FFCP PHASE2:Hg19::chr1:44398943..44398960,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9048 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:727 |TSSclassi...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=727 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T4W7 | ||
|association_with_transcript=-31bp_to_ENST00000372359,ENST00000414809,NM_001136215,NM_057090,NM_057091,uc001cks.2,uc001ckt.2,uc001ckv.2_5end | |association_with_transcript=-31bp_to_ENST00000372359,ENST00000414809,NM_001136215,NM_057090,NM_057091,uc001cks.2,uc001ckt.2,uc001ckv.2_5end | ||
|cluster_id=chr1:44398943..44398960,+ | |cluster_id=chr1:44398943..44398960,+ |
Latest revision as of 05:21, 18 September 2015
Short description: | p7@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARTN_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000372359, ENST00000414809, NM_001136215, NM_057090, NM_057091, uc001cks.2, uc001ckt.2, uc001ckv.2_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | Q5T4W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@ARTN |
---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.07e-16 | 253 |
endo-epithelial cell | 1.20e-13 | 42 |
mammary gland epithelial cell | 8.24e-13 | 4 |
corneal epithelial cell | 2.53e-12 | 2 |
sebum secreting cell | 6.52e-12 | 2 |
epithelial cell of sweat gland | 6.52e-12 | 2 |
epithelial cell of skin gland | 6.52e-12 | 2 |
acinar cell of sebaceous gland | 6.52e-12 | 2 |
respiratory epithelial cell | 1.97e-10 | 13 |
endodermal cell | 2.60e-09 | 58 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
mammary gland | 8.24e-13 | 4 |
mammary bud | 8.24e-13 | 4 |
mammary ridge | 8.24e-13 | 4 |
mammary placode | 8.24e-13 | 4 |
skin gland | 6.52e-12 | 2 |
epidermis gland | 6.52e-12 | 2 |
gland of integumental system | 6.52e-12 | 2 |
sebaceous gland | 6.52e-12 | 2 |
skin sebaceous gland | 6.52e-12 | 2 |
sweat gland | 6.52e-12 | 2 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.96e-14 | 14 |
Showing 1 to 1 of 1 entries