UBERON:0009955: Difference between revisions
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|name=neurogenic placode | |name=neurogenic placode | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:07, 12 September 2014
| Name: | neurogenic placode | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Cranial placode with neurogenic potential[cjm]. Neurogenic placodes are transient ectodermal thickenings that form at the border of the neural plate and epidermis and give rise to sensory neurons of the cranial ganglia[ZFA]. The neurogenic placodes give rise to parts of various nerves and ganglia, the olfactory organ, parietal eye, parts of the inner ear, and the lateral line. There are 2 major series of neurogenic placodes, the dorsolateral and ventrolateral or epibranchial[PMID]" [PMID:11523831, Wikipedia:Neurogenic_placodes, ZFA:0001309] | ||
| Xrefs: |
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| Synonyms: |
"neurogenic placodes" EXACT PLURAL [ZFA:0001309] "placodae neurogenicae" RELATED LATIN [Wikipedia:Neurogenic_placodes] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002546(cranial placode) |
|---|
Children
| is a: | UBERON:0003050 (olfactory placode),UBERON:0003067 (dorsolateral placode) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009955 (neurogenic placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_3a60b0cd6868b4b766bca2e34977f532 | p10@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_3a60b0cd6868b4b766bca2e34977f532 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_3a60b0cd6868b4b766bca2e34977f532 | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_3a60b0cd6868b4b766bca2e34977f532 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_3a60b0cd6868b4b766bca2e34977f532 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_3a60b0cd6868b4b766bca2e34977f532 | p3@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_3a60b0cd6868b4b766bca2e34977f532 | p7@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_3a60b0cd6868b4b766bca2e34977f532 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_3a60b0cd6868b4b766bca2e34977f532 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_3a60b0cd6868b4b766bca2e34977f532 | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:182528388..182528403, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_3a60b0cd6868b4b766bca2e34977f532 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_3a60b0cd6868b4b766bca2e34977f532 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_3a60b0cd6868b4b766bca2e34977f532 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_3a60b0cd6868b4b766bca2e34977f532 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:172843796..172843799, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_3a60b0cd6868b4b766bca2e34977f532 | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_3a60b0cd6868b4b766bca2e34977f532 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_3a60b0cd6868b4b766bca2e34977f532 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_3a60b0cd6868b4b766bca2e34977f532 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_3a60b0cd6868b4b766bca2e34977f532 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_3a60b0cd6868b4b766bca2e34977f532 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_3a60b0cd6868b4b766bca2e34977f532 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_3a60b0cd6868b4b766bca2e34977f532 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_3a60b0cd6868b4b766bca2e34977f532 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_3a60b0cd6868b4b766bca2e34977f532 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_3a60b0cd6868b4b766bca2e34977f532 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_3a60b0cd6868b4b766bca2e34977f532 | p10@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr14:20649897..20649907, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr18:81327205..81327211, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_3a60b0cd6868b4b766bca2e34977f532 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_3a60b0cd6868b4b766bca2e34977f532 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_3a60b0cd6868b4b766bca2e34977f532 | p@chr15:89215306..89215315, + |
