FFCP PHASE1:Mm9::chr19:4201591..4201623,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:4201591..4201623,-
|short_description=p1@Rad9
|description=CAGE_peak_1_at_Rad9_5end
|association_with_transcript=0bp_to_ENSMUST00000025740,NM_011237,uc008...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19367 | |EntrezGene=19367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0F6 | |UniProt=Q9Z0F6 | ||
|association_with_transcript=0bp_to_ENSMUST00000025740,NM_011237,uc008fzh.1_5end | |||
|cluster_id=chr19:4201591..4201623,- | |||
|description=CAGE_peak_1_at_Rad9_5end | |||
|id=chr19:4201591..4201623,- | |||
|ontology_enrichment_celltype=CL:0000988!6.92e-08!32;CL:0002032!6.92e-08!32;CL:0000037!6.92e-08!32;CL:0000566!6.92e-08!32;CL:0000837!6.92e-08!32;CL:0000219!9.01e-08!54;CL:0002031!1.50e-07!25;CL:0000763!1.82e-07!16;CL:0000839!3.73e-07!13;CL:0002320!5.94e-07!46;CL:0000134!5.94e-07!46;CL:0000049!8.00e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.92e-08,32;CL:0002032,6.92e-08,32;CL:0000037,6.92e-08,32;CL:0000837,6.92e-08,32;CL:0000219,9.01e-08,54;CL:0002031,1.50e-07,25;CL:0000763,1.82e-07,16;CL:0000839,3.73e-07,13;CL:0002320,5.94e-07,46;CL:0000134,5.94e-07,46;CL:0000049,8.00e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-12!45;UBERON:0003061!2.78e-12!45;UBERON:0002193!2.18e-11!48;UBERON:0003081!1.65e-09!88;UBERON:0002204!2.43e-08!32;UBERON:0002371!1.45e-07!16;UBERON:0001474!2.29e-07!22;UBERON:0004765!2.29e-07!22;UBERON:0001434!2.29e-07!22;UBERON:0002405!5.86e-07!70;UBERON:0002384!5.94e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-12,45;UBERON:0003061,2.75e-12,45;UBERON:0002193,2.16e-11,48;UBERON:0002405,2.16e-11,48;UBERON:0003081,5.00e-09,87;UBERON:0002204,2.43e-08,32;UBERON:0002371,1.45e-07,16;UBERON:0001474,2.29e-07,22;UBERON:0004765,2.29e-07,22;UBERON:0001434,2.29e-07,22;UBERON:0002384,5.94e-07,46 | |||
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| ||
|short_description=p1@Rad9 | |||
}} | }} |
Latest revision as of 18:55, 25 September 2015
Short description: | p1@Rad9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rad9_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000025740, NM_011237, uc008fzh.1_5end |
EntrezGene: | Rad9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.92e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.92e-08 | 32 |
hematopoietic stem cell | 6.92e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.92e-08 | 32 |
motile cell | 9.01e-08 | 54 |
hematopoietic lineage restricted progenitor cell | 1.50e-07 | 25 |
myeloid cell | 1.82e-07 | 16 |
myeloid lineage restricted progenitor cell | 3.73e-07 | 13 |
connective tissue cell | 5.94e-07 | 46 |
mesenchymal cell | 5.94e-07 | 46 |
common myeloid progenitor | 8.00e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-12 | 45 |
blood island | 2.75e-12 | 45 |
hemolymphoid system | 2.16e-11 | 48 |
immune system | 2.16e-11 | 48 |
lateral plate mesoderm | 5.00e-09 | 87 |
musculoskeletal system | 2.43e-08 | 32 |
bone marrow | 1.45e-07 | 16 |
bone element | 2.29e-07 | 22 |
skeletal element | 2.29e-07 | 22 |
skeletal system | 2.29e-07 | 22 |
connective tissue | 5.94e-07 | 46 |