FFCP PHASE2:Hg19::chr1:203317193..203317209,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2331 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:3774 |TSSclassifier=strong ...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=3774 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 23:05, 19 September 2015
| Short description: | p11@FMOD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_FMOD_5end |
| Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
| Association with transcript: | 195bp_to_uc010pqi.1_5end |
| EntrezGene: | FMOD |
| HGNC: | 3774 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@FMOD |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 5.29e-25 | 15 |
| GAG secreting cell | 5.46e-19 | 9 |
| carbohydrate secreting cell | 5.46e-19 | 9 |
| adipocyte of omentum tissue | 3.64e-16 | 3 |
| omentum preadipocyte | 2.63e-15 | 3 |
| extracellular matrix secreting cell | 6.07e-15 | 15 |
| chondroblast | 2.38e-13 | 6 |
| chondrocyte | 2.38e-13 | 6 |
| adipocyte of breast | 9.88e-11 | 2 |
| preadipocyte | 6.51e-10 | 12 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 1.10e-29 | 6 |
| peritoneum | 1.10e-29 | 6 |
| abdominal cavity | 1.10e-29 | 6 |
| visceral peritoneum | 1.10e-29 | 6 |
| cavity lining | 2.98e-25 | 12 |
| serous membrane | 2.98e-25 | 12 |
| breast | 8.31e-12 | 10 |
| chest | 1.04e-10 | 11 |
| subdivision of trunk | 1.45e-07 | 112 |
| valve | 1.69e-07 | 3 |
Showing 1 to 10 of 21 entries
