERON:0000203;2.05e-50;25!UBERON:0001869;9.58e-41;32!UBERON:0001893;6.78e-38;34!UBERON:0002791;2.27e-35;32!UBERON:0002021;1.33e-30;5!UBERON:0003528;3.20e-29;34!UBERON:0002020;3.20e-29;34!UBERON:0000200;3.52e-25;6!UBERON:0002780;1.51e-24;41!UBERON:0001890;1.51e-24;41!UBERON:0001872;8.82e-18;5!UBERON:0000073;4.89e-17;53!UBERON:0002616;4.89e-17;53!UBERON:0000955;1.22e-13;68!UBERON:0001870;1.81e-13;3!UBERON:0001016;1.90e-12;83!UBERON:0001017;9.03e-12;75!UBERON:0002581;9.96e-11;1!UBERON:0002902;9.96e-11;1!UBERON:0002022;9.96e-11;1!UBERON:0003112;9.96e-11;1!UBERON:0011158;9.96e-11;1!UBERON:0009899;9.96e-11;1!UBERON:0007190;9.96e-11;1!UBERON:0003128;9.96e-11;1!UBERON:0001703;9.96e-11;1!UBERON:0002241;9.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.67e-62,20;UBERON:0002619,6.33e-57,22;UBERON:0000956,3.64e-50,25;UBERON:0000203,3.64e-50,25;UBERON:0001869,4.33e-46,32;UBERON:0001893,2.39e-43,34;UBERON:0002791,3.66e-39,32;UBERON:0003528,7.95e-37,34;UBERON:0002020,7.95e-37,34;UBERON:0002780,8.33e-36,41;UBERON:0001890,8.33e-36,41;UBERON:0003080,8.33e-36,41;UBERON:0006240,8.33e-36,41;UBERON:0001017,3.09e-34,81;UBERON:0000073,6.55e-32,53;UBERON:0002616,6.55e-32,53;UBERON:0001016,1.24e-30,89;UBERON:0002021,1.44e-30,5;UBERON:0001049,4.05e-30,56;UBERON:0005068,4.05e-30,56;UBERON:0006241,4.05e-30,56;UBERON:0007135,4.05e-30,56;UBERON:0000955,5.97e-28,68;UBERON:0006238,5.97e-28,68;UBERON:0000200,6.21e-25,6;UBERON:0003056,1.27e-23,61;UBERON:0003075,5.23e-20,82;UBERON:0007284,5.23e-20,82;UBERON:0002346,5.49e-19,86;UBERON:0001872,1.32e-17,5;UBERON:0010371,2.37e-15,104;UBERON:0004121,6.33e-15,171;UBERON:0000924,6.33e-15,171;UBERON:0006601,6.33e-15,171;UBERON:0011216,6.69e-14,223;UBERON:0010314,1.44e-13,132;UBERON:0001870,2.49e-13,3;UBERON:0003112,5.57e-11,1;UBERON:0011158,5.57e-11,1;UBERON:0003128,5.57e-11,1;UBERON:0001703,5.57e-11,1;UBERON:0002241,5.57e-11,1;UBERON:0004761,5.57e-11,1;UBERON:0009617,5.57e-11,1;UBERON:0007190,7.46e-11,1;UBERON:0002022,8.22e-11,1;UBERON:0002902,9.97e-11,1;UBERON:0009899,9.97e-11,1;UBERON:0002581,1.46e-10,1;UBERON:0007023,3.00e-08,114;UBERON:0000025,2.59e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0.773288812777695,1.50764638800914,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,5.98841394003583,0,0,0,0,0,0,0.689486746482929,0.291604613383254,3.81974988853243,0,0.241192877250816,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,7.03967351750127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27574068981852,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,1.001527445652,0,0,0.124192805882767,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.770750701157514,1.41696576325585,0.319267718114302,1.02558182120378,21.9302375712895,1.24483054435592,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,0,0.413373593002368,1.14148458349032,14.7683198434919,0,0,0,0,0,0,0,0.682986574053893,0,0,0,1.22345519358297,1.05236437700559,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,5.23620828408453,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@PTPRD | |||
}} |
Latest revision as of 22:41, 19 September 2015
Short description: | p16@PTPRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PTPRD_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -445bp_to_ENST00000463477, NM_002839, uc003zkt.1_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J8S8P23468Q2HXI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.94e-11 | 8 |
neuron | 2.45e-07 | 6 |
neuroblast | 2.45e-07 | 6 |
electrically signaling cell | 2.45e-07 | 6 |