FFCP PHASE1:Mm9::chr15:75724968..75724979,-: Difference between revisions
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|id=chr15:75724968..75724979,-
|short_description=p3@Naprt1
|description=CAGE_peak_3_at_Naprt1_5end
|association_with_transcript=-57bp_to_ENSMUST00000023237,NM_1726...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223646 | |EntrezGene=223646 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CC86 | |UniProt=Q8CC86 | ||
|association_with_transcript=-57bp_to_ENSMUST00000023237,NM_172607,uc007whi.1_5end | |||
|cluster_id=chr15:75724968..75724979,- | |||
|description=CAGE_peak_3_at_Naprt1_5end | |||
|id=chr15:75724968..75724979,- | |||
|ontology_enrichment_celltype=CL:0002563!6.89e-09!9;CL:0002251!6.89e-09!9;CL:0000239!1.18e-08!6;CL:0000677!1.18e-08!6;CL:0000212!1.18e-08!6;CL:0000584!1.18e-08!6;CL:0000075!3.13e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.89e-10,6;CL:0000677,1.89e-10,6;CL:0000584,1.89e-10,6;CL:0000075,5.78e-09,7;CL:0002563,5.61e-07,9;CL:0002251,5.61e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.16e-18!43;UBERON:0000344!1.06e-15!15;UBERON:0001242!1.99e-13!13;UBERON:0000060!1.99e-13!13;UBERON:0001262!1.99e-13!13;UBERON:0004786!1.99e-13!13;UBERON:0005409!9.93e-13!59;UBERON:0001007!4.76e-11!128;UBERON:0001555!4.76e-11!128;UBERON:0007026!4.76e-11!128;UBERON:0004119!1.14e-10!130;UBERON:0000925!1.14e-10!130;UBERON:0006595!1.14e-10!130;UBERON:0009854!2.81e-10!23;UBERON:0009856!2.81e-10!23;UBERON:0004921!8.56e-10!126;UBERON:0004185!8.56e-10!126;UBERON:0004923!2.20e-09!24;UBERON:0002107!3.09e-09!22;UBERON:0007499!3.09e-09!22;UBERON:0006925!3.09e-09!22;UBERON:0009497!3.09e-09!22;UBERON:0000015!3.09e-09!22;UBERON:0002423!3.09e-09!22;UBERON:0006235!3.09e-09!22;UBERON:0008835!3.09e-09!22;UBERON:0003894!3.09e-09!22;UBERON:0004161!3.09e-09!22;UBERON:0008836!3.09e-09!22;UBERON:0003350!6.89e-09!9;UBERON:0004808!6.89e-09!9;UBERON:0001277!6.89e-09!9;UBERON:0002365!1.22e-07!25;UBERON:0002330!1.22e-07!25;UBERON:0000485!6.50e-07!11;UBERON:0003929!6.65e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.88e-39,31;UBERON:0005409,1.22e-24,47;UBERON:0000344,6.11e-19,15;UBERON:0001242,8.20e-14,13;UBERON:0001262,8.20e-14,13;UBERON:0004786,8.20e-14,13;UBERON:0001007,1.38e-12,116;UBERON:0001555,1.38e-12,116;UBERON:0007026,1.38e-12,116;UBERON:0004119,2.64e-12,118;UBERON:0000925,2.64e-12,118;UBERON:0006595,2.64e-12,118;UBERON:0004923,2.76e-11,24;UBERON:0004921,2.67e-10,114;UBERON:0002108,4.99e-09,4;UBERON:0001155,2.95e-08,2;UBERON:0000059,2.95e-08,2;UBERON:0001962,1.08e-07,2;UBERON:0001961,1.08e-07,2;UBERON:0001744,1.08e-07,2;UBERON:0003350,5.61e-07,9;UBERON:0004808,5.61e-07,9;UBERON:0001277,5.61e-07,9 | |||
|phase1_expression=0,3.14077866875425,2.27499619694768,5.74682001482977,4.00716583957078,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,4.01962374880514,2.15380998079537,0.861884930743556,5.13063232532209,3.78045194639896,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.96502539580558,1.32225283331772,0,0,0,0.403367049246685,0.444756087689741,2.85338439168839,2.37264530772256,1.31759163779209,3.01602250560323,0.795825888164603,1.36474860983384,3.59527763461689,1.51296634912286,1.59313018603494,0,0,0,0,0,0,0.379419222745544,0.442830443938806,0.156998727841375,0.493588655687202,0.889357881261447,0,0,0.224862112384854,0,1.4470629585145,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,3.14077866875425,2.27499619694768,5.74682001482977,4.00716583957078,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,4.01962374880514,2.15380998079537,0.861884930743556,5.13063232532209,3.78045194639896,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.96502539580558,1.32225283331772,0,0,0,0.403367049246685,0.444756087689741,2.85338439168839,2.37264530772256,1.31759163779209,3.01602250560323,0.795825888164603,1.36474860983384,3.59527763461689,1.51296634912286,1.59313018603494,0,0,0,0,0,0,0.379419222745544,0.442830443938806,0.156998727841375,0.493588655687202,0.889357881261447,0,0,0.224862112384854,0,1.4470629585145,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p3@Naprt1 | |||
}} | }} |
Latest revision as of 23:59, 26 September 2015
Short description: | p3@Naprt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Naprt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -57bp_to_ENSMUST00000023237, NM_172607, uc007whi.1_5end |
EntrezGene: | Naprt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.89e-10 | 6 |
gut absorptive cell | 1.89e-10 | 6 |
enterocyte | 1.89e-10 | 6 |
columnar/cuboidal epithelial cell | 5.78e-09 | 7 |
intestinal epithelial cell | 5.61e-07 | 9 |
epithelial cell of alimentary canal | 5.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.88e-39 | 31 |
gastrointestinal system | 1.22e-24 | 47 |
mucosa | 6.11e-19 | 15 |
intestinal mucosa | 8.20e-14 | 13 |
wall of intestine | 8.20e-14 | 13 |
gastrointestinal system mucosa | 8.20e-14 | 13 |
digestive system | 1.38e-12 | 116 |
digestive tract | 1.38e-12 | 116 |
primitive gut | 1.38e-12 | 116 |
endoderm-derived structure | 2.64e-12 | 118 |
endoderm | 2.64e-12 | 118 |
presumptive endoderm | 2.64e-12 | 118 |
organ component layer | 2.76e-11 | 24 |
subdivision of digestive tract | 2.67e-10 | 114 |
small intestine | 4.99e-09 | 4 |
colon | 2.95e-08 | 2 |
large intestine | 2.95e-08 | 2 |
gut-associated lymphoid tissue | 1.08e-07 | 2 |
mucosa-associated lymphoid tissue | 1.08e-07 | 2 |
lymphoid tissue | 1.08e-07 | 2 |
epithelium of mucosa | 5.61e-07 | 9 |
gastrointestinal system epithelium | 5.61e-07 | 9 |
intestinal epithelium | 5.61e-07 | 9 |