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FFCP PHASE1:Mm9::chr11:88922011..88922113,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:88922011..88922113,- |short_description=p1@Dgke |description=CAGE_peak_1_at_Dgke_5end |association_with_transcript=0bp_to_ENSMUST00000000285,ENSMUST000001...")
 
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{{FFCP
{{FFCP
|id=chr11:88922011..88922113,-
|DHSsupport=NA
|short_description=p1@Dgke
|DPIdataset=NA
|description=CAGE_peak_1_at_Dgke_5end
|association_with_transcript=0bp_to_ENSMUST00000000285,ENSMUST00000152772,NM_019505_5end
|EntrezGene=56077
|EntrezGene=56077
|HGNC=
|HGNC=
|MCL_coexpression_id=113
|TSSclassifier=NA
|UniProt=Q9R1C6,F2Z490
|UniProt=Q9R1C6,F2Z490
|association_with_transcript=0bp_to_ENSMUST00000000285,ENSMUST00000152772,NM_019505_5end
|cluster_id=chr11:88922011..88922113,-
|description=CAGE_peak_1_at_Dgke_5end
|id=chr11:88922011..88922113,-
|ontology_enrichment_celltype=CL:0000117!2.29e-08!23;CL:0000337!2.29e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.29e-08,23;CL:0000337,2.29e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.38e-13,54;UBERON:0010371,1.70e-13,73;UBERON:0010314,2.35e-13,92;UBERON:0001049,1.29e-12,52;UBERON:0005068,1.29e-12,52;UBERON:0006241,1.29e-12,52;UBERON:0007135,1.29e-12,52;UBERON:0002346,2.50e-12,64;UBERON:0003075,2.50e-12,64;UBERON:0007284,2.50e-12,64;UBERON:0002020,1.26e-11,34;UBERON:0000955,2.23e-11,47;UBERON:0006238,2.23e-11,47;UBERON:0004121,3.57e-11,95;UBERON:0000924,3.57e-11,95;UBERON:0006601,3.57e-11,95;UBERON:0002616,7.31e-11,46;UBERON:0003056,9.85e-11,49;UBERON:0003528,1.76e-10,29;UBERON:0002791,1.76e-10,29;UBERON:0001893,1.76e-10,29;UBERON:0003080,3.03e-10,40;UBERON:0001017,5.47e-10,73;UBERON:0002780,1.02e-09,39;UBERON:0001890,1.02e-09,39;UBERON:0006240,1.02e-09,39;UBERON:0001016,4.17e-09,75;UBERON:0000956,4.51e-07,21;UBERON:0001869,4.51e-07,21;UBERON:0000203,4.51e-07,21;UBERON:0000483,5.26e-07,174
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19085064810423,7.0674104335688,8.16574331738295,5.59205381778233,1.69107881605257,5.83114529571517,5.12921320417003,5.83353565032143,3.35815541042101,3.8859908862879,4.92900402312167,8.33308063001281,10.8005124758482,7.24752362478018,6.33666013767304,115.028047908657,5.47358081283443,14.8930887889,35.2085430269824,52.0967684392371,64.1740775943486,56.4918612743854,60.5527061415767,71.787145913133,73.4633616154198,94.9782663989038,116.169793841785,105.929237646003,102.501043213236,9.9761368790693,10.211353855207,8.34338866468124,7.72269235274761,10.8186172658027,4.31669693537719,5.49454872801795,5.14484109789758,4.01257683228291,43.4858918815141,34.5243927380383,34.3737308063638,28.5276282690521,33.5690434687615,40.0358765616541,35.7761925122857,35.5753750547134,40.7828168085784,45.5629074341602,2.17953429926771,8.77854721482268,7.0000778359195,5.83456120963906,3.98265008993166,4.41224420280034,9.55660929546946,8.24140228955577,4.81378814387723,8.33900798820532,7.60437899670719,8.11093267960128,7.49132059759059,7.81106859339405,7.8112237779634,4.76293691283074,8.34367146802959,8.48800570040302,7.00546031365621,9.71512872887022,7.20025430009372,4.43689515398344,7.39152188836695,8.57543858130738,10.0697037044404,7.86915853392591,5.85369513192872,7.89209134313529,8.55565917228929,9.53941861818155,10.202611558679,7.88035859004508,6.13846564754534,9.29621047115796,8.68079749415136,9.74261253957989,6.55008503647143,7.52048689169044,4.78220830172108,5.29419405886837,8.11537424671475
|phase1_expression=9.12848428497326,1.04692622291808,2.27499619694768,2.72217790176147,4.50806156951712,4.8684988854448,3.03696432774183,11.879345756625,8.024957162645,8.19225842126977,5.30775701499065,6.62108919661292,14.8944635040149,13.8998439846206,4.33042690360362,6.47920855647443,4.19737126876888,13.4071420277251,14.3970155286026,9.76096199135469,13.7770130044733,4.26951090163807,6.52999472847338,2.23989391910769,2.06468352960453,2.29692785646008,0.430761996159075,3.878482188346,2.47030445293286,3.52842181663903,4.21287970245079,2.54012269383853,5.53558308826113,0,4.04392267651784,4.3221007793208,4.28755648150975,0,0.7813353445238,0,1.17646297606203,0,0,3.77690453926732,5.47435428585379,4.77221555620372,3.9119567217402,2.18025156380447,2.19686182734472,4.27745777963423,2.79972843250725,1.43752564364972,22.1473039996212,21.7608642603403,16.4685961579807,3.34437266846731,4.29800159908135,3.09403255366465,17.601532094785,19.0436752537932,13.3104594736298,1.35537812827653,1.77858959222228,1.7997994345628,0.988866362566974,2.8419204597844,2.69640099466564,2.68952813725088,13.9980976616445,14.4456354014909,13.4607975264884,8.56952953211411,7.95126747425809,12.7390431183552,10.0637744569148,5.51531271966013,36.3382407297983,28.9850257453376,36.4047483817297,18.7278528576875,14.9124859071928,16.6692278578163,35.177057874174,28.138130501584,28.2676758387099,19.4454866412621,13.3829379951157,16.9623495701024,3.55913108665965,4.00529268565963,8.69593466105033,1.72084775396277,2.719885334831,1.07940638327563,1.94932925234301,4.48026887097336,5.05599912474307,0.340860645156116,0.519572009205738,1.06001872353102,5.35204995151386,2.56652954828636,5.09610479413291,0,2.59789249213457,2.53359865475099,1.51657333504435,4.90990682791958,9.58070169494535,13.8051189330287,4.3371331691534,7.61163695780353,6.45723392316964,4.37095657602605,9.17191915658498,7.79132866243988,7.41584903203122,9.9773556274739,0.884610551949874,5.17653919831709,6.62524555381181,6.78825354389311,16.775258509631,55.9211322292055,44.6121485512659,3.57639877292028,5.51149572727233,4.19931911695385,5.20987930999565,43.1397041485889,35.6850470198529,25.00521607046,44.4990259692228,43.7273432034865,38.0252121543995,36.0175604010422,3.56437773476107,7.34001126599549,6.31806896084187,41.6674874655218,5.59517904739626,3.67843367093557,5.22180176435513,5.12396380641431,10.4776208693045,15.2455327138971,17.0537138698706,72.9543505484024,3.88022387279116,4.16033376369202,5.98233822157426,5.2606975782618,6.11703948296315,3.48252166522167,4.93877127379064,2.7864797354589,4.91549231119264,2.05878325691772,6.53576048609863,7.04227626620706,6.56672967947069,5.22179978236943,9.94327889457883,11.0187969778546,7.71335564436891,8.8362899005155,9.92611585178591,10.5088808130453,11.3546296440302,13.6258995185649,16.5380371473546,16.5205985790626,12.5143565715899,14.3600868073598,37.4316108444146,26.4464853814761,5.94753809370836,2.64450566663544,2.98603550749328,6.50262681209228,5.28356591420583,6.45387278794696,4.66993892074228,4.1849637744763,6.64340686162316,4.94096864172033,3.77002813200404,5.37182474511107,4.874102177978,4.49409704327111,3.8904848977445,5.77509692437665,4.74169752382704,4.68418901699888,5.63538678365402,4.68398054044223,4.84881217919064,5.04977903210294,5.69128834118316,6.34723636312289,4.55296310739987,6.91024117962083,3.26097889795864,2.8363667971736,3.73462090715086,2.02375901146368,1.82574109249653,2.65294875727659,3.56476192493988,4.02774592431135,3.08056930872567,3.29473695825698,4.31304619582064,5.58211421502755,5.30464044294753,4.79899868099512,3.58794827043824,3.37710464954357,13.1174765018289,3.7898282354097,4.88894929326078,6.11082308790677,5.86725620721255,9.21284415929987,9.99783291721258,8.58588050574315,11.1920952315396,14.3952048271704,14.0320196418589,11.9620219742489,9.49767400262426,16.7792907954553,1.50791283939272,3.26343410291226,11.3105782794378,9.3818493743609,40.6192992669114,34.1086007983311,2.13115428989678,6.5642441073137,1.89304931649754,6.63745865304285,7.53981892064796,5.01834475700359,3.7875774594007,5.09537755419898,3.64329631507405,4.9683495844923,5.92931666919785,40.1651645527259,7.66476460124651,4.62970569534864,6.67836533349662,7.58862565673663,6.63725691699814,3.64170954232472,2.41858845571801,4.33791683438566,3.83892460745005,4.61152721915891,5.94385074286909,5.45300594216258,5.34746067577082,9.48110273807448,5.27093042874994,10.3135543248187,23.8307724027652,4.14140516272013,5.04498866752743,6.64444808597936,7.62563004661776,6.95638388648075,8.06290200950393,3.65357938937519,10.3255551548033,10.3797714723272,5.51320995137405,9.72828892354732,9.04200789497071,9.288190438936,8.11731939221328,9.84845398470368,4.37221254944776,37.2704857041124,5.98048082792484,6.81076664278634,4.07427960213366,5.65105371014073,7.24479406921433,6.17701067657611,8.15896463970505,8.11718423477216,7.32459861163446,4.77335309007557,4.58687190692646,5.08298667817122,4.10420295122845,5.01811910434725,7.20596460362386,5.39457385539283,7.19085064810423,7.0674104335688,8.16574331738295,5.59205381778233,1.69107881605257,5.83114529571517,5.12921320417003,5.83353565032143,3.35815541042101,3.8859908862879,4.92900402312167,8.33308063001281,10.8005124758482,7.24752362478018,6.33666013767304,115.028047908657,5.47358081283443,14.8930887889,35.2085430269824,52.0967684392371,64.1740775943486,56.4918612743854,60.5527061415767,71.787145913133,73.4633616154198,94.9782663989038,116.169793841785,105.929237646003,102.501043213236,9.9761368790693,10.211353855207,8.34338866468124,7.72269235274761,10.8186172658027,4.31669693537719,5.49454872801795,5.14484109789758,4.01257683228291,43.4858918815141,34.5243927380383,34.3737308063638,28.5276282690521,33.5690434687615,40.0358765616541,35.7761925122857,35.5753750547134,40.7828168085784,45.5629074341602,2.17953429926771,8.77854721482268,7.0000778359195,5.83456120963906,3.98265008993166,4.41224420280034,9.55660929546946,8.24140228955577,4.81378814387723,8.33900798820532,7.60437899670719,8.11093267960128,7.49132059759059,7.81106859339405,7.8112237779634,4.76293691283074,8.34367146802959,8.48800570040302,7.00546031365621,9.71512872887022,7.20025430009372,4.43689515398344,7.39152188836695,8.57543858130738,10.0697037044404,7.86915853392591,5.85369513192872,7.89209134313529,8.55565917228929,9.53941861818155,10.202611558679,7.88035859004508,6.13846564754534,9.29621047115796,8.68079749415136,9.74261253957989,6.55008503647143,7.52048689169044,4.78220830172108,5.29419405886837,8.11537424671475
|short_description=p1@Dgke
}}
}}

Latest revision as of 22:53, 25 September 2015

Short description:p1@Dgke
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dgke_5end
Coexpression cluster:MCL_coexpression_mm9:113
Association with transcript: 0bp_to_ENSMUST00000000285, ENSMUST00000152772, NM_019505_5end
EntrezGene:Dgke
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dgke

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.76
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.47
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C317.60
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.18
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.96
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D713.81
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I37.79
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B255.92
cerebellum, neonate N30.CNhs11135.1395-42I244.61
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A443.14
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F125.01
cortex, adult.CNhs10473.12-14D544.50
cortex, neonate N30.CNhs11107.1392-42F243.73
diencephalon, adult.CNhs10482.20-12F238.03
diencephalon, neonate N30.CNhs11201.1388-42B236.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G441.67
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C610.48
eyeball, neonate N01.CNhs11140.1532-43E715.25
eyeball, neonate N02.CNhs11205.1551-44G817.05
eyeball, neonate N16.CNhs11188.777-19A272.95
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C67.71
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E310.51
heart, neonate N03.CNhs11221.1349-25I211.35
heart, neonate N10.CNhs11118.749-24G113.63
heart, neonate N16.CNhs11209.782-15G116.54
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D312.51
heart, neonate N30.CNhs11202.1390-42D214.36
hippocampus, adult.CNhs10478.13-16E837.43
hippocampus, neonate N00.CNhs11228.627-43G126.45
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D55.69
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A314.40
lung, neonate N10.CNhs11219.750-23E614.03
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H216.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C240.62
medulla oblongata, neonate N30.CNhs11200.1396-42A334.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I940.17
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H39.29
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C49.85
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C937.27
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B5115.03
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I214.89
thymus, embryo E16.CNhs11002.456-26C535.21
thymus, embryo E17.CNhs10581.478-18C152.10
thymus, embryo E18.CNhs10595.1273-19G464.17
thymus, neonate N02.CNhs11181.1541-43F856.49
thymus, neonate N03.CNhs11137.2104-43C760.55
thymus, neonate N06.CNhs11197.681-26C471.79
thymus, neonate N07.CNhs11211.713-19D373.46
thymus, neonate N10.CNhs11194.748-24E494.98
thymus, neonate N20.CNhs11186.820-7A2116.17
thymus, neonate N25.CNhs11125.1362-25G7105.93
thymus, neonate N30.CNhs11132.1393-42G2102.50
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A143.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.56
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.29e-0823
neuroblast (sensu Vertebrata)2.29e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.38e-1354
ecto-epithelium1.70e-1373
structure with developmental contribution from neural crest2.35e-1392
neural tube1.29e-1252
neural rod1.29e-1252
future spinal cord1.29e-1252
neural keel1.29e-1252
neurectoderm2.50e-1264
neural plate2.50e-1264
presumptive neural plate2.50e-1264
gray matter1.26e-1134
brain2.23e-1147
future brain2.23e-1147
ectoderm-derived structure3.57e-1195
ectoderm3.57e-1195
presumptive ectoderm3.57e-1195
regional part of brain7.31e-1146
pre-chordal neural plate9.85e-1149
brain grey matter1.76e-1029
regional part of telencephalon1.76e-1029
telencephalon1.76e-1029
anterior neural tube3.03e-1040
central nervous system5.47e-1073
regional part of forebrain1.02e-0939
forebrain1.02e-0939
future forebrain1.02e-0939
nervous system4.17e-0975
cerebral cortex4.51e-0721
cerebral hemisphere4.51e-0721
pallium4.51e-0721
epithelium5.26e-07174
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