FFCP PHASE1:Mm9::chr17:56723930..56723991,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56723930..56723991,-
|short_description=p1@Safb2
|description=CAGE_peak_1_at_Safb2_5end
|association_with_transcript=0bp_to_ENSMUST00000133604,ENSMUST0000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224902 | |EntrezGene=224902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=814 | |||
|TSSclassifier=NA | |||
|UniProt=D6RJ78,D6RHP9 | |UniProt=D6RJ78,D6RHP9 | ||
|association_with_transcript=0bp_to_ENSMUST00000133604,ENSMUST00000144255,ENSMUST00000146070,ENSMUST00000155983_5end | |||
|cluster_id=chr17:56723930..56723991,- | |||
|description=CAGE_peak_1_at_Safb2_5end | |||
|id=chr17:56723930..56723991,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.84e-11!29;UBERON:0002370!3.93e-10!23;UBERON:0000974!3.93e-10!23;UBERON:0004807!3.93e-10!23;UBERON:0005058!3.93e-10!23;UBERON:0003351!3.93e-10!23;UBERON:0009113!3.93e-10!23;UBERON:0003295!3.93e-10!23;UBERON:0009722!3.93e-10!23;UBERON:0005562!3.93e-10!23;UBERON:0007690!3.93e-10!23;UBERON:0003408!6.12e-10!24;UBERON:0006562!4.49e-09!24;UBERON:0001557!4.49e-09!24;UBERON:0001042!4.49e-09!24;UBERON:0008814!4.49e-09!24;UBERON:0009145!4.49e-09!24;UBERON:0002390!3.40e-08!45;UBERON:0003061!3.40e-08!45;UBERON:0002193!1.23e-07!48;UBERON:0005911!1.43e-07!69;UBERON:0000065!5.33e-07!41;UBERON:0001004!5.67e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.84e-11,29;UBERON:0005057,2.84e-11,29;UBERON:0000077,1.65e-10,35;UBERON:0002370,3.93e-10,23;UBERON:0000974,3.93e-10,23;UBERON:0004807,3.93e-10,23;UBERON:0005058,3.93e-10,23;UBERON:0003351,3.93e-10,23;UBERON:0009113,3.93e-10,23;UBERON:0003295,3.93e-10,23;UBERON:0009722,3.93e-10,23;UBERON:0005562,3.93e-10,23;UBERON:0007690,3.93e-10,23;UBERON:0003408,6.12e-10,24;UBERON:0006562,4.49e-09,24;UBERON:0001557,4.49e-09,24;UBERON:0001042,4.49e-09,24;UBERON:0008814,4.49e-09,24;UBERON:0009145,4.49e-09,24;UBERON:0002390,3.40e-08,45;UBERON:0003061,3.40e-08,45;UBERON:0002193,1.23e-07,48;UBERON:0002405,1.23e-07,48;UBERON:0005911,1.43e-07,69;UBERON:0000065,5.33e-07,41;UBERON:0001004,5.67e-07,42 | |||
|phase1_expression=36.3537882927882,60.7217209292488,46.8649216571222,119.170899254891,93.1666057700206,63.2904855107825,58.8703854300725,71.5343211866332,88.5561062333984,107.903746634439,70.8842388453591,73.1510697987235,92.9619963526447,86.2839371875504,81.6118916448374,93.9485240688792,79.7500541066087,82.9665494892165,96.5285612584401,108.643750860296,47.8793723550523,39.2199257243497,34.4783721663395,34.5583633233758,28.2173415712619,32.1569899904411,35.3224836850441,36.4146383239152,21.852693237483,35.5362482961502,22.8382425974964,67.9482820601805,67.6571266343027,47.5445043046316,52.2821431749807,24.7689621584154,53.6965406970031,42.6902263351646,28.9094077473806,42.9289470058515,65.8819266594736,46.4470929771743,59.7177734228319,32.4813790376989,25.5469866673177,28.816840089384,21.9069576417451,17.4420125104357,14.9386604259441,14.387812531497,18.8981669194239,23.0004102983955,103.186302725508,108.07895915969,109.566578520443,29.5848351441339,28.9398774338144,33.0030139057563,19.4223802425214,25.9205579843296,19.6487735086916,15.9256930072492,16.0073063300005,16.1981949110652,27.6882581518753,23.4458437932213,14.3808053048834,20.3635701820424,28.4109537725229,35.5065617812346,27.552569937031,18.2816630018434,22.7494597180162,22.5383070555515,33.0666875012915,32.1726575313507,34.1359231098105,33.1987079021488,27.8027825193801,25.0583946687368,28.0867065859398,25.0038417867245,27.3599339021353,29.2636557216474,33.1572197675678,25.3380583507354,28.6167078406197,25.7231235238915,22.1120484532897,22.898182712356,92.7566363845369,59.3692475117157,22.4390540123558,33.4615978815447,36.3874793770695,50.6270382419989,33.5662164114887,26.0758393544428,24.1600984280668,27.5604868118065,26.7602497575693,60.3134443847294,407.688383530633,419.529354860465,22.9480503471887,27.3628654713106,23.7596489156948,38.3657835856041,113.414793037461,41.5637989381509,35.0440360067594,46.5832181817576,31.1330921295679,40.8458355897607,45.3892409543821,35.3123121636388,38.5624149665623,44.8258006451726,51.3074120130927,32.3533699894818,44.1683036920787,56.730404616821,29.8226817948995,70.8529528767944,61.9962252167827,32.1875889562825,47.8062346778622,41.9931911695385,41.170753571673,41.4920071151359,54.9000723382352,29.1518096901845,38.0675261221085,44.4944895754775,46.1289458922223,42.182728397617,37.5787252607667,49.1407533909867,32.0957903210767,45.2449990155919,47.3638412384242,29.4274693674845,45.1955945811427,51.6917525176503,48.4419873957454,51.7579429950793,46.0075467588269,56.3973348211054,40.0956466855087,62.5941125355482,41.8763675510198,34.6329257235568,59.5021113342779,52.237824978325,55.1496125573288,59.710280045548,49.1549231119264,52.2416251442872,32.110475431702,32.5187462880738,38.2277477769187,33.6716054932098,44.2712655544343,38.5657894224912,41.9606547053669,45.8091871158303,41.8506506183406,33.745183944112,34.5575684818309,35.2960047770055,41.4261616779323,39.0353966425637,36.8844193688965,38.6514486029871,39.3242203814918,32.7236667366125,49.5628174475697,39.9320355661952,45.2171091134696,54.3433812153426,55.0264059845339,42.5552236955253,42.2518283305254,29.8654232996718,43.1821446005506,29.3164139408739,41.4703094520445,39.7912944082302,46.0115245601123,46.7386092500195,41.4985055759413,49.9844595868462,34.1402221715547,52.4400672878655,52.9726357663478,52.5420425840911,57.022031227282,46.8507276867328,51.0318854592756,52.9920431246772,44.1166425234263,40.227475438507,31.7204310983249,47.0503198119385,43.8326559102443,46.096733038895,45.2378070696361,37.3824597616246,35.6476192493988,48.9083433666378,45.0735930434598,31.0254396902532,113.57688315661,39.0747995051929,41.188972851122,40.1600415935908,34.4443033962071,44.8672474867931,38.6134167448204,37.140316707015,51.8228625085642,60.0897603644166,63.6010572861841,58.2921775897519,53.0837319175811,47.4174764294451,54.5417598607421,51.158343308867,50.5471616644234,59.3185199270972,44.5527253214011,50.337872386366,43.729472342389,32.6343410291226,51.6352486669988,52.1520450515944,36.6055345172166,40.6724552474945,20.4918681720844,32.8212205365685,41.0160685241134,42.167384384037,54.0712728309325,50.4224163679885,60.8240380244936,62.8429898351208,48.1724734993124,51.4370309923909,67.5942100288555,64.2642632843614,48.1176888856031,46.6531881608209,44.7939138222334,48.666186276898,74.3372774703792,54.6256431348708,52.9066224688314,57.7131544053048,59.6509823619161,44.5780964518695,59.9553640150273,61.8007340111759,55.9700884064012,73.9526013569809,74.8472120882491,68.0694585438033,54.4703369206061,50.2370452347355,48.5095064185329,36.6516329904023,48.2365435506984,42.4517785892928,45.2509806655833,44.1474176216169,36.1394430418114,36.0114520468494,71.8922577659176,101.075273053127,49.7310434223389,44.5712515219072,46.9133311932326,59.4190057077122,50.1347039003343,38.197612214165,57.4126159480785,47.6753664995044,51.2988840814101,60.8430116125152,78.5991809395895,56.9657651284241,52.1833780081136,53.8813091446083,54.1743897313341,48.6882015187708,39.0674952072702,50.6265473145853,43.8501683736513,44.3267187550674,44.3276004404741,42.6171334576033,40.4175398496893,29.3166655022113,37.5883422546199,47.8431271076933,26.4935681181569,55.0220889441842,44.6737924234164,50.1684065927643,41.5894631598294,53.2211795295951,66.6589115507882,55.7274767132106,73.0869630647205,50.7326653734613,36.8678408010068,83.1109247252109,36.2878135369394,44.2684225380405,52.0982500140958,60.6900498312762,60.7964945630671,62.8622200989437,62.0296014133224,78.1480322598663,63.5564767502699,70.8808081511989,83.5214037939678,85.8209627431739,84.7357540816375,28.7947587191318,36.8496682600947,47.9969132860695,40.4601925437429,45.2063650035326,44.1053817310278,46.3373609396181,47.5897801555526,47.1477777793242,46.3096510945995,48.3341498332536,41.821372481076,32.480251462957,37.6795385873853,45.323633843382,41.851395014372,47.7340475417674,51.2050922152151,46.5984280576638,39.8543414723238,48.2820096815248,41.6589998040087,49.3506635648637,33.3284928578492,40.8132588759031,54.4504483113957,57.6898160268904,52.3098311634659,52.5610200468699,61.341990573438,65.6419668023545,57.0276780491584,52.3085495147782,51.3473092463183,50.0108375847227,54.0020958903027,51.1209434228818,56.455768410053,67.7115032618228,74.7454970200206,56.4373063586693,60.5627922466195,61.7722270687396,65.5001287690701,57.9610064057984,60.3662310480149,64.7151490137094,62.0624800275588,66.2147880556131,54.2162032827476,46.7896291283926,51.9723424825506,57.3266312388074,42.24654780487,33.4746174436848,37.8969205681562,34.1644975936794,41.3182797268702,29.3386587428956,31.5340256443773 | |phase1_expression=36.3537882927882,60.7217209292488,46.8649216571222,119.170899254891,93.1666057700206,63.2904855107825,58.8703854300725,71.5343211866332,88.5561062333984,107.903746634439,70.8842388453591,73.1510697987235,92.9619963526447,86.2839371875504,81.6118916448374,93.9485240688792,79.7500541066087,82.9665494892165,96.5285612584401,108.643750860296,47.8793723550523,39.2199257243497,34.4783721663395,34.5583633233758,28.2173415712619,32.1569899904411,35.3224836850441,36.4146383239152,21.852693237483,35.5362482961502,22.8382425974964,67.9482820601805,67.6571266343027,47.5445043046316,52.2821431749807,24.7689621584154,53.6965406970031,42.6902263351646,28.9094077473806,42.9289470058515,65.8819266594736,46.4470929771743,59.7177734228319,32.4813790376989,25.5469866673177,28.816840089384,21.9069576417451,17.4420125104357,14.9386604259441,14.387812531497,18.8981669194239,23.0004102983955,103.186302725508,108.07895915969,109.566578520443,29.5848351441339,28.9398774338144,33.0030139057563,19.4223802425214,25.9205579843296,19.6487735086916,15.9256930072492,16.0073063300005,16.1981949110652,27.6882581518753,23.4458437932213,14.3808053048834,20.3635701820424,28.4109537725229,35.5065617812346,27.552569937031,18.2816630018434,22.7494597180162,22.5383070555515,33.0666875012915,32.1726575313507,34.1359231098105,33.1987079021488,27.8027825193801,25.0583946687368,28.0867065859398,25.0038417867245,27.3599339021353,29.2636557216474,33.1572197675678,25.3380583507354,28.6167078406197,25.7231235238915,22.1120484532897,22.898182712356,92.7566363845369,59.3692475117157,22.4390540123558,33.4615978815447,36.3874793770695,50.6270382419989,33.5662164114887,26.0758393544428,24.1600984280668,27.5604868118065,26.7602497575693,60.3134443847294,407.688383530633,419.529354860465,22.9480503471887,27.3628654713106,23.7596489156948,38.3657835856041,113.414793037461,41.5637989381509,35.0440360067594,46.5832181817576,31.1330921295679,40.8458355897607,45.3892409543821,35.3123121636388,38.5624149665623,44.8258006451726,51.3074120130927,32.3533699894818,44.1683036920787,56.730404616821,29.8226817948995,70.8529528767944,61.9962252167827,32.1875889562825,47.8062346778622,41.9931911695385,41.170753571673,41.4920071151359,54.9000723382352,29.1518096901845,38.0675261221085,44.4944895754775,46.1289458922223,42.182728397617,37.5787252607667,49.1407533909867,32.0957903210767,45.2449990155919,47.3638412384242,29.4274693674845,45.1955945811427,51.6917525176503,48.4419873957454,51.7579429950793,46.0075467588269,56.3973348211054,40.0956466855087,62.5941125355482,41.8763675510198,34.6329257235568,59.5021113342779,52.237824978325,55.1496125573288,59.710280045548,49.1549231119264,52.2416251442872,32.110475431702,32.5187462880738,38.2277477769187,33.6716054932098,44.2712655544343,38.5657894224912,41.9606547053669,45.8091871158303,41.8506506183406,33.745183944112,34.5575684818309,35.2960047770055,41.4261616779323,39.0353966425637,36.8844193688965,38.6514486029871,39.3242203814918,32.7236667366125,49.5628174475697,39.9320355661952,45.2171091134696,54.3433812153426,55.0264059845339,42.5552236955253,42.2518283305254,29.8654232996718,43.1821446005506,29.3164139408739,41.4703094520445,39.7912944082302,46.0115245601123,46.7386092500195,41.4985055759413,49.9844595868462,34.1402221715547,52.4400672878655,52.9726357663478,52.5420425840911,57.022031227282,46.8507276867328,51.0318854592756,52.9920431246772,44.1166425234263,40.227475438507,31.7204310983249,47.0503198119385,43.8326559102443,46.096733038895,45.2378070696361,37.3824597616246,35.6476192493988,48.9083433666378,45.0735930434598,31.0254396902532,113.57688315661,39.0747995051929,41.188972851122,40.1600415935908,34.4443033962071,44.8672474867931,38.6134167448204,37.140316707015,51.8228625085642,60.0897603644166,63.6010572861841,58.2921775897519,53.0837319175811,47.4174764294451,54.5417598607421,51.158343308867,50.5471616644234,59.3185199270972,44.5527253214011,50.337872386366,43.729472342389,32.6343410291226,51.6352486669988,52.1520450515944,36.6055345172166,40.6724552474945,20.4918681720844,32.8212205365685,41.0160685241134,42.167384384037,54.0712728309325,50.4224163679885,60.8240380244936,62.8429898351208,48.1724734993124,51.4370309923909,67.5942100288555,64.2642632843614,48.1176888856031,46.6531881608209,44.7939138222334,48.666186276898,74.3372774703792,54.6256431348708,52.9066224688314,57.7131544053048,59.6509823619161,44.5780964518695,59.9553640150273,61.8007340111759,55.9700884064012,73.9526013569809,74.8472120882491,68.0694585438033,54.4703369206061,50.2370452347355,48.5095064185329,36.6516329904023,48.2365435506984,42.4517785892928,45.2509806655833,44.1474176216169,36.1394430418114,36.0114520468494,71.8922577659176,101.075273053127,49.7310434223389,44.5712515219072,46.9133311932326,59.4190057077122,50.1347039003343,38.197612214165,57.4126159480785,47.6753664995044,51.2988840814101,60.8430116125152,78.5991809395895,56.9657651284241,52.1833780081136,53.8813091446083,54.1743897313341,48.6882015187708,39.0674952072702,50.6265473145853,43.8501683736513,44.3267187550674,44.3276004404741,42.6171334576033,40.4175398496893,29.3166655022113,37.5883422546199,47.8431271076933,26.4935681181569,55.0220889441842,44.6737924234164,50.1684065927643,41.5894631598294,53.2211795295951,66.6589115507882,55.7274767132106,73.0869630647205,50.7326653734613,36.8678408010068,83.1109247252109,36.2878135369394,44.2684225380405,52.0982500140958,60.6900498312762,60.7964945630671,62.8622200989437,62.0296014133224,78.1480322598663,63.5564767502699,70.8808081511989,83.5214037939678,85.8209627431739,84.7357540816375,28.7947587191318,36.8496682600947,47.9969132860695,40.4601925437429,45.2063650035326,44.1053817310278,46.3373609396181,47.5897801555526,47.1477777793242,46.3096510945995,48.3341498332536,41.821372481076,32.480251462957,37.6795385873853,45.323633843382,41.851395014372,47.7340475417674,51.2050922152151,46.5984280576638,39.8543414723238,48.2820096815248,41.6589998040087,49.3506635648637,33.3284928578492,40.8132588759031,54.4504483113957,57.6898160268904,52.3098311634659,52.5610200468699,61.341990573438,65.6419668023545,57.0276780491584,52.3085495147782,51.3473092463183,50.0108375847227,54.0020958903027,51.1209434228818,56.455768410053,67.7115032618228,74.7454970200206,56.4373063586693,60.5627922466195,61.7722270687396,65.5001287690701,57.9610064057984,60.3662310480149,64.7151490137094,62.0624800275588,66.2147880556131,54.2162032827476,46.7896291283926,51.9723424825506,57.3266312388074,42.24654780487,33.4746174436848,37.8969205681562,34.1644975936794,41.3182797268702,29.3386587428956,31.5340256443773 | ||
|short_description=p1@Safb2 | |||
}} | }} |
Latest revision as of 17:15, 26 September 2015
Short description: | p1@Safb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Safb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:814 |
Association with transcript: | 0bp_to_ENSMUST00000133604, ENSMUST00000144255, ENSMUST00000146070, ENSMUST00000155983_5end |
EntrezGene: | Safb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.84e-11 | 29 |
immune organ | 2.84e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 1.65e-10 | 35 |
thymus | 3.93e-10 | 23 |
neck | 3.93e-10 | 23 |
respiratory system epithelium | 3.93e-10 | 23 |
hemolymphoid system gland | 3.93e-10 | 23 |
pharyngeal epithelium | 3.93e-10 | 23 |
thymic region | 3.93e-10 | 23 |
pharyngeal gland | 3.93e-10 | 23 |
entire pharyngeal arch endoderm | 3.93e-10 | 23 |
thymus primordium | 3.93e-10 | 23 |
early pharyngeal endoderm | 3.93e-10 | 23 |
gland of gut | 6.12e-10 | 24 |
pharynx | 4.49e-09 | 24 |
upper respiratory tract | 4.49e-09 | 24 |
chordate pharynx | 4.49e-09 | 24 |
pharyngeal arch system | 4.49e-09 | 24 |
pharyngeal region of foregut | 4.49e-09 | 24 |
hematopoietic system | 3.40e-08 | 45 |
blood island | 3.40e-08 | 45 |
hemolymphoid system | 1.23e-07 | 48 |
immune system | 1.23e-07 | 48 |
endo-epithelium | 1.43e-07 | 69 |
respiratory tract | 5.33e-07 | 41 |
respiratory system | 5.67e-07 | 42 |