FFCP PHASE1:Hg19::chr3:14444209..14444220,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6533 | |EntrezGene=6533 | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000484191_5end | |association_with_transcript=61bp_to_ENST00000484191_5end | ||
|cluster_id=chr3:14444209..14444220,+ | |||
|description=CAGE_peak_3_at_SLC6A6_5end | |description=CAGE_peak_3_at_SLC6A6_5end | ||
|id=chr3:14444209..14444220,+ | |id=chr3:14444209..14444220,+ |
Latest revision as of 05:41, 25 September 2015
Short description: | p3@SLC6A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC6A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000484191_5end |
EntrezGene: | SLC6A6 |
HGNC: | 11052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SLC6A6 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.68e-30 | 108 |
common myeloid progenitor | 2.68e-30 | 108 |
myeloid leukocyte | 7.33e-30 | 72 |
hematopoietic cell | 5.64e-28 | 177 |
leukocyte | 3.80e-27 | 136 |
hematopoietic stem cell | 7.58e-27 | 168 |
granulocyte monocyte progenitor cell | 4.29e-26 | 67 |
hematopoietic oligopotent progenitor cell | 1.24e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-24 | 161 |
defensive cell | 5.69e-23 | 48 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.03e-31 | 98 |
blood island | 1.03e-31 | 98 |
hemolymphoid system | 7.03e-28 | 108 |
bone marrow | 1.10e-23 | 76 |
immune system | 1.12e-20 | 93 |
bone element | 1.90e-20 | 82 |
connective tissue | 7.24e-20 | 371 |
skeletal element | 7.15e-17 | 90 |
skeletal system | 1.05e-14 | 100 |
lateral plate mesoderm | 2.99e-12 | 203 |
Showing 1 to 10 of 13 entries