FFCP PHASE1:Mm9::chr7:152100513..152100528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:152100513..152100528,-|id=chr7:152100513..152100528,-|ontology_enrichment_celltype=CL:0000117!6.03e-11!23;CL:0000337!6.03e-11!23;CL:0000055!4.82e-10!50;CL:0002319!1.62e-08!43;CL:0000221!6.35e-08!44;CL:0000133!6.35e-08!44;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.54e-12,23;CL:0000337,9.54e-12,23;CL:0002319,4.64e-09,43;CL:0000221,1.66e-08,44;CL:0000133,1.66e-08,44;CL:0000393,4.28e-08,39;CL:0000211,4.28e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.96e-22!52;UBERON:0005068!5.96e-22!52;UBERON:0006241!5.96e-22!52;UBERON:0007135!5.96e-22!52;UBERON:0000073!8.89e-22!75;UBERON:0001016!8.89e-22!75;UBERON:0001017!3.56e-21!73;UBERON:0005743!3.56e-21!73;UBERON:0002346!4.96e-21!71;UBERON:0003075!4.96e-21!71;UBERON:0007284!4.96e-21!71;UBERON:0000955!7.42e-21!50;UBERON:0006238!7.42e-21!50;UBERON:0002616!2.71e-20!49;UBERON:0000033!6.29e-18!63;UBERON:0004121!1.29e-17!102;UBERON:0000924!1.29e-17!102;UBERON:0006601!1.29e-17!102;UBERON:0002020!6.94e-17!34;UBERON:0003056!1.79e-15!49;UBERON:0003080!2.71e-15!40;UBERON:0002780!1.03e-14!39;UBERON:0001890!1.03e-14!39;UBERON:0006240!1.03e-14!39;UBERON:0002791!8.82e-14!29;UBERON:0003528!8.82e-14!29;UBERON:0001893!8.82e-14!29;UBERON:0000956!5.11e-10!21;UBERON:0001869!5.11e-10!21;UBERON:0000203!5.11e-10!21;UBERON:0007811!6.71e-09!86;UBERON:0002619!7.35e-09!17;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12;UBERON:0000153!1.91e-07!94;UBERON:0002021!2.07e-07!10;UBERON:0000411!2.07e-07!10;UBERON:0001950!2.07e-07!10;UBERON:0000025!9.82e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.38e-25,54;UBERON:0001049,3.18e-23,52;UBERON:0005068,3.18e-23,52;UBERON:0006241,3.18e-23,52;UBERON:0007135,3.18e-23,52;UBERON:0001016,4.94e-23,75;UBERON:0001017,2.22e-22,73;UBERON:0002346,1.51e-20,64;UBERON:0003075,1.51e-20,64;UBERON:0007284,1.51e-20,64;UBERON:0000955,1.02e-19,47;UBERON:0006238,1.02e-19,47;UBERON:0002616,4.00e-19,46;UBERON:0002020,3.40e-18,34;UBERON:0004121,1.23e-16,95;UBERON:0000924,1.23e-16,95;UBERON:0006601,1.23e-16,95;UBERON:0010314,1.59e-16,92;UBERON:0003080,4.95e-16,40;UBERON:0003056,5.95e-16,49;UBERON:0002780,2.09e-15,39;UBERON:0001890,2.09e-15,39;UBERON:0006240,2.09e-15,39;UBERON:0003528,7.99e-15,29;UBERON:0002791,7.99e-15,29;UBERON:0001893,7.99e-15,29;UBERON:0010371,1.95e-14,73;UBERON:0000956,9.68e-11,21;UBERON:0001869,9.68e-11,21;UBERON:0000203,9.68e-11,21;UBERON:0002619,1.75e-09,17;UBERON:0003076,5.89e-08,12;UBERON:0003057,5.89e-08,12;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.645616617207881,0.84473233291,0.936258105287974,0.513653904676515,0.319088635981346,0.342401459862411,1.39872643870396,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,90.9112771714936,1.48936426801328,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,11.5825072537531,15.3079166141467,22.5762505158868,6.25913075478431,11.3373081317832,5.71184075109627,15.5543919259427,6.01941612989059,7.18762821824858,0.503347818173209,0.725362142011344,0,24.9541652954869,21.7765414353455,9.7977697532714,6.67644320836673,32.268449735594,7.60597684207415,11.1818695582814,18.6751907183339,22.9474427906757,28.6771245144423,28.419204597844,77.2968285137484,76.8436610643109,3.11068836925433,11.8805225731888,6.09942387919008,599.581416263584,505.12635315634,3.1847607795888,3.1629005436018,9.19218786610021,693.730050296149,1351.82584830788,1125.93588876826,5.80299666012853,4.48289453651807,14.5855743755893,2156.13030128767,1679.28362833453,1023.59546185685,220.382181934303,509.263502218391,21.6223357157349,4.39211921332468,7.40601289046498,0.579728977403356,0,0,1.61910957491345,0,0,9.97155382935438,1.87473354835864,9.35229616570328,8.83348936275851,0.14084341977668,0,0,0,5.41227602528035,4.56047757855178,5.05524445014783,9.59144589640104,0,1.48442139064825,5.20455980298408,3.34912026143355,7.61031140944993,4.52167921657868,1.52865319276416,2.89033160058254,0.494389935468748,0,0,1.45590164952668,1.54589062922275,1.45462575940567,0,21.3729981818429,33.0925796765259,0,0.239630249011841,0,0,117.286070653976,59.9325789692401,20.356005042284,98.5583895490208,216.84670781612,190.749424905676,271.916356901562,2.95334155165917,0.622034853050465,3.0326731012041,1.05220927943237,1.95180664444056,0.689706313300419,1.98068342785884,4.9732589885786,4.08218994907967,3.84341160854549,5.99691037182265,8.2785078636485,0.431135985865684,0.189106080167819,0.175951124163949,1.09597866213787,1.11218899690239,2.089512999133,2.88094990971121,3.58261680273288,0,0,1.13665399758237,1.03562886267751,1.64168241986767,1.98068267607116,0.23674473558521,0,0.771335564436891,0.465067889500816,2.68273401399619,1.05088808130453,1.81015834904829,0.820837320395476,0.56748166682099,1.60819986167866,1.09775057645525,1.34206418760372,48.7872680668775,5.9684675179985,0,0,2.55945900642281,1.16118335930219,0.257734922644187,1.00841762311671,0.667134131534611,0.380451252225118,3.32170343081158,1.4822905925161,2.01068167040216,0.596869416123452,0.779856348476481,0.898819408654221,1.29682829924817,0.995706366271836,1.70701110857774,1.71372768914593,1.1270773567308,0.814605311381257,1.74557238450863,0.631222379012867,0.379419222745544,1.03327103585722,1.09899109488962,0.740382983530803,0.296452627087149,1.33476084572875,0.393117990226406,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.162135226775035,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,1.01847051465113,1.40814148973101,0.502518772325447,0.238043640886014,2.53673742215138,0.472905432318573,0.664394068946325,1.43509291791738,0.163863314715738,1.03610989119537,0.723245292907558,0,0.54390568381871,0.491764273019036,0,56.1927064957272,247.316658709549,20.6558031174611,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,2.42886421004937,1.46127928955656,0.395287777946524,46.2702695647402,0.141940085208269,6.05423052468668,3.09485222771795,1.31976098378028,0,5.09839335925461,8.16273603804828,9.9960692270626,2.65771703592696,3.68922177532713,2.84271122485043,6.90714086007261,7.84294232446387,5.68866164284469,10.5418608574999,13.4076206222643,18.0432991049508,1.08036656418786,1.29358683782755,1.07168517515796,0.886701168211368,4.63758925765383,5.43011767986999,31.3598897588037,0.938686832254841,0.847328283455281,0.661585194164886,0,0.645857706783622,0.361877549568935,0.716234064018819,0.328281799490123,0,53.9587628850583,0,2.27025554759545,0.555583582109135,0,0.27338845544205,1.14389086603261,0,0,0.138199973804424,0,0.632671987162271,1.01659733563424,2.26811215725783,3.76358932826044,2.40198820120795,3.10187996685088,1.23980183588004,2.87931536182433,0.90730481304255,0.621339313086926,19.7292528539467,0.448549638131936,1.65458490457098,1.55560950675238,3.35815541042101,3.37912250981556,1.87771581833206,24.0878111961308,17.0920731413909,29.9564309824248,18.4339204005034,0,4.05450430580328,2.97861775777999,0.649604114888975,0,0.198681354781265,1.08175904567972,0.443068581523732,0.201932899896295,0.15241361331,0.705783295957884,0.584747284438515,0.865906574762965,0.467507608726276,0.226730383615211,0.443971906748129,3.13998498133165,0.671538465456314,1.35232715822533,2.064507229963,0.549454872801795,1.2862102744744,1.50471631210609,57.0399361043237,124.748139093445,76.7679988008791,583.441554056819,358.298157840046,441.150036075585,267.308910091795,265.239188699066,306.777410882307,164.647779137079,4.15149390336707,0,1.19513524027894,0.486213434136588,2.51535795153579,1.65459157605013,1.55572709461131,2.06035057238894,0.320919209591815,1.01078884705519,0.760437899670719,1.32038438970253,4.12022632867483,1.79270426733634,3.96304735793732,1.42888107384922,2.66533949673168,7.5234595980845,1.23625770240992,1.32479028120958,2.05721551431249,2.66213709239006,3.33810665926249,3.48831399917588,2.1645157495526,6.26148098398406,2.56099162021882,1.8414879800649,4.34573164306758,0.561142271657738,1.06771516311757,5.71325997778268,1.22769312950907,4.18329471202108,2.50778594275484,1.74867404556562,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.695603506861264|short_description=p@chr7:152100513..152100528,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:152100513..152100528,- | |||
|description=CAGE_peak_at_chr7:152100513..152100528,- | |||
|id=chr7:152100513..152100528,- | |||
|ontology_enrichment_celltype=CL:0000117!6.03e-11!23;CL:0000337!6.03e-11!23;CL:0000055!4.82e-10!50;CL:0002319!1.62e-08!43;CL:0000221!6.35e-08!44;CL:0000133!6.35e-08!44;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.54e-12,23;CL:0000337,9.54e-12,23;CL:0002319,4.64e-09,43;CL:0000221,1.66e-08,44;CL:0000133,1.66e-08,44;CL:0000393,4.28e-08,39;CL:0000211,4.28e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.96e-22!52;UBERON:0005068!5.96e-22!52;UBERON:0006241!5.96e-22!52;UBERON:0007135!5.96e-22!52;UBERON:0000073!8.89e-22!75;UBERON:0001016!8.89e-22!75;UBERON:0001017!3.56e-21!73;UBERON:0005743!3.56e-21!73;UBERON:0002346!4.96e-21!71;UBERON:0003075!4.96e-21!71;UBERON:0007284!4.96e-21!71;UBERON:0000955!7.42e-21!50;UBERON:0006238!7.42e-21!50;UBERON:0002616!2.71e-20!49;UBERON:0000033!6.29e-18!63;UBERON:0004121!1.29e-17!102;UBERON:0000924!1.29e-17!102;UBERON:0006601!1.29e-17!102;UBERON:0002020!6.94e-17!34;UBERON:0003056!1.79e-15!49;UBERON:0003080!2.71e-15!40;UBERON:0002780!1.03e-14!39;UBERON:0001890!1.03e-14!39;UBERON:0006240!1.03e-14!39;UBERON:0002791!8.82e-14!29;UBERON:0003528!8.82e-14!29;UBERON:0001893!8.82e-14!29;UBERON:0000956!5.11e-10!21;UBERON:0001869!5.11e-10!21;UBERON:0000203!5.11e-10!21;UBERON:0007811!6.71e-09!86;UBERON:0002619!7.35e-09!17;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12;UBERON:0000153!1.91e-07!94;UBERON:0002021!2.07e-07!10;UBERON:0000411!2.07e-07!10;UBERON:0001950!2.07e-07!10;UBERON:0000025!9.82e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.38e-25,54;UBERON:0001049,3.18e-23,52;UBERON:0005068,3.18e-23,52;UBERON:0006241,3.18e-23,52;UBERON:0007135,3.18e-23,52;UBERON:0001016,4.94e-23,75;UBERON:0001017,2.22e-22,73;UBERON:0002346,1.51e-20,64;UBERON:0003075,1.51e-20,64;UBERON:0007284,1.51e-20,64;UBERON:0000955,1.02e-19,47;UBERON:0006238,1.02e-19,47;UBERON:0002616,4.00e-19,46;UBERON:0002020,3.40e-18,34;UBERON:0004121,1.23e-16,95;UBERON:0000924,1.23e-16,95;UBERON:0006601,1.23e-16,95;UBERON:0010314,1.59e-16,92;UBERON:0003080,4.95e-16,40;UBERON:0003056,5.95e-16,49;UBERON:0002780,2.09e-15,39;UBERON:0001890,2.09e-15,39;UBERON:0006240,2.09e-15,39;UBERON:0003528,7.99e-15,29;UBERON:0002791,7.99e-15,29;UBERON:0001893,7.99e-15,29;UBERON:0010371,1.95e-14,73;UBERON:0000956,9.68e-11,21;UBERON:0001869,9.68e-11,21;UBERON:0000203,9.68e-11,21;UBERON:0002619,1.75e-09,17;UBERON:0003076,5.89e-08,12;UBERON:0003057,5.89e-08,12;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.645616617207881,0.84473233291,0.936258105287974,0.513653904676515,0.319088635981346,0.342401459862411,1.39872643870396,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,90.9112771714936,1.48936426801328,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,11.5825072537531,15.3079166141467,22.5762505158868,6.25913075478431,11.3373081317832,5.71184075109627,15.5543919259427,6.01941612989059,7.18762821824858,0.503347818173209,0.725362142011344,0,24.9541652954869,21.7765414353455,9.7977697532714,6.67644320836673,32.268449735594,7.60597684207415,11.1818695582814,18.6751907183339,22.9474427906757,28.6771245144423,28.419204597844,77.2968285137484,76.8436610643109,3.11068836925433,11.8805225731888,6.09942387919008,599.581416263584,505.12635315634,3.1847607795888,3.1629005436018,9.19218786610021,693.730050296149,1351.82584830788,1125.93588876826,5.80299666012853,4.48289453651807,14.5855743755893,2156.13030128767,1679.28362833453,1023.59546185685,220.382181934303,509.263502218391,21.6223357157349,4.39211921332468,7.40601289046498,0.579728977403356,0,0,1.61910957491345,0,0,9.97155382935438,1.87473354835864,9.35229616570328,8.83348936275851,0.14084341977668,0,0,0,5.41227602528035,4.56047757855178,5.05524445014783,9.59144589640104,0,1.48442139064825,5.20455980298408,3.34912026143355,7.61031140944993,4.52167921657868,1.52865319276416,2.89033160058254,0.494389935468748,0,0,1.45590164952668,1.54589062922275,1.45462575940567,0,21.3729981818429,33.0925796765259,0,0.239630249011841,0,0,117.286070653976,59.9325789692401,20.356005042284,98.5583895490208,216.84670781612,190.749424905676,271.916356901562,2.95334155165917,0.622034853050465,3.0326731012041,1.05220927943237,1.95180664444056,0.689706313300419,1.98068342785884,4.9732589885786,4.08218994907967,3.84341160854549,5.99691037182265,8.2785078636485,0.431135985865684,0.189106080167819,0.175951124163949,1.09597866213787,1.11218899690239,2.089512999133,2.88094990971121,3.58261680273288,0,0,1.13665399758237,1.03562886267751,1.64168241986767,1.98068267607116,0.23674473558521,0,0.771335564436891,0.465067889500816,2.68273401399619,1.05088808130453,1.81015834904829,0.820837320395476,0.56748166682099,1.60819986167866,1.09775057645525,1.34206418760372,48.7872680668775,5.9684675179985,0,0,2.55945900642281,1.16118335930219,0.257734922644187,1.00841762311671,0.667134131534611,0.380451252225118,3.32170343081158,1.4822905925161,2.01068167040216,0.596869416123452,0.779856348476481,0.898819408654221,1.29682829924817,0.995706366271836,1.70701110857774,1.71372768914593,1.1270773567308,0.814605311381257,1.74557238450863,0.631222379012867,0.379419222745544,1.03327103585722,1.09899109488962,0.740382983530803,0.296452627087149,1.33476084572875,0.393117990226406,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0.162135226775035,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,1.01847051465113,1.40814148973101,0.502518772325447,0.238043640886014,2.53673742215138,0.472905432318573,0.664394068946325,1.43509291791738,0.163863314715738,1.03610989119537,0.723245292907558,0,0.54390568381871,0.491764273019036,0,56.1927064957272,247.316658709549,20.6558031174611,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,2.42886421004937,1.46127928955656,0.395287777946524,46.2702695647402,0.141940085208269,6.05423052468668,3.09485222771795,1.31976098378028,0,5.09839335925461,8.16273603804828,9.9960692270626,2.65771703592696,3.68922177532713,2.84271122485043,6.90714086007261,7.84294232446387,5.68866164284469,10.5418608574999,13.4076206222643,18.0432991049508,1.08036656418786,1.29358683782755,1.07168517515796,0.886701168211368,4.63758925765383,5.43011767986999,31.3598897588037,0.938686832254841,0.847328283455281,0.661585194164886,0,0.645857706783622,0.361877549568935,0.716234064018819,0.328281799490123,0,53.9587628850583,0,2.27025554759545,0.555583582109135,0,0.27338845544205,1.14389086603261,0,0,0.138199973804424,0,0.632671987162271,1.01659733563424,2.26811215725783,3.76358932826044,2.40198820120795,3.10187996685088,1.23980183588004,2.87931536182433,0.90730481304255,0.621339313086926,19.7292528539467,0.448549638131936,1.65458490457098,1.55560950675238,3.35815541042101,3.37912250981556,1.87771581833206,24.0878111961308,17.0920731413909,29.9564309824248,18.4339204005034,0,4.05450430580328,2.97861775777999,0.649604114888975,0,0.198681354781265,1.08175904567972,0.443068581523732,0.201932899896295,0.15241361331,0.705783295957884,0.584747284438515,0.865906574762965,0.467507608726276,0.226730383615211,0.443971906748129,3.13998498133165,0.671538465456314,1.35232715822533,2.064507229963,0.549454872801795,1.2862102744744,1.50471631210609,57.0399361043237,124.748139093445,76.7679988008791,583.441554056819,358.298157840046,441.150036075585,267.308910091795,265.239188699066,306.777410882307,164.647779137079,4.15149390336707,0,1.19513524027894,0.486213434136588,2.51535795153579,1.65459157605013,1.55572709461131,2.06035057238894,0.320919209591815,1.01078884705519,0.760437899670719,1.32038438970253,4.12022632867483,1.79270426733634,3.96304735793732,1.42888107384922,2.66533949673168,7.5234595980845,1.23625770240992,1.32479028120958,2.05721551431249,2.66213709239006,3.33810665926249,3.48831399917588,2.1645157495526,6.26148098398406,2.56099162021882,1.8414879800649,4.34573164306758,0.561142271657738,1.06771516311757,5.71325997778268,1.22769312950907,4.18329471202108,2.50778594275484,1.74867404556562,0.467863216890817,0.859484216193193,0.57386499620653,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr7:152100513..152100528,- | |||
}} |
Latest revision as of 15:44, 4 August 2015
Short description: | p@chr7:152100513..152100528, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:152100513..152100528, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.54e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.54e-12 | 23 |
neural cell | 4.64e-09 | 43 |
ectodermal cell | 1.66e-08 | 44 |
neurectodermal cell | 1.66e-08 | 44 |
electrically responsive cell | 4.28e-08 | 39 |
electrically active cell | 4.28e-08 | 39 |