FFCP PHASE1:Mm9::chr6:54631681..54631777,+: Difference between revisions
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{{FFCP|EntrezGene=68235|HGNC=|MCL_coexpression_id=22|UniProt=Q9CR65,Q8CGA4|association_with_transcript=0bp_to_ENSMUST00000046276,ENSMUST00000171760,NM_026629,uc009cad.1_5end|description=CAGE_peak_1_at_2410066E13Rik_5end|id=chr6:54631681..54631777,+|ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.57e-10!33;CL:0000047!1.57e-10!33;CL:0000031!1.57e-10!33;CL:0000404!1.57e-10!33;CL:0000393!2.78e-09!39;CL:0000211!2.78e-09!39;CL:0002319!6.98e-07!43;CL:0000221!9.46e-07!44;CL:0000133!9.46e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-15,23;CL:0000337,1.15e-15,23;CL:0000540,1.54e-10,33;CL:0000047,1.54e-10,33;CL:0000031,1.54e-10,33;CL:0000404,1.54e-10,33;CL:0000393,2.73e-09,39;CL:0000211,2.73e-09,39;CL:0002319,6.88e-07,43;CL:0000221,9.34e-07,44;CL:0000133,9.34e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.78e-17!63;UBERON:0001049!6.51e-17!52;UBERON:0005068!6.51e-17!52;UBERON:0006241!6.51e-17!52;UBERON:0007135!6.51e-17!52;UBERON:0002346!7.05e-16!71;UBERON:0003075!7.05e-16!71;UBERON:0007284!7.05e-16!71;UBERON:0000955!2.19e-15!50;UBERON:0006238!2.19e-15!50;UBERON:0002616!2.49e-15!49;UBERON:0001017!4.58e-15!73;UBERON:0005743!4.58e-15!73;UBERON:0002020!6.81e-15!34;UBERON:0004121!9.59e-15!102;UBERON:0000924!9.59e-15!102;UBERON:0006601!9.59e-15!102;UBERON:0003056!1.18e-14!49;UBERON:0000073!7.13e-14!75;UBERON:0001016!7.13e-14!75;UBERON:0007811!1.04e-12!86;UBERON:0003080!1.41e-12!40;UBERON:0002780!4.09e-12!39;UBERON:0001890!4.09e-12!39;UBERON:0006240!4.09e-12!39;UBERON:0002791!5.71e-12!29;UBERON:0003528!5.71e-12!29;UBERON:0001893!5.71e-12!29;UBERON:0000153!1.04e-10!94;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-18,54;UBERON:0010371,6.36e-18,73;UBERON:0002346,1.15e-17,64;UBERON:0003075,1.15e-17,64;UBERON:0007284,1.15e-17,64;UBERON:0001049,6.26e-17,52;UBERON:0005068,6.26e-17,52;UBERON:0006241,6.26e-17,52;UBERON:0007135,6.26e-17,52;UBERON:0004121,7.57e-16,95;UBERON:0000924,7.57e-16,95;UBERON:0006601,7.57e-16,95;UBERON:0001017,4.43e-15,73;UBERON:0002020,6.58e-15,34;UBERON:0003056,1.14e-14,49;UBERON:0001016,6.91e-14,75;UBERON:0000955,1.24e-13,47;UBERON:0006238,1.24e-13,47;UBERON:0002616,1.42e-13,46;UBERON:0003080,1.37e-12,40;UBERON:0002780,3.99e-12,39;UBERON:0001890,3.99e-12,39;UBERON:0006240,3.99e-12,39;UBERON:0003528,5.56e-12,29;UBERON:0002791,5.56e-12,29;UBERON:0001893,5.56e-12,29;UBERON:0010314,2.70e-11,92;UBERON:0000956,1.04e-07,21;UBERON:0001869,1.04e-07,21;UBERON:0000203,1.04e-07,21|phase1_expression=11.2104192973356,0,0,0.30246421130683,0,0.16787927191189,0,23.6295681898085,2.956563165185,4.44722600011788,1.02730780935303,0.558405112967355,12.497653284978,18.6205457152464,2.99798785634096,4.45445588257617,3.49780939064073,3.78554598429885,4.2505474417779,3.81950686618227,14.0321428749265,0.496454756004426,0.261199789138935,0.639969691173627,0.68822784320151,0,1.29228598847722,0,0.190023419456374,1.26015064879965,0.443461021310609,0,0.61506478758457,0,1.1554064790051,0.332469290716985,0.204169356262369,2.92972141515835,0,2.09409497589519,1.17646297606203,2.04913645487534,1.45653105909346,7.1761186246079,6.18399280439039,3.85448179539531,3.12956537739216,5.45062890951116,9.22681967484782,9.72149495371417,3.21968769738334,1.43752564364972,5.20126078778983,17.4086914082723,26.2153163331122,3.8588915405392,4.01146815914259,5.15672092277442,46.5327859977075,38.0873505075864,50.0726808769882,5.42151251310611,5.33576877666684,5.84934816232909,1.97773272513395,3.5524005747305,2.39680088414724,1.92109152660777,62.524836222012,65.0728622758749,67.724637555145,22.8520787523043,20.7616428494517,34.7873869770469,38.2423429362763,34.0110951045708,23.1243350098716,40.2215114968341,33.7934373163736,46.5558595687584,60.1073818467831,42.1939830150976,21.217907924105,19.1339287410771,23.0725354142983,30.3467443037878,31.3217697758026,36.7206908275842,1.13589289999776,2.72057616384428,4.63783181922684,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,7.72444310724635,5.62420064507591,7.79358013808606,6.36011234118612,4.64783285263046,15.3991772897181,12.7402619853323,14.2213340630666,0.216491041011214,0.506719730950197,0,8.44960709921044,4.91981978929626,7.12522267511159,2.4287945747259,2.13125834818499,2.99800146432876,5.72746034099966,7.64326596382081,5.52933001850572,2.96633961281249,17.4965221873093,4.42305275974937,3.72063754879041,6.8460870722722,3.87900202508178,3.72783522436244,10.5401086924157,15.2896095973822,2.81002760729451,2.03685711660064,0.599902730993408,2.41433431438823,14.2301107434582,9.60751265919116,55.2879149296603,11.298580812498,8.69432554923124,22.8566849015516,19.7934340942664,11.1004906596845,5.59831367745419,4.54900965180614,3.99839526184301,6.11566081924707,8.96618207290544,10.9837899181263,11.0014517020072,13.6753363294169,12.4270308676304,14.3363638576385,11.6416516832557,1.508975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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68235 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CR65,Q8CGA4 | |||
|association_with_transcript=0bp_to_ENSMUST00000046276,ENSMUST00000171760,NM_026629,uc009cad.1_5end | |||
|cluster_id=chr6:54631681..54631777,+ | |||
|description=CAGE_peak_1_at_2410066E13Rik_5end | |||
|id=chr6:54631681..54631777,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-15!23;CL:0000337!1.19e-15!23;CL:0000540!1.57e-10!33;CL:0000047!1.57e-10!33;CL:0000031!1.57e-10!33;CL:0000404!1.57e-10!33;CL:0000393!2.78e-09!39;CL:0000211!2.78e-09!39;CL:0002319!6.98e-07!43;CL:0000221!9.46e-07!44;CL:0000133!9.46e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-15,23;CL:0000337,1.15e-15,23;CL:0000540,1.54e-10,33;CL:0000047,1.54e-10,33;CL:0000031,1.54e-10,33;CL:0000404,1.54e-10,33;CL:0000393,2.73e-09,39;CL:0000211,2.73e-09,39;CL:0002319,6.88e-07,43;CL:0000221,9.34e-07,44;CL:0000133,9.34e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.78e-17!63;UBERON:0001049!6.51e-17!52;UBERON:0005068!6.51e-17!52;UBERON:0006241!6.51e-17!52;UBERON:0007135!6.51e-17!52;UBERON:0002346!7.05e-16!71;UBERON:0003075!7.05e-16!71;UBERON:0007284!7.05e-16!71;UBERON:0000955!2.19e-15!50;UBERON:0006238!2.19e-15!50;UBERON:0002616!2.49e-15!49;UBERON:0001017!4.58e-15!73;UBERON:0005743!4.58e-15!73;UBERON:0002020!6.81e-15!34;UBERON:0004121!9.59e-15!102;UBERON:0000924!9.59e-15!102;UBERON:0006601!9.59e-15!102;UBERON:0003056!1.18e-14!49;UBERON:0000073!7.13e-14!75;UBERON:0001016!7.13e-14!75;UBERON:0007811!1.04e-12!86;UBERON:0003080!1.41e-12!40;UBERON:0002780!4.09e-12!39;UBERON:0001890!4.09e-12!39;UBERON:0006240!4.09e-12!39;UBERON:0002791!5.71e-12!29;UBERON:0003528!5.71e-12!29;UBERON:0001893!5.71e-12!29;UBERON:0000153!1.04e-10!94;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-18,54;UBERON:0010371,6.36e-18,73;UBERON:0002346,1.15e-17,64;UBERON:0003075,1.15e-17,64;UBERON:0007284,1.15e-17,64;UBERON:0001049,6.26e-17,52;UBERON:0005068,6.26e-17,52;UBERON:0006241,6.26e-17,52;UBERON:0007135,6.26e-17,52;UBERON:0004121,7.57e-16,95;UBERON:0000924,7.57e-16,95;UBERON:0006601,7.57e-16,95;UBERON:0001017,4.43e-15,73;UBERON:0002020,6.58e-15,34;UBERON:0003056,1.14e-14,49;UBERON:0001016,6.91e-14,75;UBERON:0000955,1.24e-13,47;UBERON:0006238,1.24e-13,47;UBERON:0002616,1.42e-13,46;UBERON:0003080,1.37e-12,40;UBERON:0002780,3.99e-12,39;UBERON:0001890,3.99e-12,39;UBERON:0006240,3.99e-12,39;UBERON:0003528,5.56e-12,29;UBERON:0002791,5.56e-12,29;UBERON:0001893,5.56e-12,29;UBERON:0010314,2.70e-11,92;UBERON:0000956,1.04e-07,21;UBERON:0001869,1.04e-07,21;UBERON:0000203,1.04e-07,21 | |||
|phase1_expression=11.2104192973356,0,0,0.30246421130683,0,0.16787927191189,0,23.6295681898085,2.956563165185,4.44722600011788,1.02730780935303,0.558405112967355,12.497653284978,18.6205457152464,2.99798785634096,4.45445588257617,3.49780939064073,3.78554598429885,4.2505474417779,3.81950686618227,14.0321428749265,0.496454756004426,0.261199789138935,0.639969691173627,0.68822784320151,0,1.29228598847722,0,0.190023419456374,1.26015064879965,0.443461021310609,0,0.61506478758457,0,1.1554064790051,0.332469290716985,0.204169356262369,2.92972141515835,0,2.09409497589519,1.17646297606203,2.04913645487534,1.45653105909346,7.1761186246079,6.18399280439039,3.85448179539531,3.12956537739216,5.45062890951116,9.22681967484782,9.72149495371417,3.21968769738334,1.43752564364972,5.20126078778983,17.4086914082723,26.2153163331122,3.8588915405392,4.01146815914259,5.15672092277442,46.5327859977075,38.0873505075864,50.0726808769882,5.42151251310611,5.33576877666684,5.84934816232909,1.97773272513395,3.5524005747305,2.39680088414724,1.92109152660777,62.524836222012,65.0728622758749,67.724637555145,22.8520787523043,20.7616428494517,34.7873869770469,38.2423429362763,34.0110951045708,23.1243350098716,40.2215114968341,33.7934373163736,46.5558595687584,60.1073818467831,42.1939830150976,21.217907924105,19.1339287410771,23.0725354142983,30.3467443037878,31.3217697758026,36.7206908275842,1.13589289999776,2.72057616384428,4.63783181922684,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,7.72444310724635,5.62420064507591,7.79358013808606,6.36011234118612,4.64783285263046,15.3991772897181,12.7402619853323,14.2213340630666,0.216491041011214,0.506719730950197,0,8.44960709921044,4.91981978929626,7.12522267511159,2.4287945747259,2.13125834818499,2.99800146432876,5.72746034099966,7.64326596382081,5.52933001850572,2.96633961281249,17.4965221873093,4.42305275974937,3.72063754879041,6.8460870722722,3.87900202508178,3.72783522436244,10.5401086924157,15.2896095973822,2.81002760729451,2.03685711660064,0.599902730993408,2.41433431438823,14.2301107434582,9.60751265919116,55.2879149296603,11.298580812498,8.69432554923124,22.8566849015516,19.7934340942664,11.1004906596845,5.59831367745419,4.54900965180614,3.99839526184301,6.11566081924707,8.96618207290544,10.9837899181263,11.0014517020072,13.6753363294169,12.4270308676304,14.3363638576385,11.6416516832557,1.5089759505299,3.78212160335639,2.99116911078713,3.94552318369635,4.17070873838397,1.74126083261083,5.14455341019859,1.99034266818493,0.702213187313235,1.54408744268829,0.568326998791185,2.07125772535502,1.64168241986767,2.88099298337624,4.49814997611899,1.96764231747404,2.31400669331067,3.72054311600653,2.95100741539581,5.25444040652263,2.30383789878873,3.61168420974009,5.59374785866405,6.14039947186396,3.95190207523891,8.99183005694491,18.7158054222073,64.5211919618113,2.97376904685418,1.58670339998127,2.55945900642281,2.55460339046482,3.47942145569652,2.62188582010345,2.89091456998331,3.23383564391351,3.79623249235609,3.12928013975621,4.77536896720512,3.97912944082302,3.70431765526328,1.79763881730844,2.37751854862164,3.38540164532424,2.46568271239006,2.28497025219458,0,4.2766778847516,3.49114476901726,10.3801013437671,5.81776141543167,17.1227771656338,13.1878931386755,21.5945036863151,1.1858105083486,0.667380422864376,0.786235980452812,0,1.42002084971952,0.964708639009667,1.78238096246994,1.43848068725405,3.08056930872567,3.29473695825698,0,1.86070473834252,0.312037673114561,1.26289438973556,1.07638448113147,5.78932225636041,10.9004382198297,3.22135400009824,1.46668478797823,0.848725428875941,3.52035372432753,3.01511263395268,4.52282917683426,12.0982861671835,4.25614889086716,3.10050565508285,6.69710028361446,11.3065687153859,6.38934432903814,14.3202567995696,3.01582567878545,1.63171705145613,6.39293554924747,5.51873492609465,13.3256989689867,15.8235776899474,5.08198330667694,5.04941854408746,2.2085575359138,3.12350995437311,4.73931475012158,1.19484398976276,3.56477878531831,5.37845408498782,2.83367491172426,5.55286130031493,7.11518000303742,7.39039027770156,11.639086987078,5.1639025063504,7.98146100832523,9.40329700943452,9.2921596837974,2.18502572539483,3.32555912661226,4.33791683438566,4.13422650033082,7.07100840271033,8.01127708821486,6.18007340111759,6.77345018930971,12.3254335594968,8.4334886859999,11.3449097573006,11.234506989875,4.14140516272013,5.17434735131018,4.71541477069503,4.25616560741457,5.52943334566419,9.70839221552514,7.61162372786498,0.938686832254841,1.48282449604674,8.15955072803359,6.26567761177624,7.58882805470756,5.97097956788743,8.8335534562321,5.9090723908222,3.20628920292836,13.7214723487777,4.78438466233988,2.68302928352189,2.96311243791539,6.78126445216888,7.24479406921433,8.23601423543482,5.09935289981566,7.27747552083022,7.18639863783004,5.72802370809068,3.16335993581135,4.67634774391752,4.75223499615926,3.55450103224597,4.14888871117737,3.50647300600534,5.53778153359751,8.11443420150492,1.94422459937689,4.34937519160848,2.81846469342095,2.5417812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| |||
|short_description=p1@2410066E13Rik | |||
}} |
Latest revision as of 14:01, 1 October 2015
Short description: | p1@2410066E13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2410066E13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000046276, ENSMUST00000171760, NM_026629, uc009cad.1_5end |
EntrezGene: | 2410066E13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-15 | 23 |
neuron | 1.54e-10 | 33 |
neuronal stem cell | 1.54e-10 | 33 |
neuroblast | 1.54e-10 | 33 |
electrically signaling cell | 1.54e-10 | 33 |
electrically responsive cell | 2.73e-09 | 39 |
electrically active cell | 2.73e-09 | 39 |
neural cell | 6.88e-07 | 43 |
ectodermal cell | 9.34e-07 | 44 |
neurectodermal cell | 9.34e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.58e-18 | 54 |
ecto-epithelium | 6.36e-18 | 73 |
neurectoderm | 1.15e-17 | 64 |
neural plate | 1.15e-17 | 64 |
presumptive neural plate | 1.15e-17 | 64 |
neural tube | 6.26e-17 | 52 |
neural rod | 6.26e-17 | 52 |
future spinal cord | 6.26e-17 | 52 |
neural keel | 6.26e-17 | 52 |
ectoderm-derived structure | 7.57e-16 | 95 |
ectoderm | 7.57e-16 | 95 |
presumptive ectoderm | 7.57e-16 | 95 |
central nervous system | 4.43e-15 | 73 |
gray matter | 6.58e-15 | 34 |
pre-chordal neural plate | 1.14e-14 | 49 |
nervous system | 6.91e-14 | 75 |
brain | 1.24e-13 | 47 |
future brain | 1.24e-13 | 47 |
regional part of brain | 1.42e-13 | 46 |
anterior neural tube | 1.37e-12 | 40 |
regional part of forebrain | 3.99e-12 | 39 |
forebrain | 3.99e-12 | 39 |
future forebrain | 3.99e-12 | 39 |
brain grey matter | 5.56e-12 | 29 |
regional part of telencephalon | 5.56e-12 | 29 |
telencephalon | 5.56e-12 | 29 |
structure with developmental contribution from neural crest | 2.70e-11 | 92 |
cerebral cortex | 1.04e-07 | 21 |
cerebral hemisphere | 1.04e-07 | 21 |
pallium | 1.04e-07 | 21 |