FFCP PHASE1:Mm9::chr11:100801171..100801185,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:100801171..100801185,+
|short_description=p@chr11:100801171..100801185,+
|description=CAGE_peak_at_chr11:100801171..100801185,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:100801171..100801185,+ | |||
|description=CAGE_peak_at_chr11:100801171..100801185,+ | |||
|id=chr11:100801171..100801185,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.67e-09!9;CL:0000789!1.67e-09!9;CL:0002420!1.67e-09!9;CL:0002419!1.67e-09!9;CL:0000790!1.67e-09!9;CL:0000838!5.26e-09!12;CL:0000624!7.41e-09!8;CL:0000063!1.67e-08!66;CL:0000144!1.87e-08!121;CL:0000012!1.87e-08!121;CL:0000084!2.41e-08!11;CL:0000827!2.41e-08!11;CL:0000542!4.99e-08!13;CL:0000051!4.99e-08!13;CL:0002371!5.40e-08!118;CL:0002031!8.66e-08!25;CL:0000988!2.62e-07!32;CL:0002032!2.62e-07!32;CL:0000037!2.62e-07!32;CL:0000566!2.62e-07!32;CL:0000837!2.62e-07!32;CL:0002563!5.60e-07!9;CL:0002251!5.60e-07!9;CL:0000219!5.64e-07!54;CL:0000893!8.76e-07!6;CL:0002489!8.76e-07!6;CL:0000898!8.76e-07!6;CL:0000809!8.76e-07!6;CL:0000810!8.76e-07!6;CL:0000895!8.76e-07!6;CL:0000808!8.76e-07!6;CL:0000894!8.76e-07!6;CL:0000806!8.76e-07!6;CL:0000807!8.76e-07!6;CL:0000805!8.76e-07!6;CL:0002425!8.76e-07!6;CL:0002436!8.76e-07!6;CL:0002427!8.76e-07!6;CL:0002428!8.76e-07!6;CL:0002429!8.76e-07!6;CL:0002433!8.76e-07!6;CL:0002431!8.76e-07!6;CL:0002432!8.76e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.02e-14,8;CL:0000791,2.83e-12,9;CL:0000789,2.83e-12,9;CL:0002420,2.83e-12,9;CL:0002419,2.83e-12,9;CL:0000790,2.83e-12,9;CL:0000084,4.30e-10,11;CL:0000827,4.30e-10,11;CL:0000838,2.85e-09,12;CL:0000542,1.41e-08,13;CL:0000051,1.41e-08,13;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1;CL:0000815,2.54e-08,1;CL:0000792,2.54e-08,1;CL:0000710,6.57e-08,1;CL:0002077,6.57e-08,1;CL:0005014,6.57e-08,1;CL:0002315,6.57e-08,1;CL:0002490,6.57e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.19e-10,6;DOID:0060100,5.56e-10,3;DOID:4045,5.56e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!7.98e-09!11;UBERON:0000490!5.55e-07!66;UBERON:0003350!5.60e-07!9;UBERON:0004808!5.60e-07!9;UBERON:0001277!5.60e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,0.30246421130683,2.00358291978539,0,0.700837921786577,2.1950964985068,0.985521055061667,0.468129052643987,0.513653904676515,0.638177271962691,1.19840510951844,1.22388563386596,0,0.404950534779652,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.577703239502549,0.332469290716985,1.83752420636132,0.418531630736908,1.5626706890476,1.57057123192139,7.64700934440319,0.683045484958446,1.45653105909346,0.503587271902309,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,3.62681071005672,0.336093799142464,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,22.6094301187309,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0.192423683280659,0,0,0.443971906748129,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |phase1_expression=0.960893082628764,0.697950815278722,0.454999239389536,0.30246421130683,2.00358291978539,0,0.700837921786577,2.1950964985068,0.985521055061667,0.468129052643987,0.513653904676515,0.638177271962691,1.19840510951844,1.22388563386596,0,0.404950534779652,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.577703239502549,0.332469290716985,1.83752420636132,0.418531630736908,1.5626706890476,1.57057123192139,7.64700934440319,0.683045484958446,1.45653105909346,0.503587271902309,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,3.62681071005672,0.336093799142464,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,22.6094301187309,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0.291480836629851,0,0.341741761595705,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0.192423683280659,0,0,0.443971906748129,0,0.167884616364078,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr11:100801171..100801185,+ | |||
}} | }} |
Latest revision as of 03:47, 5 August 2015
Short description: | p@chr11:100801171..100801185, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100801171..100801185, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 9.02e-14 | 8 |
mature alpha-beta T cell | 2.83e-12 | 9 |
alpha-beta T cell | 2.83e-12 | 9 |
immature T cell | 2.83e-12 | 9 |
mature T cell | 2.83e-12 | 9 |
immature alpha-beta T cell | 2.83e-12 | 9 |
T cell | 4.30e-10 | 11 |
pro-T cell | 4.30e-10 | 11 |
lymphoid lineage restricted progenitor cell | 2.85e-09 | 12 |
lymphocyte | 1.41e-08 | 13 |
common lymphoid progenitor | 1.41e-08 | 13 |
lining cell | 1.56e-08 | 1 |
meso-epithelial cell | 1.56e-08 | 1 |
endothelial cell | 1.56e-08 | 1 |
endothelial cell of sinusoid | 1.56e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.56e-08 | 1 |
regulatory T cell | 2.54e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.54e-08 | 1 |
neurecto-epithelial cell | 6.57e-08 | 1 |
ecto-epithelial cell | 6.57e-08 | 1 |
auditory epithelial support cell | 6.57e-08 | 1 |
supporting cell of cochlea | 6.57e-08 | 1 |
organ of Corti supporting cell | 6.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.56e-08 | 1 |
hepatic sinusoid | 1.56e-08 | 1 |
parenchyma | 1.56e-08 | 1 |
abdomen blood vessel | 1.56e-08 | 1 |
sinusoid | 1.56e-08 | 1 |
digestive system duct | 1.56e-08 | 1 |
abdominal segment blood vessel | 1.56e-08 | 1 |
trunk blood vessel | 1.56e-08 | 1 |
liver parenchyma | 1.56e-08 | 1 |
liver lobule | 1.56e-08 | 1 |
biliary system | 1.56e-08 | 1 |
biliary tree | 1.56e-08 | 1 |
biliary bud | 1.56e-08 | 1 |
hepatic duct | 1.56e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.19e-10 | 6 |
musculoskeletal system cancer | 5.56e-10 | 3 |
muscle cancer | 5.56e-10 | 3 |