FFCP PHASE1:Mm9::chr12:21395431..21395435,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:21395431..21395435,-
|short_description=p@chr12:21395431..21395435,-
|description=CAGE_peak_at_chr12:21395431..21395435,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:21395431..21395435,- | |||
|description=CAGE_peak_at_chr12:21395431..21395435,- | |||
|id=chr12:21395431..21395435,- | |||
|ontology_enrichment_celltype=CL:0000393!5.59e-21!39;CL:0000211!5.59e-21!39;CL:0000055!1.86e-20!50;CL:0000221!2.28e-18!44;CL:0000133!2.28e-18!44;CL:0002319!1.16e-17!43;CL:0000540!1.95e-17!33;CL:0000047!1.95e-17!33;CL:0000031!1.95e-17!33;CL:0000404!1.95e-17!33;CL:0002321!1.16e-15!70;CL:0000220!1.16e-15!70;CL:0000117!6.61e-10!23;CL:0000337!6.61e-10!23;CL:0000548!2.54e-09!115;CL:0000004!2.54e-09!115;CL:0000255!2.54e-09!115;CL:0000107!3.71e-09!9;CL:0002371!1.28e-08!118;CL:0000144!2.05e-08!121;CL:0000012!2.05e-08!121;CL:0000723!2.29e-08!91;CL:0000048!2.29e-08!91;CL:0000034!5.35e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.54e-26,33;CL:0000047,7.54e-26,33;CL:0000031,7.54e-26,33;CL:0000404,7.54e-26,33;CL:0000107,1.81e-25,9;CL:0002319,1.80e-22,43;CL:0000221,6.55e-22,44;CL:0000133,6.55e-22,44;CL:0000393,1.50e-21,39;CL:0000211,1.50e-21,39;CL:0002321,6.38e-13,70;CL:0000723,1.63e-12,91;CL:0000048,1.63e-12,91;CL:0000034,1.40e-11,97;CL:0002476,1.99e-10,2;CL:0000117,3.69e-09,23;CL:0000337,3.69e-09,23;CL:0002614,2.92e-07,3;CL:0002612,4.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.30e-10!11;UBERON:0002410!3.71e-09!9;UBERON:0000073!4.75e-08!75;UBERON:0001016!4.75e-08!75;UBERON:0001017!4.04e-07!73;UBERON:0005743!4.04e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.73e-27,11;UBERON:0002410,1.81e-25,9;UBERON:0010313,3.32e-15,3;UBERON:0002342,3.32e-15,3;UBERON:0002005,3.32e-15,3;UBERON:0005428,3.32e-15,3;UBERON:0005062,3.32e-15,3;UBERON:0000013,4.13e-15,3;UBERON:0001016,6.66e-12,75;UBERON:0001017,1.69e-10,73;UBERON:0004121,6.81e-09,95;UBERON:0000924,6.81e-09,95;UBERON:0006601,6.81e-09,95;UBERON:0002038,2.92e-07,3;UBERON:0009663,2.92e-07,3;UBERON:0009661,2.92e-07,3;UBERON:0000125,2.92e-07,3;UBERON:0002308,2.92e-07,3;UBERON:0002257,4.48e-07,3 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0,0,1.16210991097419,0,0.936258105287974,0,0.0797721589953364,0,0.524522414513984,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,1.01158230429799,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.4850653216486,1.05162480675691,0.571301968807607,0,0.61245399607477,0.670918297127655,0,0,0.638436690425939,0.307213066512487,0.527545150920775,0.274462930807229,0,0.279182999001381,2.25105044012672,1.06958773443767,1.17851434189467,0.854230084794618,1.1183966749518,0.37863096666592,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0.163934945376675,0,1.26203287766503,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,1.13230612315533,1.21443210502468,1.46127928955656,1.18586333383957,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,1.09060118843252,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0.30246421130683,0,0,0,1.16210991097419,0,0.936258105287974,0,0.0797721589953364,0,0.524522414513984,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,1.01158230429799,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.4850653216486,1.05162480675691,0.571301968807607,0,0.61245399607477,0.670918297127655,0,0,0.638436690425939,0.307213066512487,0.527545150920775,0.274462930807229,0,0.279182999001381,2.25105044012672,1.06958773443767,1.17851434189467,0.854230084794618,1.1183966749518,0.37863096666592,1.28471652181535,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.540186184383045,0,0,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,1.08781136763742,0,0,0,0,0.163934945376675,0,1.26203287766503,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,1.13230612315533,1.21443210502468,1.46127928955656,1.18586333383957,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,1.09060118843252,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:21395431..21395435,- | |||
}} | }} |
Latest revision as of 21:54, 4 August 2015
Short description: | p@chr12:21395431..21395435, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:21395431..21395435, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.54e-26 | 33 |
neuronal stem cell | 7.54e-26 | 33 |
neuroblast | 7.54e-26 | 33 |
electrically signaling cell | 7.54e-26 | 33 |
autonomic neuron | 1.81e-25 | 9 |
neural cell | 1.80e-22 | 43 |
ectodermal cell | 6.55e-22 | 44 |
neurectodermal cell | 6.55e-22 | 44 |
electrically responsive cell | 1.50e-21 | 39 |
electrically active cell | 1.50e-21 | 39 |
embryonic cell | 6.38e-13 | 70 |
somatic stem cell | 1.63e-12 | 91 |
multi fate stem cell | 1.63e-12 | 91 |
stem cell | 1.40e-11 | 97 |
bone marrow macrophage | 1.99e-10 | 2 |
CNS neuron (sensu Vertebrata) | 3.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.69e-09 | 23 |
neuron of the substantia nigra | 2.92e-07 | 3 |
neuron of the ventral spinal cord | 4.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.73e-27 | 11 |
autonomic nervous system | 1.81e-25 | 9 |
neural crest-derived structure | 3.32e-15 | 3 |
neural crest | 3.32e-15 | 3 |
enteric nervous system | 3.32e-15 | 3 |
vagal neural crest | 3.32e-15 | 3 |
neural fold | 3.32e-15 | 3 |
sympathetic nervous system | 4.13e-15 | 3 |
nervous system | 6.66e-12 | 75 |
central nervous system | 1.69e-10 | 73 |
ectoderm-derived structure | 6.81e-09 | 95 |
ectoderm | 6.81e-09 | 95 |
presumptive ectoderm | 6.81e-09 | 95 |
substantia nigra | 2.92e-07 | 3 |
telencephalic nucleus | 2.92e-07 | 3 |
midbrain nucleus | 2.92e-07 | 3 |
neural nucleus | 2.92e-07 | 3 |
nucleus of brain | 2.92e-07 | 3 |
ventral horn of spinal cord | 4.48e-07 | 3 |