FFCP PHASE1:Mm9::chr7:109082467..109082540,+: Difference between revisions
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{{FFCP|EntrezGene=101706|HGNC=|MCL_coexpression_id=113|UniProt=Q80Y35,Q3TH77|association_with_transcript=-84bp_to_uc009ipz.1,uc009iqa.1_5end|description=CAGE_peak_2_at_Numa1_5end|id=chr7:109082467..109082540,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.94e-22!94;UBERON:0007811!1.51e-21!86;UBERON:0000033!8.01e-16!63;UBERON:0003056!2.49e-14!49;UBERON:0002346!1.15e-13!71;UBERON:0003075!1.15e-13!71;UBERON:0007284!1.15e-13!71;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0000955!2.01e-12!50;UBERON:0006238!2.01e-12!50;UBERON:0002616!7.70e-12!49;UBERON:0001017!2.52e-11!73;UBERON:0005743!2.52e-11!73;UBERON:0001049!5.04e-11!52;UBERON:0005068!5.04e-11!52;UBERON:0006241!5.04e-11!52;UBERON:0007135!5.04e-11!52;UBERON:0003080!5.49e-11!40;UBERON:0000073!5.52e-11!75;UBERON:0001016!5.52e-11!75;UBERON:0002780!1.41e-10!39;UBERON:0001890!1.41e-10!39;UBERON:0006240!1.41e-10!39;UBERON:0002791!2.62e-09!29;UBERON:0003528!2.62e-09!29;UBERON:0001893!2.62e-09!29;UBERON:0000475!1.05e-08!200;UBERON:0002020!2.45e-08!34;UBERON:0000477!1.19e-07!154;UBERON:0000956!2.51e-07!21;UBERON:0001869!2.51e-07!21;UBERON:0000203!2.51e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.49e-14,49;UBERON:0002346,2.52e-14,64;UBERON:0003075,2.52e-14,64;UBERON:0007284,2.52e-14,64;UBERON:0004121,1.10e-13,95;UBERON:0000924,1.10e-13,95;UBERON:0006601,1.10e-13,95;UBERON:0010371,4.85e-13,73;UBERON:0000955,5.19e-12,47;UBERON:0006238,5.19e-12,47;UBERON:0002616,1.99e-11,46;UBERON:0001017,2.52e-11,73;UBERON:0000073,4.24e-11,54;UBERON:0001049,5.03e-11,52;UBERON:0005068,5.03e-11,52;UBERON:0006241,5.03e-11,52;UBERON:0007135,5.03e-11,52;UBERON:0003080,5.48e-11,40;UBERON:0001016,5.51e-11,75;UBERON:0002780,1.41e-10,39;UBERON:0001890,1.41e-10,39;UBERON:0006240,1.41e-10,39;UBERON:0010314,1.72e-10,92;UBERON:0003528,2.61e-09,29;UBERON:0002791,2.61e-09,29;UBERON:0001893,2.61e-09,29;UBERON:0007811,1.39e-08,36;UBERON:0002020,2.45e-08,34;UBERON:0000153,4.49e-08,43;UBERON:0000956,2.51e-07,21;UBERON:0001869,2.51e-07,21;UBERON:0000203,2.51e-07,21|phase1_expression=7.36684696682052,0.348975407639361,1.81999695755814,0.60492842261366,0.500895729946347,1.00727563147134,1.40167584357315,26.21203465864,7.60259099619,9.59664557920173,19.3476304094821,18.5869130459134,25.6801094896809,25.8764391160232,4.66353666541928,9.31386229993199,9.09430441566591,11.5143690355757,12.4774134581222,7.21462408056651,10.1201515279773,2.08510997521859,1.30599894569468,1.91990907352088,0.91763712426868,0.57423196411502,0.430761996159075,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,3.17515336729816,3.69038872550742,0,1.44425809875637,1.16364251750945,1.22501613757421,7.53356935326434,3.906676722619,5.75876118371178,12.3528612486513,11.6117732442936,11.6522484727477,3.77690453926732,4.66333883609767,3.12029478674859,2.34717403304412,3.92445281484804,3.51497892375155,6.22175677037707,6.7193482380174,5.75010257459886,9.56360854529097,21.7608642603403,18.4851589528355,4.11615097657515,3.72493471920384,3.09403255366465,13.3528864167335,12.6957835025288,12.6766280701236,5.42151251310611,3.55717918444456,2.2497492932035,0,1.4209602298922,3.29560121570245,3.45796474789399,30.7958148556179,29.2962886179769,26.2906201689228,6.85562362569129,7.95126747425809,26.9479758272899,35.5586697477657,21.1420320920305,9.91042928994498,12.257984456178,14.7462271925994,20.9699197491008,19.4868680873133,21.3574481928272,7.2587579740359,10.6924895906019,12.071061574368,10.3120004915784,10.1083893367363,11.7431650869939,7.95125029998433,9.3708734532414,13.0439019915755,1.72084775396277,1.3599426674155,0.539703191637817,1.29955283489534,0.896053774194671,7.8648875273781,3.57903677413921,0.779358013808606,1.06001872353102,9.85903938436764,0,5.09610479413291,0,1.29894624606728,0,1.01104889002957,3.4255163915718,27.7063535502474,16.0317510190011,6.24547176358089,9.13396434936424,8.76338889573022,10.399862198131,9.17191915658498,10.5559936716927,4.44950941921873,8.09756398751505,10.6153266233985,10.5148452465816,7.28777010919299,8.24287930329878,1.86391761218122,41.2820923786281,29.5319856606972,3.32094171771169,6.35020159881377,2.39961092397363,4.44745794755726,18.1246673679835,28.8225379775735,26.0104508873629,23.292458905765,23.0143911597297,19.7398642331582,17.0353326221146,9.3692214742291,11.1966273549084,13.8997517138521,17.0457903268044,15.7445735984871,8.5063778640385,14.945156773844,16.5775299619287,22.3159717216355,23.1885833715578,24.3624483855295,31.0444044886819,6.68260778091811,8.50977360755187,14.6039433056078,10.302199424096,8.89751197521913,12.537077994798,9.67176041117334,9.35461054046918,1.40442637462647,4.63226232806487,2.84163499395593,8.49215667395558,7.97388603935727,6.66229627405755,10.6535131013345,8.85439042863317,7.71335564436891,7.67362017676346,10.1943892531855,7.58974725386602,8.3925523455875,12.31255980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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101706 | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|TSSclassifier=NA | |||
|UniProt=Q80Y35,Q3TH77 | |||
|association_with_transcript=-84bp_to_uc009ipz.1,uc009iqa.1_5end | |||
|cluster_id=chr7:109082467..109082540,+ | |||
|description=CAGE_peak_2_at_Numa1_5end | |||
|id=chr7:109082467..109082540,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.94e-22!94;UBERON:0007811!1.51e-21!86;UBERON:0000033!8.01e-16!63;UBERON:0003056!2.49e-14!49;UBERON:0002346!1.15e-13!71;UBERON:0003075!1.15e-13!71;UBERON:0007284!1.15e-13!71;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0000955!2.01e-12!50;UBERON:0006238!2.01e-12!50;UBERON:0002616!7.70e-12!49;UBERON:0001017!2.52e-11!73;UBERON:0005743!2.52e-11!73;UBERON:0001049!5.04e-11!52;UBERON:0005068!5.04e-11!52;UBERON:0006241!5.04e-11!52;UBERON:0007135!5.04e-11!52;UBERON:0003080!5.49e-11!40;UBERON:0000073!5.52e-11!75;UBERON:0001016!5.52e-11!75;UBERON:0002780!1.41e-10!39;UBERON:0001890!1.41e-10!39;UBERON:0006240!1.41e-10!39;UBERON:0002791!2.62e-09!29;UBERON:0003528!2.62e-09!29;UBERON:0001893!2.62e-09!29;UBERON:0000475!1.05e-08!200;UBERON:0002020!2.45e-08!34;UBERON:0000477!1.19e-07!154;UBERON:0000956!2.51e-07!21;UBERON:0001869!2.51e-07!21;UBERON:0000203!2.51e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.49e-14,49;UBERON:0002346,2.52e-14,64;UBERON:0003075,2.52e-14,64;UBERON:0007284,2.52e-14,64;UBERON:0004121,1.10e-13,95;UBERON:0000924,1.10e-13,95;UBERON:0006601,1.10e-13,95;UBERON:0010371,4.85e-13,73;UBERON:0000955,5.19e-12,47;UBERON:0006238,5.19e-12,47;UBERON:0002616,1.99e-11,46;UBERON:0001017,2.52e-11,73;UBERON:0000073,4.24e-11,54;UBERON:0001049,5.03e-11,52;UBERON:0005068,5.03e-11,52;UBERON:0006241,5.03e-11,52;UBERON:0007135,5.03e-11,52;UBERON:0003080,5.48e-11,40;UBERON:0001016,5.51e-11,75;UBERON:0002780,1.41e-10,39;UBERON:0001890,1.41e-10,39;UBERON:0006240,1.41e-10,39;UBERON:0010314,1.72e-10,92;UBERON:0003528,2.61e-09,29;UBERON:0002791,2.61e-09,29;UBERON:0001893,2.61e-09,29;UBERON:0007811,1.39e-08,36;UBERON:0002020,2.45e-08,34;UBERON:0000153,4.49e-08,43;UBERON:0000956,2.51e-07,21;UBERON:0001869,2.51e-07,21;UBERON:0000203,2.51e-07,21 | |||
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| |||
|short_description=p2@Numa1 | |||
}} |
Latest revision as of 15:41, 25 September 2015
Short description: | p2@Numa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Numa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | -84bp_to_uc009ipz.1, uc009iqa.1_5end |
EntrezGene: | Numa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.49e-14 | 49 |
neurectoderm | 2.52e-14 | 64 |
neural plate | 2.52e-14 | 64 |
presumptive neural plate | 2.52e-14 | 64 |
ectoderm-derived structure | 1.10e-13 | 95 |
ectoderm | 1.10e-13 | 95 |
presumptive ectoderm | 1.10e-13 | 95 |
ecto-epithelium | 4.85e-13 | 73 |
brain | 5.19e-12 | 47 |
future brain | 5.19e-12 | 47 |
regional part of brain | 1.99e-11 | 46 |
central nervous system | 2.52e-11 | 73 |
regional part of nervous system | 4.24e-11 | 54 |
neural tube | 5.03e-11 | 52 |
neural rod | 5.03e-11 | 52 |
future spinal cord | 5.03e-11 | 52 |
neural keel | 5.03e-11 | 52 |
anterior neural tube | 5.48e-11 | 40 |
nervous system | 5.51e-11 | 75 |
regional part of forebrain | 1.41e-10 | 39 |
forebrain | 1.41e-10 | 39 |
future forebrain | 1.41e-10 | 39 |
structure with developmental contribution from neural crest | 1.72e-10 | 92 |
brain grey matter | 2.61e-09 | 29 |
regional part of telencephalon | 2.61e-09 | 29 |
telencephalon | 2.61e-09 | 29 |
craniocervical region | 1.39e-08 | 36 |
gray matter | 2.45e-08 | 34 |
anterior region of body | 4.49e-08 | 43 |
cerebral cortex | 2.51e-07 | 21 |
cerebral hemisphere | 2.51e-07 | 21 |
pallium | 2.51e-07 | 21 |