Personal tools

FFCP PHASE1:Mm9::chr19:5894070..5894097,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr19:5894070..5894097,- |short_description=p2@Tigd3 |description=CAGE_peak_2_at_Tigd3_5end |association_with_transcript=9bp_to_ENSMUST00000055911,NM_198634,uc0...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:5894070..5894097,-
|DHSsupport=NA
|short_description=p2@Tigd3
|DPIdataset=NA
|description=CAGE_peak_2_at_Tigd3_5end
|association_with_transcript=9bp_to_ENSMUST00000055911,NM_198634,uc008gft.1,uc008gfu.1_5end
|EntrezGene=332359
|EntrezGene=332359
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q7TM95
|UniProt=Q7TM95
|association_with_transcript=9bp_to_ENSMUST00000055911,NM_198634,uc008gft.1,uc008gfu.1_5end
|cluster_id=chr19:5894070..5894097,-
|description=CAGE_peak_2_at_Tigd3_5end
|id=chr19:5894070..5894097,-
|ontology_enrichment_celltype=CL:0000117!5.05e-09!23;CL:0000337!5.05e-09!23;CL:0000540!3.21e-07!33;CL:0000047!3.21e-07!33;CL:0000031!3.21e-07!33;CL:0000404!3.21e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-10,23;CL:0000337,2.41e-10,23;CL:0000540,1.40e-07,33;CL:0000047,1.40e-07,33;CL:0000031,1.40e-07,33;CL:0000404,1.40e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.54e-11!71;UBERON:0003075!2.54e-11!71;UBERON:0007284!2.54e-11!71;UBERON:0001049!9.91e-11!52;UBERON:0005068!9.91e-11!52;UBERON:0006241!9.91e-11!52;UBERON:0007135!9.91e-11!52;UBERON:0002020!2.79e-10!34;UBERON:0001017!7.92e-10!73;UBERON:0005743!7.92e-10!73;UBERON:0003056!3.39e-09!49;UBERON:0000073!3.63e-09!75;UBERON:0001016!3.63e-09!75;UBERON:0004121!1.56e-08!102;UBERON:0000924!1.56e-08!102;UBERON:0006601!1.56e-08!102;UBERON:0000153!4.65e-08!94;UBERON:0000955!5.46e-08!50;UBERON:0006238!5.46e-08!50;UBERON:0003080!6.11e-08!40;UBERON:0002791!6.18e-08!29;UBERON:0003528!6.18e-08!29;UBERON:0001893!6.18e-08!29;UBERON:0002616!7.44e-08!49;UBERON:0002780!1.33e-07!39;UBERON:0001890!1.33e-07!39;UBERON:0006240!1.33e-07!39;UBERON:0000033!1.58e-07!63;UBERON:0007811!6.51e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.33e-11,64;UBERON:0003075,2.33e-11,64;UBERON:0007284,2.33e-11,64;UBERON:0002020,2.71e-11,34;UBERON:0001049,9.04e-10,52;UBERON:0005068,9.04e-10,52;UBERON:0006241,9.04e-10,52;UBERON:0007135,9.04e-10,52;UBERON:0003056,1.55e-09,49;UBERON:0000073,4.86e-09,54;UBERON:0010371,1.72e-08,73;UBERON:0003528,4.56e-08,29;UBERON:0002791,4.56e-08,29;UBERON:0001893,4.56e-08,29;UBERON:0001017,5.65e-08,73;UBERON:0003080,1.34e-07,40;UBERON:0001016,1.80e-07,75;UBERON:0002616,2.25e-07,46;UBERON:0002780,3.71e-07,39;UBERON:0001890,3.71e-07,39;UBERON:0006240,3.71e-07,39;UBERON:0000955,4.73e-07,47;UBERON:0006238,4.73e-07,47;UBERON:0004121,7.99e-07,95;UBERON:0000924,7.99e-07,95;UBERON:0006601,7.99e-07,95
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0.234064526321993,0,0,0,0.0874204024189974,1.99865857089398,0.404950534779652,1.39912375625629,0,0,0,0.680346321208558,0.297872853602656,0.783599367416806,0.47997726838022,0,0,0,0,0,0.252030129759931,0,3.17515336729816,1.84519436275371,0,0.288851619751275,0.664938581433969,0,0,0.7813353445238,0,0,0,0,0,0.304130793658544,0,0.782391344348039,0.65407546914134,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,5.26022798234954,7.93486468908049,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,2.7996195323289,2.97013064329719,3.78584930432488,1.99955689082663,1.76694832761291,4.89963196859816,4.02550978276593,0.919218786610021,0,0.383062014255563,0.768032666281217,5.40733779693795,5.94669683415663,5.2091337055676,0.837548997004143,1.12552522006336,0.763991238884051,3.24091444021034,1.13897344639282,4.28718725398191,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,0.823120949949934,0.251333182659351,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,2.63502717310392,2.09446706813455,0,0.11981512450592,0,0.635351135365324,1.3481157546434,0.915001205637253,6.40837195775608,1.04294592115366,1.02286182932132,0,1.1356888414743,1.12023300235348,0.373220911830279,0,0.210441855886474,1.30120442962704,1.37941262660084,0.720248519221397,1.65775299619287,2.4493139694478,2.43416068541215,1.21812241927647,0,2.15567992932842,1.51284864134255,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.946978942340841,1.18058539048442,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.985004784474571,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.630869845692382,2.26390147234426,0.991256348951394,0.264450566663544,1.2797295032114,0.928946687441754,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.995706366271836,1.13800740571849,0.913988100877831,1.1270773567308,1.01825663922657,0.581857461502877,0.420814919341911,0.758838445491087,0,0,0.123397163921801,0,1.16791574001266,1.76903095601883,0,1.42002084971952,0.72353147925725,0.25462585178142,0,0.648540907100142,0,0,0.744281895337007,0,0.252578877947112,0,0,0.184753190166605,1.32643988239339,0.814824882210129,1.86719594352707,0.704070744865506,1.34005005953453,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,0.321101179975584,0.937693492737625,0.163934945376675,0.252470927204373,0,0.390438744296638,1.07711698866399,0.716906393857656,0.222798674082394,0.849229592366497,1.21443210502468,0.876767573733936,1.18586333383957,0.963963949265421,0.141940085208269,0.712262414669021,0.651547837414304,0,0,0.728341908464944,0.604647113929502,0.188605079755898,1.77181135728464,1.22974059177571,0.258428293168221,1.45413491791002,0.356497378384721,0,0,0,0.340439605753788,1.08036656418786,1.4229455216103,1.50035924522115,0.177340233642274,0.891844088010353,0.493647061806363,0.913394847343798,0,0.21183207086382,0,0.49465875882444,0.645857706783622,0.603129249281559,0.358117032009409,0.984845398470368,0.291480836629851,0.556275906031529,1.02522528478712,1.65109494370578,0.925972636848558,3.01389531207506,2.32380187125743,1.37266903923914,0.339956859987711,0.559805809294632,0.138199973804424,0,1.10717597753397,0,0.648032044930808,1.04544148007234,0.87345025498471,1.07891477107857,0.330613822901344,0.26175594198403,0,0,0,0.448549638131936,0.66183396182839,1.16670713006429,1.16243841129958,1.01373675294467,1.40828686374905,0.911430693907651,0.734015410979976,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.616265742988964,1.29920822977795,1.79026695667481,0.596044064343795,1.56254084375959,0.886137163047463,1.11063094942962,1.447929326445,1.31074040677893,0.877120926657772,1.15454209968395,0.818138315270983,0,0.443971906748129,0.448569283047378,0,0,0.187682475451182,0,0,0,2.25900737046827,1.84130094602871,1.14579102687879,1.54667864109319,0,3.0215755895588,0.675022500231806,0.45032120322422,1.81256963593682,1.03552062350364,1.97195960409936,1.59609949360412,2.39027048055788,1.45864030240976,2.51535795153579,0.735374033800057,1.33348036680969,1.23621034343337,1.28367683836726,0.505394423527595,0,1.13175804831646,0.468207537349412,1.02440243847791,0.861532034334199,1.90517476513229,0.927074607558844,1.15745532278223,0,0.588795680537589,1.02860775715625,1.06485483695602,0,0.726732083161643,1.50575008664529,0.761531471025089,1.28049581010941,0.263069711437843,1.62964936615034,0,1.30498519936592,0.985044823755635,0.818462086339379,0.464810523557898,0.964533054905707,2.24829520144151,1.16965804222704,1.07435527024149,0.57386499620653,1.32354851471709,0.463735671240843
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0.234064526321993,0,0,0,0.0874204024189974,1.99865857089398,0.404950534779652,1.39912375625629,0,0,0,0.680346321208558,0.297872853602656,0.783599367416806,0.47997726838022,0,0,0,0,0,0.252030129759931,0,3.17515336729816,1.84519436275371,0,0.288851619751275,0.664938581433969,0,0,0.7813353445238,0,0,0,0,0,0.304130793658544,0,0.782391344348039,0.65407546914134,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,5.26022798234954,7.93486468908049,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0.384218305321555,2.7996195323289,2.97013064329719,3.78584930432488,1.99955689082663,1.76694832761291,4.89963196859816,4.02550978276593,0.919218786610021,0,0.383062014255563,0.768032666281217,5.40733779693795,5.94669683415663,5.2091337055676,0.837548997004143,1.12552522006336,0.763991238884051,3.24091444021034,1.13897344639282,4.28718725398191,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,0.823120949949934,0.251333182659351,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,2.63502717310392,2.09446706813455,0,0.11981512450592,0,0.635351135365324,1.3481157546434,0.915001205637253,6.40837195775608,1.04294592115366,1.02286182932132,0,1.1356888414743,1.12023300235348,0.373220911830279,0,0.210441855886474,1.30120442962704,1.37941262660084,0.720248519221397,1.65775299619287,2.4493139694478,2.43416068541215,1.21812241927647,0,2.15567992932842,1.51284864134255,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.946978942340841,1.18058539048442,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.985004784474571,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.630869845692382,2.26390147234426,0.991256348951394,0.264450566663544,1.2797295032114,0.928946687441754,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.995706366271836,1.13800740571849,0.913988100877831,1.1270773567308,1.01825663922657,0.581857461502877,0.420814919341911,0.758838445491087,0,0,0.123397163921801,0,1.16791574001266,1.76903095601883,0,1.42002084971952,0.72353147925725,0.25462585178142,0,0.648540907100142,0,0,0.744281895337007,0,0.252578877947112,0,0,0.184753190166605,1.32643988239339,0.814824882210129,1.86719594352707,0.704070744865506,1.34005005953453,0.476087281772027,0.195133647857799,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,0.321101179975584,0.937693492737625,0.163934945376675,0.252470927204373,0,0.390438744296638,1.07711698866399,0.716906393857656,0.222798674082394,0.849229592366497,1.21443210502468,0.876767573733936,1.18586333383957,0.963963949265421,0.141940085208269,0.712262414669021,0.651547837414304,0,0,0.728341908464944,0.604647113929502,0.188605079755898,1.77181135728464,1.22974059177571,0.258428293168221,1.45413491791002,0.356497378384721,0,0,0,0.340439605753788,1.08036656418786,1.4229455216103,1.50035924522115,0.177340233642274,0.891844088010353,0.493647061806363,0.913394847343798,0,0.21183207086382,0,0.49465875882444,0.645857706783622,0.603129249281559,0.358117032009409,0.984845398470368,0.291480836629851,0.556275906031529,1.02522528478712,1.65109494370578,0.925972636848558,3.01389531207506,2.32380187125743,1.37266903923914,0.339956859987711,0.559805809294632,0.138199973804424,0,1.10717597753397,0,0.648032044930808,1.04544148007234,0.87345025498471,1.07891477107857,0.330613822901344,0.26175594198403,0,0,0,0.448549638131936,0.66183396182839,1.16670713006429,1.16243841129958,1.01373675294467,1.40828686374905,0.911430693907651,0.734015410979976,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.616265742988964,1.29920822977795,1.79026695667481,0.596044064343795,1.56254084375959,0.886137163047463,1.11063094942962,1.447929326445,1.31074040677893,0.877120926657772,1.15454209968395,0.818138315270983,0,0.443971906748129,0.448569283047378,0,0,0.187682475451182,0,0,0,2.25900737046827,1.84130094602871,1.14579102687879,1.54667864109319,0,3.0215755895588,0.675022500231806,0.45032120322422,1.81256963593682,1.03552062350364,1.97195960409936,1.59609949360412,2.39027048055788,1.45864030240976,2.51535795153579,0.735374033800057,1.33348036680969,1.23621034343337,1.28367683836726,0.505394423527595,0,1.13175804831646,0.468207537349412,1.02440243847791,0.861532034334199,1.90517476513229,0.927074607558844,1.15745532278223,0,0.588795680537589,1.02860775715625,1.06485483695602,0,0.726732083161643,1.50575008664529,0.761531471025089,1.28049581010941,0.263069711437843,1.62964936615034,0,1.30498519936592,0.985044823755635,0.818462086339379,0.464810523557898,0.964533054905707,2.24829520144151,1.16965804222704,1.07435527024149,0.57386499620653,1.32354851471709,0.463735671240843
|short_description=p2@Tigd3
}}
}}

Latest revision as of 01:55, 26 September 2015

Short description:p2@Tigd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tigd3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 9bp_to_ENSMUST00000055911, NM_198634, uc008gft.1, uc008gfu.1_5end
EntrezGene:Tigd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tigd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.41e-1023
neuroblast (sensu Vertebrata)2.41e-1023
neuron1.40e-0733
neuronal stem cell1.40e-0733
neuroblast1.40e-0733
electrically signaling cell1.40e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm2.33e-1164
neural plate2.33e-1164
presumptive neural plate2.33e-1164
gray matter2.71e-1134
neural tube9.04e-1052
neural rod9.04e-1052
future spinal cord9.04e-1052
neural keel9.04e-1052
pre-chordal neural plate1.55e-0949
regional part of nervous system4.86e-0954
ecto-epithelium1.72e-0873
brain grey matter4.56e-0829
regional part of telencephalon4.56e-0829
telencephalon4.56e-0829
central nervous system5.65e-0873
anterior neural tube1.34e-0740
nervous system1.80e-0775
regional part of brain2.25e-0746
regional part of forebrain3.71e-0739
forebrain3.71e-0739
future forebrain3.71e-0739
brain4.73e-0747
future brain4.73e-0747
ectoderm-derived structure7.99e-0795
ectoderm7.99e-0795
presumptive ectoderm7.99e-0795
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:5894070..5894097,-&oldid=4226459"