FFCP PHASE1:Hg19::chr18:52989222..52989233,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11634 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=G0LNU9,P15884,G0LNV0 | ||
|association_with_transcript=-132bp_to_NM_001243234,NM_001243235_5end | |association_with_transcript=-132bp_to_NM_001243234,NM_001243235_5end | ||
|cluster_id=chr18:52989222..52989233,- | |cluster_id=chr18:52989222..52989233,- | ||
Latest revision as of 20:39, 19 September 2015
| Short description: | p61@TCF4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_61_at_TCF4_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | -132bp_to_NM_001243234, NM_001243235_5end |
| EntrezGene: | TCF4 |
| HGNC: | 11634 |
| UniProt: | G0LNU9P15884G0LNV0 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p61@TCF4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 9.88e-31 | 8 |
| neuron | 2.30e-23 | 6 |
| neuroblast | 2.30e-23 | 6 |
| electrically signaling cell | 2.30e-23 | 6 |
| neural cell | 2.36e-09 | 25 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 3.70e-14 | 81 |
| occipital lobe | 3.03e-13 | 5 |
| nervous system | 1.07e-12 | 89 |
| neocortex | 4.52e-12 | 20 |
| regional part of cerebral cortex | 4.78e-11 | 22 |
| cerebral cortex | 8.37e-10 | 25 |
| pallium | 8.37e-10 | 25 |
| regional part of telencephalon | 8.94e-08 | 32 |
| cerebral hemisphere | 8.94e-08 | 32 |
| brain grey matter | 2.42e-07 | 34 |
Showing 1 to 10 of 13 entries
