FFCP PHASE1:Mm9::chr9:106355684..106355744,+: Difference between revisions
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{{FFCP|EntrezGene=59092|HGNC=|UniProt=P57724,Q8BP63,Q9DB01|association_with_transcript=-424bp_to_NM_021567_5end|description=CAGE_peak_5_at_Pcbp4_5end|id=chr9:106355684..106355744,+|ontology_enrichment_celltype=CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000055!1.75e-10!50;CL:0000221!2.89e-10!44;CL:0000133!2.89e-10!44;CL:0002319!4.63e-10!43;CL:0000393!1.42e-08!39;CL:0000211!1.42e-08!39;CL:0000540!1.59e-07!33;CL:0000047!1.59e-07!33;CL:0000031!1.59e-07!33;CL:0000404!1.59e-07!33;CL:0002321!5.33e-07!70;CL:0000220!5.33e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,8.34e-15,23;CL:0000337,8.34e-15,23;CL:0000221,3.36e-11,44;CL:0000133,3.36e-11,44;CL:0002319,6.30e-11,43;CL:0000393,2.30e-08,39;CL:0000211,2.30e-08,39;CL:0002321,3.08e-08,70;CL:0000540,8.19e-08,33;CL:0000047,8.19e-08,33;CL:0000031,8.19e-08,33;CL:0000404,8.19e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.97e-22!73;UBERON:0005743!2.97e-22!73;UBERON:0000025!3.70e-22!114;UBERON:0004111!5.06e-22!122;UBERON:0000073!2.08e-21!75;UBERON:0001016!2.08e-21!75;UBERON:0001049!1.89e-20!52;UBERON:0005068!1.89e-20!52;UBERON:0006241!1.89e-20!52;UBERON:0007135!1.89e-20!52;UBERON:0000033!8.39e-20!63;UBERON:0000955!7.31e-19!50;UBERON:0006238!7.31e-19!50;UBERON:0002616!1.65e-18!49;UBERON:0004121!4.78e-18!102;UBERON:0000924!4.78e-18!102;UBERON:0006601!4.78e-18!102;UBERON:0002346!8.30e-18!71;UBERON:0003075!8.30e-18!71;UBERON:0007284!8.30e-18!71;UBERON:0003056!4.13e-16!49;UBERON:0002020!1.23e-15!34;UBERON:0003080!7.43e-14!40;UBERON:0002780!2.34e-13!39;UBERON:0001890!2.34e-13!39;UBERON:0006240!2.34e-13!39;UBERON:0002791!1.01e-12!29;UBERON:0003528!1.01e-12!29;UBERON:0001893!1.01e-12!29;UBERON:0000477!1.10e-09!154;UBERON:0000119!5.48e-09!183;UBERON:0000483!1.13e-08!181;UBERON:0007811!4.12e-08!86;UBERON:0000956!5.08e-08!21;UBERON:0001869!5.08e-08!21;UBERON:0000203!5.08e-08!21;UBERON:0002619!1.04e-07!17;UBERON:0003076!1.57e-07!12;UBERON:0003057!1.57e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.64e-26,54;UBERON:0001017,3.45e-25,73;UBERON:0001049,1.21e-24,52;UBERON:0005068,1.21e-24,52;UBERON:0006241,1.21e-24,52;UBERON:0007135,1.21e-24,52;UBERON:0002346,1.62e-24,64;UBERON:0003075,1.62e-24,64;UBERON:0007284,1.62e-24,64;UBERON:0001016,6.34e-24,75;UBERON:0000025,2.24e-22,114;UBERON:0004121,3.62e-22,95;UBERON:0000924,3.62e-22,95;UBERON:0006601,3.62e-22,95;UBERON:0004111,2.23e-21,122;UBERON:0010371,1.28e-20,73;UBERON:0000955,2.06e-20,47;UBERON:0006238,2.06e-20,47;UBERON:0002020,2.22e-20,34;UBERON:0002616,6.04e-20,46;UBERON:0010314,5.43e-19,92;UBERON:0003056,6.95e-18,49;UBERON:0003528,2.06e-16,29;UBERON:0002791,2.06e-16,29;UBERON:0001893,2.06e-16,29;UBERON:0003080,6.58e-16,40;UBERON:0002780,2.97e-15,39;UBERON:0001890,2.97e-15,39;UBERON:0006240,2.97e-15,39;UBERON:0000119,1.07e-10,176;UBERON:0000483,1.16e-10,174;UBERON:0000956,4.83e-10,21;UBERON:0001869,4.83e-10,21;UBERON:0000203,4.83e-10,21;UBERON:0002619,5.84e-10,17;UBERON:0003076,1.02e-09,12;UBERON:0003057,1.02e-09,12;UBERON:0002420,5.26e-08,8;UBERON:0007245,5.26e-08,8;UBERON:0010009,5.26e-08,8;UBERON:0010011,5.26e-08,8;UBERON:0000454,5.26e-08,8|phase1_expression=0.480446541314382,0,0,1.51232105653415,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0.380046838912748,0.504060259519861,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0,2.26614272356039,1.82478476195126,2.20256102594018,1.56478268869608,3.70642765846759,5.27246838562732,5.63846707315422,1.81982348112971,2.87505128729943,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,5.26022798234954,6.87688273053643,6.33831403506179,1.35537812827653,0.889294796111139,0,0,0,2.39680088414724,3.45796474789399,1.03689612308478,1.89008313664367,0.420649922702764,4.57041575046086,3.53389665522582,1.5923803897944,1.24599112323707,1.83843757322004,2.20231761998777,4.97980618532232,3.99376986466233,7.64940468835124,9.78917786545783,7.8137005583514,6.97957497503452,5.6276261003168,4.73674568108111,3.83017161115768,6.83384067835694,4.28718725398191,0.37863096666592,0.151143120213571,2.02905142091174,0,2.03991400112325,3.2382191498269,3.89865850468601,0.896053774194671,1.82577746171277,0.681721290312231,0.259786004602869,0,1.54927761754349,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0.922461989024234,0.150722640552623,0.823120949949934,0,0.741584903203122,1.44599356919912,0,0.323533699894818,0,0.484875253135222,0,8.19786231632332,11.1006754611131,0,0,0,0,3.2953940669061,2.74500361691176,3.39266750704734,2.43354048269187,1.53429274398198,3.94797284663164,2.43361894601636,1.62942982160506,0.124406970610093,0.252722758433675,1.05220927943237,0.650602214813519,1.83921683546778,0.720248519221397,1.35634336052144,2.85753296435577,2.43416068541215,2.81105173679186,5.69147415625834,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.1990342668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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59092 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P57724,Q8BP63,Q9DB01 | |||
|association_with_transcript=-424bp_to_NM_021567_5end | |||
|cluster_id=chr9:106355684..106355744,+ | |||
|description=CAGE_peak_5_at_Pcbp4_5end | |||
|id=chr9:106355684..106355744,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000055!1.75e-10!50;CL:0000221!2.89e-10!44;CL:0000133!2.89e-10!44;CL:0002319!4.63e-10!43;CL:0000393!1.42e-08!39;CL:0000211!1.42e-08!39;CL:0000540!1.59e-07!33;CL:0000047!1.59e-07!33;CL:0000031!1.59e-07!33;CL:0000404!1.59e-07!33;CL:0002321!5.33e-07!70;CL:0000220!5.33e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.34e-15,23;CL:0000337,8.34e-15,23;CL:0000221,3.36e-11,44;CL:0000133,3.36e-11,44;CL:0002319,6.30e-11,43;CL:0000393,2.30e-08,39;CL:0000211,2.30e-08,39;CL:0002321,3.08e-08,70;CL:0000540,8.19e-08,33;CL:0000047,8.19e-08,33;CL:0000031,8.19e-08,33;CL:0000404,8.19e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.97e-22!73;UBERON:0005743!2.97e-22!73;UBERON:0000025!3.70e-22!114;UBERON:0004111!5.06e-22!122;UBERON:0000073!2.08e-21!75;UBERON:0001016!2.08e-21!75;UBERON:0001049!1.89e-20!52;UBERON:0005068!1.89e-20!52;UBERON:0006241!1.89e-20!52;UBERON:0007135!1.89e-20!52;UBERON:0000033!8.39e-20!63;UBERON:0000955!7.31e-19!50;UBERON:0006238!7.31e-19!50;UBERON:0002616!1.65e-18!49;UBERON:0004121!4.78e-18!102;UBERON:0000924!4.78e-18!102;UBERON:0006601!4.78e-18!102;UBERON:0002346!8.30e-18!71;UBERON:0003075!8.30e-18!71;UBERON:0007284!8.30e-18!71;UBERON:0003056!4.13e-16!49;UBERON:0002020!1.23e-15!34;UBERON:0003080!7.43e-14!40;UBERON:0002780!2.34e-13!39;UBERON:0001890!2.34e-13!39;UBERON:0006240!2.34e-13!39;UBERON:0002791!1.01e-12!29;UBERON:0003528!1.01e-12!29;UBERON:0001893!1.01e-12!29;UBERON:0000477!1.10e-09!154;UBERON:0000119!5.48e-09!183;UBERON:0000483!1.13e-08!181;UBERON:0007811!4.12e-08!86;UBERON:0000956!5.08e-08!21;UBERON:0001869!5.08e-08!21;UBERON:0000203!5.08e-08!21;UBERON:0002619!1.04e-07!17;UBERON:0003076!1.57e-07!12;UBERON:0003057!1.57e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.64e-26,54;UBERON:0001017,3.45e-25,73;UBERON:0001049,1.21e-24,52;UBERON:0005068,1.21e-24,52;UBERON:0006241,1.21e-24,52;UBERON:0007135,1.21e-24,52;UBERON:0002346,1.62e-24,64;UBERON:0003075,1.62e-24,64;UBERON:0007284,1.62e-24,64;UBERON:0001016,6.34e-24,75;UBERON:0000025,2.24e-22,114;UBERON:0004121,3.62e-22,95;UBERON:0000924,3.62e-22,95;UBERON:0006601,3.62e-22,95;UBERON:0004111,2.23e-21,122;UBERON:0010371,1.28e-20,73;UBERON:0000955,2.06e-20,47;UBERON:0006238,2.06e-20,47;UBERON:0002020,2.22e-20,34;UBERON:0002616,6.04e-20,46;UBERON:0010314,5.43e-19,92;UBERON:0003056,6.95e-18,49;UBERON:0003528,2.06e-16,29;UBERON:0002791,2.06e-16,29;UBERON:0001893,2.06e-16,29;UBERON:0003080,6.58e-16,40;UBERON:0002780,2.97e-15,39;UBERON:0001890,2.97e-15,39;UBERON:0006240,2.97e-15,39;UBERON:0000119,1.07e-10,176;UBERON:0000483,1.16e-10,174;UBERON:0000956,4.83e-10,21;UBERON:0001869,4.83e-10,21;UBERON:0000203,4.83e-10,21;UBERON:0002619,5.84e-10,17;UBERON:0003076,1.02e-09,12;UBERON:0003057,1.02e-09,12;UBERON:0002420,5.26e-08,8;UBERON:0007245,5.26e-08,8;UBERON:0010009,5.26e-08,8;UBERON:0010011,5.26e-08,8;UBERON:0000454,5.26e-08,8 | |||
|phase1_expression=0.480446541314382,0,0,1.51232105653415,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0.380046838912748,0.504060259519861,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0,2.26614272356039,1.82478476195126,2.20256102594018,1.56478268869608,3.70642765846759,5.27246838562732,5.63846707315422,1.81982348112971,2.87505128729943,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,5.26022798234954,6.87688273053643,6.33831403506179,1.35537812827653,0.889294796111139,0,0,0,2.39680088414724,3.45796474789399,1.03689612308478,1.89008313664367,0.420649922702764,4.57041575046086,3.53389665522582,1.5923803897944,1.24599112323707,1.83843757322004,2.20231761998777,4.97980618532232,3.99376986466233,7.64940468835124,9.78917786545783,7.8137005583514,6.97957497503452,5.6276261003168,4.73674568108111,3.83017161115768,6.83384067835694,4.28718725398191,0.37863096666592,0.151143120213571,2.02905142091174,0,2.03991400112325,3.2382191498269,3.89865850468601,0.896053774194671,1.82577746171277,0.681721290312231,0.259786004602869,0,1.54927761754349,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0.922461989024234,0.150722640552623,0.823120949949934,0,0.741584903203122,1.44599356919912,0,0.323533699894818,0,0.484875253135222,0,8.19786231632332,11.1006754611131,0,0,0,0,3.2953940669061,2.74500361691176,3.39266750704734,2.43354048269187,1.53429274398198,3.94797284663164,2.43361894601636,1.62942982160506,0.124406970610093,0.252722758433675,1.05220927943237,0.650602214813519,1.83921683546778,0.720248519221397,1.35634336052144,2.85753296435577,2.43416068541215,2.81105173679186,5.69147415625834,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0.540186184383045,0.473489471170421,0.787056926989615,1.69693824176116,1.62773761325285,1.60964040839772,5.02090972178829,3.45575684818309,2.46251196118643,1.86458261955468,1.16959989940266,0.439100230582101,0.671032093801859,1.89260953707715,4.32199371992995,0,0.528901133327089,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0,0,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0.814605311381257,0.775809948670503,2.73529697572242,3.35153646758564,8.26616828685772,5.65195420228949,10.488758933353,1.77871576252289,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.763877555344259,0.287696137450811,1.78348749452539,1.37280706594041,7.18841032636773,3.72140947668503,2.18426371180192,2.02063102357689,1.25578189465339,6.27176577772377,0.739012760666419,0.37898282354097,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0.780534591431195,0.472905432318573,0,0.797273843287435,1.14704320301017,1.20879487306127,2.02508682014116,0,0,0,1.10374698521893,2.72936002979246,2.81308047821288,1.14754461763673,0,0,0.780877488593277,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,1.92792789853084,0.141940085208269,1.78065603667255,2.28041743095006,1.97964147567043,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0.340439605753788,1.08036656418786,0.905510786479282,0.643011105094777,0.532020700926821,1.42695054081656,1.15184314421485,1.8267896946876,0.469343416127421,0.42366414172764,0.882113592219848,0.32977250588296,0,0.120625849856312,0.358117032009409,0.492422699235184,0,2.96680483216816,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0,0,0.539457385539283,1.40510874733071,0.26175594198403,0,0,0.56369293868419,0,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.704143431874524,0.39061315453185,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.295379054349154,0,0.228620419965,0.201652370273681,0.292373642219257,0,0,0.226730383615211,0.443971906748129,0.448569283047378,0.503653849092235,1.35232715822533,2.064507229963,1.64836461840539,1.71494703263253,0.501572104035363,2.82375921308533,2.30162618253588,1.71868654031819,1.89038500578056,5.48066015816514,3.0215755895588,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,0.726511433089237,0.798049746802062,1.36586884603307,0.729320151204882,0.628839487883947,1.83843508450014,1.55572709461131,1.64828045791115,0.962757628775446,0.758091635291392,0.50695859978048,1.13175804831646,0.561849044819294,0.832326981263301,0.804096565378586,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,1.32479028120958,0.685738504770831,0.177475806159338,0.715308569841963,0.436039249896986,1.03520318456864,0.761531471025089,1.09756783723664,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,1.28055827088233,0.818462086339379,0.77468420592983,1.54325288784913,1.99848462350357,0.935726433781634,1.71896843238639,1.72159498861959,0.661774257358546,0 | |||
|short_description=p5@Pcbp4 | |||
}} |
Latest revision as of 02:53, 26 September 2015
Short description: | p5@Pcbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pcbp4_5end |
Coexpression cluster: | NA |
Association with transcript: | -424bp_to_NM_021567_5end |
EntrezGene: | Pcbp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.34e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.34e-15 | 23 |
ectodermal cell | 3.36e-11 | 44 |
neurectodermal cell | 3.36e-11 | 44 |
neural cell | 6.30e-11 | 43 |
electrically responsive cell | 2.30e-08 | 39 |
electrically active cell | 2.30e-08 | 39 |
embryonic cell | 3.08e-08 | 70 |
neuron | 8.19e-08 | 33 |
neuronal stem cell | 8.19e-08 | 33 |
neuroblast | 8.19e-08 | 33 |
electrically signaling cell | 8.19e-08 | 33 |