FFCP PHASE1:Mm9::chr7:25292310..25292329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=232969|HGNC=|MCL_coexpression_id=22|UniProt=E9PZE0|association_with_transcript=161bp_to_ENSMUST00000085998_5end|description=CAGE_peak_5_at_Zfp428_5end|id=chr7:25292310..25292329,+|ontology_enrichment_celltype=CL:0000540!8.21e-17!33;CL:0000047!8.21e-17!33;CL:0000031!8.21e-17!33;CL:0000404!8.21e-17!33;CL:0002319!1.02e-15!43;CL:0000221!1.04e-15!44;CL:0000133!1.04e-15!44;CL:0000117!4.15e-15!23;CL:0000337!4.15e-15!23;CL:0000393!6.85e-13!39;CL:0000211!6.85e-13!39;CL:0000055!7.18e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-21,23;CL:0000337,1.96e-21,23;CL:0000540,1.94e-20,33;CL:0000047,1.94e-20,33;CL:0000031,1.94e-20,33;CL:0000404,1.94e-20,33;CL:0002319,2.16e-18,43;CL:0000221,1.05e-17,44;CL:0000133,1.05e-17,44;CL:0000393,1.17e-15,39;CL:0000211,1.17e-15,39;CL:0002321,3.75e-07,70;CL:0002609,4.80e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.08e-28!73;UBERON:0005743!8.08e-28!73;UBERON:0000073!2.85e-26!75;UBERON:0001016!2.85e-26!75;UBERON:0002346!1.32e-23!71;UBERON:0003075!1.32e-23!71;UBERON:0007284!1.32e-23!71;UBERON:0004121!1.01e-21!102;UBERON:0000924!1.01e-21!102;UBERON:0006601!1.01e-21!102;UBERON:0001049!1.59e-21!52;UBERON:0005068!1.59e-21!52;UBERON:0006241!1.59e-21!52;UBERON:0007135!1.59e-21!52;UBERON:0000033!1.71e-19!63;UBERON:0000955!2.71e-19!50;UBERON:0006238!2.71e-19!50;UBERON:0002616!5.65e-19!49;UBERON:0003056!6.04e-19!49;UBERON:0002020!2.39e-18!34;UBERON:0003080!1.40e-17!40;UBERON:0002780!4.20e-17!39;UBERON:0001890!4.20e-17!39;UBERON:0006240!4.20e-17!39;UBERON:0002791!8.25e-15!29;UBERON:0003528!8.25e-15!29;UBERON:0001893!8.25e-15!29;UBERON:0000153!1.29e-10!94;UBERON:0000956!1.43e-10!21;UBERON:0001869!1.43e-10!21;UBERON:0000203!1.43e-10!21;UBERON:0007811!2.07e-10!86;UBERON:0002619!3.36e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-29,73;UBERON:0001016,4.05e-28,75;UBERON:0002346,1.32e-27,64;UBERON:0003075,1.32e-27,64;UBERON:0007284,1.32e-27,64;UBERON:0002020,1.78e-25,34;UBERON:0000073,2.33e-25,54;UBERON:0001049,8.37e-25,52;UBERON:0005068,8.37e-25,52;UBERON:0006241,8.37e-25,52;UBERON:0007135,8.37e-25,52;UBERON:0004121,1.26e-24,95;UBERON:0000924,1.26e-24,95;UBERON:0006601,1.26e-24,95;UBERON:0003056,5.18e-24,49;UBERON:0010371,3.63e-23,73;UBERON:0003080,1.96e-22,40;UBERON:0002780,1.05e-21,39;UBERON:0001890,1.05e-21,39;UBERON:0006240,1.05e-21,39;UBERON:0010314,2.35e-20,92;UBERON:0003528,4.89e-20,29;UBERON:0002791,4.89e-20,29;UBERON:0001893,4.89e-20,29;UBERON:0000955,7.80e-20,47;UBERON:0006238,7.80e-20,47;UBERON:0002616,2.34e-19,46;UBERON:0000956,1.35e-14,21;UBERON:0001869,1.35e-14,21;UBERON:0000203,1.35e-14,21;UBERON:0002619,6.02e-11,17;UBERON:0002021,1.94e-07,10;UBERON:0000411,1.94e-07,10;UBERON:0001950,1.94e-07,10;UBERON:0002240,6.54e-07,6;UBERON:0005174,6.54e-07,6;UBERON:0001137,6.54e-07,6;UBERON:0001948,8.49e-07,5;UBERON:0002315,8.49e-07,5|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0.595745707205312,0,0,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0.782391344348039,2.18025156380447,1.97717564461025,1.1665793944457,0.699932108126813,0,0,0,0,0,0.286533439938757,0,10.5204559646991,15.869729378161,10.1413024560989,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,2.30530983192933,2.7996195323289,3.24014251996058,3.78584930432488,6.56997264128748,4.63823935998388,4.04219637409348,2.01275489138296,3.67687514644008,2.20231761998777,2.042997409363,0.921639199537461,8.44072241473241,9.97215315266265,6.25096044668112,1.67509799400829,2.8138130501584,1.83357897332172,7.07108605136802,5.97961059356232,10.0655700745662,0,0.151143120213571,0,0,0,0,0,0,0,0,0.519572009205738,0,0.704217098883403,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0,0,1.38788261412909,1.52232739156071,0.691846491768175,0.753613202763113,0.823120949949934,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,0,0.878342391034642,0.209446706813455,0,0.239630249011841,0.599902730993408,0.127070227073065,1.79748767285787,0.915001205637253,4.52355667606312,2.78118912307642,0.767146371990992,0.83115217823824,1.78465389374533,0.611036183101898,0.248813941220186,0.252722758433675,0,2.60240885925407,1.37941262660084,1.98068342785884,0.452114453507145,1.29269348387523,1.66547836370305,1.59292931751539,0.776110112217047,0.646703978798527,1.32374256117473,1.23165786914764,1.53437012699302,1.11218899690239,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0,1.03562886267751,2.34526059981096,1.98068267607116,0.473489471170421,0.983821158737019,0.925602677324269,0.232533944750408,0.268273401399619,0.350296027101508,1.15191894939436,0.820837320395476,0.486412857275134,0.438599962275997,0.219550115291051,0.536825675041487,0.420579897128254,2.26390147234426,0,0,1.2797295032114,0.928946687441754,0.644337306610467,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0,0,0,0,1.70701110857774,1.14248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.379419222745544,0,0,0,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,0.167506257441816,0,0.390267295715598,0.315270288212382,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0.655739781506702,0,1.57754109708128,2.34263246577983,0.646270193198397,0.716906393857656,1.11399337041197,1.98153571552183,0.809621403349789,1.16902343164525,0.790575555893047,1.28528526568723,0.141940085208269,1.06839362200353,0.488660878060728,0,0,1.69946445308487,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,1.68166288917581,1.92903331528433,1.59606210278046,1.60531935841864,1.64549020602121,1.2178597964584,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0,0,0,1.11255181206306,0.170870880797853,1.03193433981611,0.555583582109135,0,0,0.228778173206523,0,0.279902904647316,0.276399947608848,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,0.87345025498471,0.134864346384821,0,0,0,0,1.12738587736838,1.04661582230785,1.32366792365678,0.972255941720238,0.904118764344118,0.168956125490778,0.58678619322877,0.651021924219751,1.04859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,1.33524244314275,0.51968329191118,0,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,0.460325236507177,3.43737308063638,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,1.35096360967266,3.17199686288943,2.07104124700728,1.97195960409936,1.99512436700516,1.36586884603307,0.486213434136588,1.67690530102386,2.02227859295016,0.666740183404846,1.85431551515005,0.320919209591815,1.51618327058278,2.28131369901216,1.50901073108861,0.936415074698824,1.53660365771686,0.804096565378586,0.952587382566147,0.811190281613988,1.15745532278223,1.23625770240992,1.32479028120958,1.02860775715625,0.887379030796687,0.953744759789284,0.872078499793971,1.12931256498397,0.676916863133412,1.09756783723664,0.526139422875686,0.950628796921032,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,1.54936841185966,0.771626443924566,3.74715866906919,0.935726433781634,1.50409737833809,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p5@Zfp428}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232969 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9PZE0 | |||
|association_with_transcript=161bp_to_ENSMUST00000085998_5end | |||
|cluster_id=chr7:25292310..25292329,+ | |||
|description=CAGE_peak_5_at_Zfp428_5end | |||
|id=chr7:25292310..25292329,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.21e-17!33;CL:0000047!8.21e-17!33;CL:0000031!8.21e-17!33;CL:0000404!8.21e-17!33;CL:0002319!1.02e-15!43;CL:0000221!1.04e-15!44;CL:0000133!1.04e-15!44;CL:0000117!4.15e-15!23;CL:0000337!4.15e-15!23;CL:0000393!6.85e-13!39;CL:0000211!6.85e-13!39;CL:0000055!7.18e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-21,23;CL:0000337,1.96e-21,23;CL:0000540,1.94e-20,33;CL:0000047,1.94e-20,33;CL:0000031,1.94e-20,33;CL:0000404,1.94e-20,33;CL:0002319,2.16e-18,43;CL:0000221,1.05e-17,44;CL:0000133,1.05e-17,44;CL:0000393,1.17e-15,39;CL:0000211,1.17e-15,39;CL:0002321,3.75e-07,70;CL:0002609,4.80e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.08e-28!73;UBERON:0005743!8.08e-28!73;UBERON:0000073!2.85e-26!75;UBERON:0001016!2.85e-26!75;UBERON:0002346!1.32e-23!71;UBERON:0003075!1.32e-23!71;UBERON:0007284!1.32e-23!71;UBERON:0004121!1.01e-21!102;UBERON:0000924!1.01e-21!102;UBERON:0006601!1.01e-21!102;UBERON:0001049!1.59e-21!52;UBERON:0005068!1.59e-21!52;UBERON:0006241!1.59e-21!52;UBERON:0007135!1.59e-21!52;UBERON:0000033!1.71e-19!63;UBERON:0000955!2.71e-19!50;UBERON:0006238!2.71e-19!50;UBERON:0002616!5.65e-19!49;UBERON:0003056!6.04e-19!49;UBERON:0002020!2.39e-18!34;UBERON:0003080!1.40e-17!40;UBERON:0002780!4.20e-17!39;UBERON:0001890!4.20e-17!39;UBERON:0006240!4.20e-17!39;UBERON:0002791!8.25e-15!29;UBERON:0003528!8.25e-15!29;UBERON:0001893!8.25e-15!29;UBERON:0000153!1.29e-10!94;UBERON:0000956!1.43e-10!21;UBERON:0001869!1.43e-10!21;UBERON:0000203!1.43e-10!21;UBERON:0007811!2.07e-10!86;UBERON:0002619!3.36e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-29,73;UBERON:0001016,4.05e-28,75;UBERON:0002346,1.32e-27,64;UBERON:0003075,1.32e-27,64;UBERON:0007284,1.32e-27,64;UBERON:0002020,1.78e-25,34;UBERON:0000073,2.33e-25,54;UBERON:0001049,8.37e-25,52;UBERON:0005068,8.37e-25,52;UBERON:0006241,8.37e-25,52;UBERON:0007135,8.37e-25,52;UBERON:0004121,1.26e-24,95;UBERON:0000924,1.26e-24,95;UBERON:0006601,1.26e-24,95;UBERON:0003056,5.18e-24,49;UBERON:0010371,3.63e-23,73;UBERON:0003080,1.96e-22,40;UBERON:0002780,1.05e-21,39;UBERON:0001890,1.05e-21,39;UBERON:0006240,1.05e-21,39;UBERON:0010314,2.35e-20,92;UBERON:0003528,4.89e-20,29;UBERON:0002791,4.89e-20,29;UBERON:0001893,4.89e-20,29;UBERON:0000955,7.80e-20,47;UBERON:0006238,7.80e-20,47;UBERON:0002616,2.34e-19,46;UBERON:0000956,1.35e-14,21;UBERON:0001869,1.35e-14,21;UBERON:0000203,1.35e-14,21;UBERON:0002619,6.02e-11,17;UBERON:0002021,1.94e-07,10;UBERON:0000411,1.94e-07,10;UBERON:0001950,1.94e-07,10;UBERON:0002240,6.54e-07,6;UBERON:0005174,6.54e-07,6;UBERON:0001137,6.54e-07,6;UBERON:0001948,8.49e-07,5;UBERON:0002315,8.49e-07,5 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0.595745707205312,0,0,0,0,0,0,0.190023419456374,0,0,0,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.101376931219515,0.183546752161682,0.782391344348039,2.18025156380447,1.97717564461025,1.1665793944457,0.699932108126813,0,0,0,0,0,0.286533439938757,0,10.5204559646991,15.869729378161,10.1413024560989,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,2.30530983192933,2.7996195323289,3.24014251996058,3.78584930432488,6.56997264128748,4.63823935998388,4.04219637409348,2.01275489138296,3.67687514644008,2.20231761998777,2.042997409363,0.921639199537461,8.44072241473241,9.97215315266265,6.25096044668112,1.67509799400829,2.8138130501584,1.83357897332172,7.07108605136802,5.97961059356232,10.0655700745662,0,0.151143120213571,0,0,0,0,0,0,0,0,0.519572009205738,0,0.704217098883403,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0,0,1.38788261412909,1.52232739156071,0.691846491768175,0.753613202763113,0.823120949949934,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,0,0.878342391034642,0.209446706813455,0,0.239630249011841,0.599902730993408,0.127070227073065,1.79748767285787,0.915001205637253,4.52355667606312,2.78118912307642,0.767146371990992,0.83115217823824,1.78465389374533,0.611036183101898,0.248813941220186,0.252722758433675,0,2.60240885925407,1.37941262660084,1.98068342785884,0.452114453507145,1.29269348387523,1.66547836370305,1.59292931751539,0.776110112217047,0.646703978798527,1.32374256117473,1.23165786914764,1.53437012699302,1.11218899690239,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0,1.03562886267751,2.34526059981096,1.98068267607116,0.473489471170421,0.983821158737019,0.925602677324269,0.232533944750408,0.268273401399619,0.350296027101508,1.15191894939436,0.820837320395476,0.486412857275134,0.438599962275997,0.219550115291051,0.536825675041487,0.420579897128254,2.26390147234426,0,0,1.2797295032114,0.928946687441754,0.644337306610467,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0,0,0,0,1.70701110857774,1.14248512609729,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.379419222745544,0,0,0,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,0.167506257441816,0,0.390267295715598,0.315270288212382,0.664394068946325,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0.655739781506702,0,1.57754109708128,2.34263246577983,0.646270193198397,0.716906393857656,1.11399337041197,1.98153571552183,0.809621403349789,1.16902343164525,0.790575555893047,1.28528526568723,0.141940085208269,1.06839362200353,0.488660878060728,0,0,1.69946445308487,1.209294227859,0.754420319023592,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,1.68166288917581,1.92903331528433,1.59606210278046,1.60531935841864,1.64549020602121,1.2178597964584,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0,0,0,1.11255181206306,0.170870880797853,1.03193433981611,0.555583582109135,0,0,0.228778173206523,0,0.279902904647316,0.276399947608848,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,0.87345025498471,0.134864346384821,0,0,0,0,1.12738587736838,1.04661582230785,1.32366792365678,0.972255941720238,0.904118764344118,0.168956125490778,0.58678619322877,0.651021924219751,1.04859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,1.33524244314275,0.51968329191118,0,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0.358855426437903,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,0.460325236507177,3.43737308063638,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,1.35096360967266,3.17199686288943,2.07104124700728,1.97195960409936,1.99512436700516,1.36586884603307,0.486213434136588,1.67690530102386,2.02227859295016,0.666740183404846,1.85431551515005,0.320919209591815,1.51618327058278,2.28131369901216,1.50901073108861,0.936415074698824,1.53660365771686,0.804096565378586,0.952587382566147,0.811190281613988,1.15745532278223,1.23625770240992,1.32479028120958,1.02860775715625,0.887379030796687,0.953744759789284,0.872078499793971,1.12931256498397,0.676916863133412,1.09756783723664,0.526139422875686,0.950628796921032,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,1.54936841185966,0.771626443924566,3.74715866906919,0.935726433781634,1.50409737833809,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Zfp428 | |||
}} |
Latest revision as of 09:37, 26 September 2015
Short description: | p5@Zfp428 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zfp428_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 161bp_to_ENSMUST00000085998_5end |
EntrezGene: | Zfp428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-21 | 23 |
neuron | 1.94e-20 | 33 |
neuronal stem cell | 1.94e-20 | 33 |
neuroblast | 1.94e-20 | 33 |
electrically signaling cell | 1.94e-20 | 33 |
neural cell | 2.16e-18 | 43 |
ectodermal cell | 1.05e-17 | 44 |
neurectodermal cell | 1.05e-17 | 44 |
electrically responsive cell | 1.17e-15 | 39 |
electrically active cell | 1.17e-15 | 39 |
embryonic cell | 3.75e-07 | 70 |
neuron of cerebral cortex | 4.80e-07 | 6 |