FFCP PHASE1:Mm9::chr17:34987392..34987411,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34987392..34987411,+
|short_description=p5@Rdbp
|description=CAGE_peak_5_at_Rdbp_5end
|association_with_transcript=39bp_to_ENSMUST00000165953,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27632 | |EntrezGene=27632 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P19426,G3UY39 | |UniProt=P19426,G3UY39 | ||
|association_with_transcript=39bp_to_ENSMUST00000165953,ENSMUST00000173065_5end | |||
|cluster_id=chr17:34987392..34987411,+ | |||
|description=CAGE_peak_5_at_Rdbp_5end | |||
|id=chr17:34987392..34987411,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.60e-12!43;UBERON:0004119!4.02e-12!130;UBERON:0000925!4.02e-12!130;UBERON:0006595!4.02e-12!130;UBERON:0005409!8.39e-12!59;UBERON:0001007!1.62e-11!128;UBERON:0001555!1.62e-11!128;UBERON:0007026!1.62e-11!128;UBERON:0004921!5.91e-11!126;UBERON:0004185!5.91e-11!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.41e-11,31;UBERON:0004119,4.16e-10,118;UBERON:0000925,4.16e-10,118;UBERON:0006595,4.16e-10,118;UBERON:0005409,5.96e-10,47;UBERON:0001007,1.51e-09,116;UBERON:0001555,1.51e-09,116;UBERON:0007026,1.51e-09,116;UBERON:0004921,4.99e-09,114 | |||
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| ||
|short_description=p5@Rdbp | |||
}} | }} |
Latest revision as of 08:50, 26 September 2015
Short description: | p5@Rdbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rdbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENSMUST00000165953, ENSMUST00000173065_5end |
EntrezGene: | Rdbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.41e-11 | 31 |
endoderm-derived structure | 4.16e-10 | 118 |
endoderm | 4.16e-10 | 118 |
presumptive endoderm | 4.16e-10 | 118 |
gastrointestinal system | 5.96e-10 | 47 |
digestive system | 1.51e-09 | 116 |
digestive tract | 1.51e-09 | 116 |
primitive gut | 1.51e-09 | 116 |
subdivision of digestive tract | 4.99e-09 | 114 |