FFCP PHASE1:Mm9::chr17:37183500..37183545,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:37183500..37183545,+
|short_description=p4@Gabbr1
|description=CAGE_peak_4_at_Gabbr1_5end
|association_with_transcript=0bp_to_ENSMUST00000172789,uc008cmc....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54393 | |EntrezGene=54393 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TWR2 | |UniProt=Q3TWR2 | ||
|association_with_transcript=0bp_to_ENSMUST00000172789,uc008cmc.1_5end | |||
|cluster_id=chr17:37183500..37183545,+ | |||
|description=CAGE_peak_4_at_Gabbr1_5end | |||
|id=chr17:37183500..37183545,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.96e-15!33;CL:0000047!1.96e-15!33;CL:0000031!1.96e-15!33;CL:0000404!1.96e-15!33;CL:0000117!7.15e-15!23;CL:0000337!7.15e-15!23;CL:0000393!2.88e-14!39;CL:0000211!2.88e-14!39;CL:0002319!6.71e-14!43;CL:0000221!1.50e-13!44;CL:0000133!1.50e-13!44;CL:0000055!1.78e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.87e-21,23;CL:0000337,6.87e-21,23;CL:0000540,1.05e-20,33;CL:0000047,1.05e-20,33;CL:0000031,1.05e-20,33;CL:0000404,1.05e-20,33;CL:0000393,1.08e-17,39;CL:0000211,1.08e-17,39;CL:0002319,3.22e-16,43;CL:0000221,1.43e-15,44;CL:0000133,1.43e-15,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.83e-27!73;UBERON:0005743!4.83e-27!73;UBERON:0000073!1.06e-26!75;UBERON:0001016!1.06e-26!75;UBERON:0002346!2.42e-24!71;UBERON:0003075!2.42e-24!71;UBERON:0007284!2.42e-24!71;UBERON:0004121!8.94e-24!102;UBERON:0000924!8.94e-24!102;UBERON:0006601!8.94e-24!102;UBERON:0001049!1.36e-21!52;UBERON:0005068!1.36e-21!52;UBERON:0006241!1.36e-21!52;UBERON:0007135!1.36e-21!52;UBERON:0000955!3.98e-19!50;UBERON:0006238!3.98e-19!50;UBERON:0002616!7.70e-19!49;UBERON:0000033!1.22e-18!63;UBERON:0003056!4.94e-18!49;UBERON:0002020!8.45e-17!34;UBERON:0003080!4.28e-16!40;UBERON:0002780!1.91e-15!39;UBERON:0001890!1.91e-15!39;UBERON:0006240!1.91e-15!39;UBERON:0002791!2.84e-13!29;UBERON:0003528!2.84e-13!29;UBERON:0001893!2.84e-13!29;UBERON:0007811!9.63e-10!86;UBERON:0000153!4.30e-09!94;UBERON:0000956!2.72e-08!21;UBERON:0001869!2.72e-08!21;UBERON:0000203!2.72e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-31,73;UBERON:0001016,1.20e-30,75;UBERON:0002346,3.61e-27,64;UBERON:0003075,3.61e-27,64;UBERON:0007284,3.61e-27,64;UBERON:0004121,1.02e-26,95;UBERON:0000924,1.02e-26,95;UBERON:0006601,1.02e-26,95;UBERON:0000073,1.71e-25,54;UBERON:0001049,3.19e-24,52;UBERON:0005068,3.19e-24,52;UBERON:0006241,3.19e-24,52;UBERON:0007135,3.19e-24,52;UBERON:0002020,1.35e-21,34;UBERON:0010371,1.92e-21,73;UBERON:0000955,5.22e-19,47;UBERON:0006238,5.22e-19,47;UBERON:0002616,1.32e-18,46;UBERON:0003056,1.35e-18,49;UBERON:0003080,1.48e-17,40;UBERON:0010314,6.76e-17,92;UBERON:0002780,1.11e-16,39;UBERON:0001890,1.11e-16,39;UBERON:0006240,1.11e-16,39;UBERON:0003528,1.35e-16,29;UBERON:0002791,1.35e-16,29;UBERON:0001893,1.35e-16,29;UBERON:0000956,1.27e-09,21;UBERON:0001869,1.27e-09,21;UBERON:0000203,1.27e-09,21;UBERON:0002420,7.53e-09,8;UBERON:0007245,7.53e-09,8;UBERON:0010009,7.53e-09,8;UBERON:0010011,7.53e-09,8;UBERON:0000454,7.53e-09,8;UBERON:0002619,2.70e-07,17;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12;UBERON:0002240,3.09e-07,6;UBERON:0005174,3.09e-07,6;UBERON:0001137,3.09e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.629484089877886,0.506884656097573,1.10128051297009,0.782391344348039,0.218025156380447,0.878744730937887,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0.336093799142464,1.28629718017973,0,0.515672092277442,7.48570905180512,12.6957835025288,8.87363964908651,1.69422266034566,0.889294796111139,0,0,0,0.299600110518405,2.30530983192933,2.28117147078651,2.70011876663381,3.15487442027073,10.5690864229407,12.1477697523387,2.32732518508413,2.68367318851062,5.51531271966013,2.20231761998777,2.17068474744819,4.14737639791857,12.3973110466382,12.6252948171325,8.85552729946492,4.18774498502071,5.6276261003168,5.04234217663473,11.7851434189467,9.681274294339,15.8439528951505,0.151452386666368,1.20914496170857,0.579728977403356,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.346970653532272,1.82679286987285,1.38369298353635,1.80867168663147,1.17588707135705,0.125666591329675,1.23597483867187,0.289198713839823,0,0.161766849947409,0,0,0,2.63502717310392,1.46612694769419,0,0.11981512450592,0,0,6.44099749440738,3.66000482254901,8.04187853522332,2.25971616249959,4.09144731728529,2.90903262383384,3.56930778749067,0.611036183101898,0,0.252722758433675,0.631325567659422,0.650602214813519,0.459804208866946,2.16074555766419,2.26057226753573,2.51735046859913,1.5373646434182,2.06143794031403,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.876782929710299,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0,0,0.219550115291051,0.134206418760372,2.52347938276953,8.12946437796347,0.330418782983798,0.264450566663544,1.91959425481711,0.696710015581316,1.15980715189884,1.00841762311671,0.889512175379481,0.380451252225118,0.474529061544512,0.823494773620054,0.754005626400808,0.596869416123452,0.19496408711912,1.79763881730844,0.216138049874694,0.398282546508734,0.758671603812327,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0,0.234690248288502,0.335012514883631,0.476087281772027,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0,2.88991061978026,3.98519734413491,0.491804836130026,0,2.52406575533005,1.56175497718655,2.36965737506079,1.67278158566786,0.445597348164788,1.98153571552183,0.809621403349789,2.04579100537918,1.97643888973262,1.60660658210904,0,0.35613120733451,0.651547837414304,1.48473110675282,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0.643011105094777,1.41872186913819,0.891844088010353,2.46823530903181,3.34911444026059,0.23467170806371,0.21183207086382,0.882113592219848,0.32977250588296,0,0.180938774784468,0,0,0.291480836629851,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,0.790839983952838,1.62655573701479,1.40406943068342,1.25452977608681,0.87345025498471,0.674321731924103,0.578574190077352,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.330916980914195,1.16670713006429,0.387479470433193,0.844780627453891,1.05621514781179,0.651021924219751,0.629156066554265,0.483168241652012,0.288030006257865,0.316011120628178,0,0.205421914329655,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.577271049841977,0.467507608726276,0.226730383615211,1.77588762699252,2.78112955489375,1.17519231454855,0.386379188064381,0.187682475451182,0.915758121336325,0.214368379079066,0,3.3885110557024,4.14292712856459,2.86447756719698,4.98374228796694,3.42541259885321,2.2661816921691,3.37511250115903,0.900642406448441,0,3.10656187051092,0.62272408550506,3.99024873401031,1.02440163452481,0.972426868273176,1.04806581313991,0.919217542250071,3.11145418922261,2.06035057238894,1.28367683836726,1.51618327058278,1.52087579934144,2.45214243801899,1.77918864192777,1.98477972455095,2.75690250986944,5.23923060411381,1.15884325944855,1.92909220463705,1.23625770240992,2.64958056241915,0.342869252385415,2.12970967391205,0.715308569841963,1.0174249164263,1.41164070622996,2.03075058940024,2.92684756596436,1.05227884575137,2.17286582153379,3.36685362994643,1.42362021749009,2.65962102414021,0.818462086339379,1.70430525304563,1.15743966588685,4.49659040288303,3.04111090979031,0.429742108096597,0.765153328275374,0.441182838239031,0.463735671240843 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| ||
|short_description=p4@Gabbr1 | |||
}} | }} |
Latest revision as of 11:30, 26 September 2015
Short description: | p4@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000172789, uc008cmc.1_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.87e-21 | 23 |
neuroblast (sensu Vertebrata) | 6.87e-21 | 23 |
neuron | 1.05e-20 | 33 |
neuronal stem cell | 1.05e-20 | 33 |
neuroblast | 1.05e-20 | 33 |
electrically signaling cell | 1.05e-20 | 33 |
electrically responsive cell | 1.08e-17 | 39 |
electrically active cell | 1.08e-17 | 39 |
neural cell | 3.22e-16 | 43 |
ectodermal cell | 1.43e-15 | 44 |
neurectodermal cell | 1.43e-15 | 44 |