FFCP PHASE1:Mm9::chr12:112661324..112661344,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:112661324..112661344,+
|short_description=p@chr12:112661324..112661344,+
|description=CAGE_peak_at_chr12:112661324..112661344,+
|association_with_transcri...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:112661324..112661344,+ | |||
|description=CAGE_peak_at_chr12:112661324..112661344,+ | |||
|id=chr12:112661324..112661344,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.09e-08!6;CL:0000677!1.09e-08!6;CL:0000212!1.09e-08!6;CL:0000584!1.09e-08!6;CL:0002563!2.18e-08!9;CL:0002251!2.18e-08!9;CL:0000075!1.90e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.28e-10,6;CL:0000677,1.28e-10,6;CL:0000584,1.28e-10,6;CL:0000075,3.51e-09,7;CL:0002563,2.94e-07,9;CL:0002251,2.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.02e-27!43;UBERON:0005409!4.98e-21!59;UBERON:0000344!4.49e-19!15;UBERON:0001242!4.84e-18!13;UBERON:0000060!4.84e-18!13;UBERON:0001262!4.84e-18!13;UBERON:0004786!4.84e-18!13;UBERON:0004923!1.25e-13!24;UBERON:0000331!7.46e-10!3;UBERON:0002116!7.46e-10!3;UBERON:0001204!7.46e-10!3;UBERON:0001168!7.46e-10!3;UBERON:0004119!5.82e-09!130;UBERON:0000925!5.82e-09!130;UBERON:0006595!5.82e-09!130;UBERON:0003350!2.18e-08!9;UBERON:0004808!2.18e-08!9;UBERON:0001277!2.18e-08!9;UBERON:0001007!3.58e-08!128;UBERON:0001555!3.58e-08!128;UBERON:0007026!3.58e-08!128;UBERON:0004921!2.06e-07!126;UBERON:0004185!2.06e-07!126;UBERON:0000485!8.35e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.71e-30,31;UBERON:0005409,8.99e-20,47;UBERON:0001242,2.00e-18,13;UBERON:0001262,2.00e-18,13;UBERON:0004786,2.00e-18,13;UBERON:0000344,6.07e-16,15;UBERON:0002108,9.08e-16,4;UBERON:0004923,7.14e-10,24;UBERON:0000331,8.39e-10,3;UBERON:0002116,8.39e-10,3;UBERON:0001204,8.39e-10,3;UBERON:0001168,8.39e-10,3;UBERON:0004921,1.92e-07,114;UBERON:0001007,2.72e-07,116;UBERON:0001555,2.72e-07,116;UBERON:0007026,2.72e-07,116;UBERON:0003350,2.94e-07,9;UBERON:0004808,2.94e-07,9;UBERON:0001277,2.94e-07,9;UBERON:0004119,3.81e-07,118;UBERON:0000925,3.81e-07,118;UBERON:0006595,3.81e-07,118 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,3.62957053568196,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0,1.72269589234506,0,0.430942465371778,1.14014051673824,3.2763916868791,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,0.793351699990633,0,0,0,0.201683524623343,0,0,3.79623249235609,0.658795818896044,0.502670417600539,0.198956472041151,0,2.69645822596266,1.94524244887225,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.909998478779072,3.62957053568196,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0,1.72269589234506,0,0.430942465371778,1.14014051673824,3.2763916868791,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34276993854605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,0.793351699990633,0,0,0,0.201683524623343,0,0,3.79623249235609,0.658795818896044,0.502670417600539,0.198956472041151,0,2.69645822596266,1.94524244887225,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:112661324..112661344,+ | |||
}} | }} |
Latest revision as of 18:10, 4 August 2015
Short description: | p@chr12:112661324..112661344, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112661324..112661344, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.28e-10 | 6 |
gut absorptive cell | 1.28e-10 | 6 |
enterocyte | 1.28e-10 | 6 |
columnar/cuboidal epithelial cell | 3.51e-09 | 7 |
intestinal epithelial cell | 2.94e-07 | 9 |
epithelial cell of alimentary canal | 2.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.71e-30 | 31 |
gastrointestinal system | 8.99e-20 | 47 |
intestinal mucosa | 2.00e-18 | 13 |
wall of intestine | 2.00e-18 | 13 |
gastrointestinal system mucosa | 2.00e-18 | 13 |
mucosa | 6.07e-16 | 15 |
small intestine | 9.08e-16 | 4 |
organ component layer | 7.14e-10 | 24 |
ileal mucosa | 8.39e-10 | 3 |
ileum | 8.39e-10 | 3 |
mucosa of small intestine | 8.39e-10 | 3 |
wall of small intestine | 8.39e-10 | 3 |
subdivision of digestive tract | 1.92e-07 | 114 |
digestive system | 2.72e-07 | 116 |
digestive tract | 2.72e-07 | 116 |
primitive gut | 2.72e-07 | 116 |
epithelium of mucosa | 2.94e-07 | 9 |
gastrointestinal system epithelium | 2.94e-07 | 9 |
intestinal epithelium | 2.94e-07 | 9 |
endoderm-derived structure | 3.81e-07 | 118 |
endoderm | 3.81e-07 | 118 |
presumptive endoderm | 3.81e-07 | 118 |