FFCP PHASE1:Hg19::chr19:3136220..3136277,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4383 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P30679,E9KL47 | ||
|association_with_transcript=29bp_to_ENST00000262958,NM_002068,uc002lxf.2,uc010xhf.1_5end | |association_with_transcript=29bp_to_ENST00000262958,NM_002068,uc002lxf.2,uc010xhf.1_5end | ||
|cluster_id=chr19:3136220..3136277,+ | |cluster_id=chr19:3136220..3136277,+ | ||
Latest revision as of 04:51, 17 September 2015
| Short description: | p1@GNA15 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GNA15_5end |
| Coexpression cluster: | C1188_Urothelial_Gingival_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Prostate |
| Association with transcript: | 29bp_to_ENST00000262958, NM_002068, uc002lxf.2, uc010xhf.1_5end |
| EntrezGene: | GNA15 |
| HGNC: | 4383 |
| UniProt: | P30679E9KL47 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GNA15 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.59e-33 | 168 |
| myeloid cell | 7.76e-31 | 108 |
| common myeloid progenitor | 7.76e-31 | 108 |
| hematopoietic cell | 8.51e-30 | 177 |
| hematopoietic oligopotent progenitor cell | 1.52e-29 | 161 |
| hematopoietic multipotent progenitor cell | 1.52e-29 | 161 |
| leukocyte | 1.16e-26 | 136 |
| myeloid leukocyte | 1.41e-22 | 72 |
| granulocyte monocyte progenitor cell | 2.88e-20 | 67 |
| defensive cell | 2.52e-19 | 48 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 9.54e-18 | 76 |
| immune system | 5.71e-16 | 93 |
| hematopoietic system | 6.56e-16 | 98 |
| blood island | 6.56e-16 | 98 |
| bone element | 4.25e-15 | 82 |
| skeletal element | 6.05e-15 | 90 |
| hemolymphoid system | 6.84e-14 | 108 |
| skeletal system | 1.27e-11 | 100 |
| respiratory system | 2.00e-07 | 74 |
| extraembryonic membrane | 9.41e-07 | 14 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 9.40e-08 | 14 |
Showing 1 to 1 of 1 entries
