FFCP PHASE1:Mm9::chr19:5894100..5894155,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:5894100..5894155,-
|short_description=p1@Tigd3
|description=CAGE_peak_1_at_Tigd3_5end
|association_with_transcript=0bp_to_ENSMUST00000055911,NM_198634,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=332359 | |EntrezGene=332359 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7TM95 | |UniProt=Q7TM95 | ||
|association_with_transcript=0bp_to_ENSMUST00000055911,NM_198634,uc008gft.1,uc008gfu.1_5end | |||
|cluster_id=chr19:5894100..5894155,- | |||
|description=CAGE_peak_1_at_Tigd3_5end | |||
|id=chr19:5894100..5894155,- | |||
|ontology_enrichment_celltype=CL:0000117!4.32e-10!23;CL:0000337!4.32e-10!23;CL:0000540!7.70e-07!33;CL:0000047!7.70e-07!33;CL:0000031!7.70e-07!33;CL:0000404!7.70e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-10,23;CL:0000337,2.02e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0002346!6.86e-11!71;UBERON:0003075!6.86e-11!71;UBERON:0007284!6.86e-11!71;UBERON:0001017!1.18e-10!73;UBERON:0005743!1.18e-10!73;UBERON:0003056!1.23e-10!49;UBERON:0000955!6.34e-10!50;UBERON:0006238!6.34e-10!50;UBERON:0002020!7.53e-10!34;UBERON:0000073!8.44e-10!75;UBERON:0001016!8.44e-10!75;UBERON:0000033!1.14e-09!63;UBERON:0003080!1.20e-09!40;UBERON:0002616!1.46e-09!49;UBERON:0002780!2.67e-09!39;UBERON:0001890!2.67e-09!39;UBERON:0006240!2.67e-09!39;UBERON:0002791!6.04e-08!29;UBERON:0003528!6.04e-08!29;UBERON:0001893!6.04e-08!29;UBERON:0000153!6.58e-08!94;UBERON:0004121!1.63e-07!102;UBERON:0000924!1.63e-07!102;UBERON:0006601!1.63e-07!102;UBERON:0007811!1.81e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.02e-12,64;UBERON:0003075,2.02e-12,64;UBERON:0007284,2.02e-12,64;UBERON:0001049,6.02e-12,52;UBERON:0005068,6.02e-12,52;UBERON:0006241,6.02e-12,52;UBERON:0007135,6.02e-12,52;UBERON:0000073,1.04e-11,54;UBERON:0003056,6.40e-11,49;UBERON:0000955,3.04e-10,47;UBERON:0006238,3.04e-10,47;UBERON:0001017,4.00e-10,73;UBERON:0002616,7.45e-10,46;UBERON:0002020,8.23e-10,34;UBERON:0003080,1.75e-09,40;UBERON:0001016,2.97e-09,75;UBERON:0002780,4.10e-09,39;UBERON:0001890,4.10e-09,39;UBERON:0006240,4.10e-09,39;UBERON:0010371,3.56e-08,73;UBERON:0003528,8.66e-08,29;UBERON:0002791,8.66e-08,29;UBERON:0001893,8.66e-08,29;UBERON:0004121,7.83e-07,95;UBERON:0000924,7.83e-07,95;UBERON:0006601,7.83e-07,95 | |||
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| ||
|short_description=p1@Tigd3 | |||
}} | }} |
Latest revision as of 01:55, 26 September 2015
Short description: | p1@Tigd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tigd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000055911, NM_198634, uc008gft.1, uc008gfu.1_5end |
EntrezGene: | Tigd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.02e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.02e-12 | 64 |
neural plate | 2.02e-12 | 64 |
presumptive neural plate | 2.02e-12 | 64 |
neural tube | 6.02e-12 | 52 |
neural rod | 6.02e-12 | 52 |
future spinal cord | 6.02e-12 | 52 |
neural keel | 6.02e-12 | 52 |
regional part of nervous system | 1.04e-11 | 54 |
pre-chordal neural plate | 6.40e-11 | 49 |
brain | 3.04e-10 | 47 |
future brain | 3.04e-10 | 47 |
central nervous system | 4.00e-10 | 73 |
regional part of brain | 7.45e-10 | 46 |
gray matter | 8.23e-10 | 34 |
anterior neural tube | 1.75e-09 | 40 |
nervous system | 2.97e-09 | 75 |
regional part of forebrain | 4.10e-09 | 39 |
forebrain | 4.10e-09 | 39 |
future forebrain | 4.10e-09 | 39 |
ecto-epithelium | 3.56e-08 | 73 |
brain grey matter | 8.66e-08 | 29 |
regional part of telencephalon | 8.66e-08 | 29 |
telencephalon | 8.66e-08 | 29 |
ectoderm-derived structure | 7.83e-07 | 95 |
ectoderm | 7.83e-07 | 95 |
presumptive ectoderm | 7.83e-07 | 95 |