FFCP PHASE1:Mm9::chr1:34529626..34529637,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:34529626..34529637,+
|short_description=p3@Ptpn18
|description=CAGE_peak_3_at_Ptpn18_5end
|association_with_transcript=45bp_to_uc007aot.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19253 | |EntrezGene=19253 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1877 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_uc007aot.1_5end | |||
|cluster_id=chr1:34529626..34529637,+ | |||
|description=CAGE_peak_3_at_Ptpn18_5end | |||
|id=chr1:34529626..34529637,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.18e-13!32;CL:0002032!3.18e-13!32;CL:0000037!3.18e-13!32;CL:0000566!3.18e-13!32;CL:0000837!3.18e-13!32;CL:0002031!2.94e-09!25;CL:0000738!4.04e-09!17;CL:0002087!4.04e-09!17;CL:0000049!1.45e-07!19;CL:0000838!6.20e-07!12;CL:0000542!6.40e-07!13;CL:0000051!6.40e-07!13;CL:0002320!8.56e-07!46;CL:0000134!8.56e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.92e-25,32;CL:0002032,9.92e-25,32;CL:0000037,9.92e-25,32;CL:0000837,9.92e-25,32;CL:0002320,4.22e-19,46;CL:0000134,4.22e-19,46;CL:0002031,2.36e-18,25;CL:0000049,2.73e-15,19;CL:0000219,9.62e-15,54;CL:0000738,2.61e-14,17;CL:0002087,2.61e-14,17;CL:0000763,1.12e-11,16;CL:0000838,1.83e-11,12;CL:0000542,2.51e-10,13;CL:0000051,2.51e-10,13;CL:0000084,2.59e-10,11;CL:0000827,2.59e-10,11;CL:0000557,3.48e-09,7;CL:0000034,2.03e-08,97;CL:0000839,2.54e-08,13;CL:0000791,2.65e-08,9;CL:0000789,2.65e-08,9;CL:0002420,2.65e-08,9;CL:0002419,2.65e-08,9;CL:0000790,2.65e-08,9;CL:0000553,1.14e-07,6;CL:0000556,1.14e-07,6;CL:0000624,1.23e-07,8;CL:0000723,2.62e-07,91;CL:0000048,2.62e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.39e-21!48;UBERON:0002390!1.59e-19!45;UBERON:0003061!1.59e-19!45;UBERON:0002405!1.01e-14!70;UBERON:0002371!4.60e-11!16;UBERON:0003081!1.09e-10!88;UBERON:0001474!1.44e-10!22;UBERON:0004765!1.44e-10!22;UBERON:0001434!1.44e-10!22;UBERON:0004177!9.09e-10!29;UBERON:0003408!1.71e-07!24;UBERON:0000926!3.78e-07!193;UBERON:0004120!3.78e-07!193;UBERON:0006603!3.78e-07!193;UBERON:0002370!4.64e-07!23;UBERON:0000974!4.64e-07!23;UBERON:0004807!4.64e-07!23;UBERON:0005058!4.64e-07!23;UBERON:0003351!4.64e-07!23;UBERON:0009113!4.64e-07!23;UBERON:0003295!4.64e-07!23;UBERON:0009722!4.64e-07!23;UBERON:0005562!4.64e-07!23;UBERON:0007690!4.64e-07!23;UBERON:0002384!8.56e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.03e-39,48;UBERON:0002405,3.03e-39,48;UBERON:0002390,3.99e-36,45;UBERON:0003061,3.99e-36,45;UBERON:0002384,4.22e-19,46;UBERON:0002371,4.69e-19,16;UBERON:0003081,1.69e-18,87;UBERON:0004177,7.44e-18,29;UBERON:0005057,7.44e-18,29;UBERON:0001474,2.23e-17,22;UBERON:0004765,2.23e-17,22;UBERON:0001434,2.23e-17,22;UBERON:0000926,5.99e-14,120;UBERON:0004120,5.99e-14,120;UBERON:0006603,5.99e-14,120;UBERON:0002204,6.31e-14,32;UBERON:0003408,1.35e-13,24;UBERON:0000077,1.77e-13,35;UBERON:0002370,8.71e-13,23;UBERON:0000974,8.71e-13,23;UBERON:0004807,8.71e-13,23;UBERON:0005058,8.71e-13,23;UBERON:0003351,8.71e-13,23;UBERON:0009113,8.71e-13,23;UBERON:0003295,8.71e-13,23;UBERON:0009722,8.71e-13,23;UBERON:0005562,8.71e-13,23;UBERON:0007690,8.71e-13,23;UBERON:0006562,5.07e-12,24;UBERON:0001557,5.07e-12,24;UBERON:0001042,5.07e-12,24;UBERON:0008814,5.07e-12,24;UBERON:0009145,5.07e-12,24;UBERON:0000072,4.42e-10,27;UBERON:0001004,1.09e-07,42;UBERON:0007811,3.34e-07,36;UBERON:0000065,4.12e-07,41;UBERON:0001041,5.12e-07,80 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.48915275961142,1.40788722151667,1.17032263160997,1.19852577757853,1.59544317990673,4.96482116800497,5.15780374272085,1.66554880907831,3.64455481301687,2.79824751251259,20.1895785829272,17.1393042007173,18.2487550273153,0.255129870453209,5.56029326724958,4.96279599363977,2.23989391910769,2.2940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,2.09265815368454,5.4693474116666,1.57057123192139,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,12.080347636157,2.90144856804538,1.68046899571232,0,0,0,0,0,0,0,0,13.9484456178617,16.8107281636386,16.3410426437603,6.5912024314049,6.14749288514487,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,0,0,0,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.763991238884051,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,6.47344709117929,0.29688427812965,0.867426633830679,1.21786191324856,0.230615497256059,0.452167921657868,0.23517741427141,0.376999773989026,0,1.15679485535929,1.76922110389975,0.647067399789637,1.76673214768315,1.93950101254089,0,0.292780797011547,0.209446706813455,0.510914110417183,17.972268675888,27.5955256256968,16.3920592924253,0,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0,0.611036183101898,1.49288364732112,1.0108910337347,0.420883711772948,0.520481771850815,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0,0.431135985865684,0.567318240503458,0.527853372491847,1.09597866213787,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,24.5774615559632,14.9261786126535,8.52490498186778,0.207125772535502,0.469052119962192,0.540186184383045,0,0,0.925602677324269,0,0.536546802799238,0,0,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0.605050573870028,0.889512175379481,0,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.571242563048644,0,0.407302655690628,0.581857461502877,0.280543279561274,0.126473074248515,0.295220295959204,0.470996183524124,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,1.78238096246994,1.72617682470486,1.29708181420028,1.37280706594041,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,1.29327233116623,0,0.814824882210129,0.848725428875941,0,0.167506257441816,0.952174563544055,0.390267295715598,0.630540576424764,0.8858587585951,0.797273843287435,0.983179888294428,1.55416483679306,1.88043776155965,3.01582567878545,3.80733978673097,0,0.827810238914197,0.642202359951168,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,0.890328018336276,0.325773918707152,2.14461159864296,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.720244376125241,1.16422815404479,0.643011105094777,0.532020700926821,0.713475270408282,1.31639216481697,0,0,0,0.441056796109924,0.49465875882444,0.161464426695906,0.542816324353403,0.238744688006273,0.328281799490123,0.582961673259701,0.370850604021019,5.12612642393558,2.27025554759545,2.22233432843654,2.63715839806567,2.46049609897845,2.74533807847827,6.96911562974807,5.87796099759364,5.66619892598138,0,1.10717597753397,0,0.108005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0.90730481304255,2.4853572523477,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,6.32022241256356,1.82452693761148,0.924398614483445,1.29920822977795,1.43221356533985,1.39076948346885,3.24527713703916,3.69223817936443,3.02899349844443,4.26758117267999,5.04130925684203,4.67797827550812,3.65604998233252,4.20756847853648,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0.563047426353546,1.09890974560359,0.214368379079066,0,1.12950368523413,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.561849044819294,0.256100609619477,0.402048282689293,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0,0.581385666529314,0.282328141245992,0.423073039458382,0.73171189149109,0,0.271608227691724,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0,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| ||
|short_description=p3@Ptpn18 | |||
}} | }} |
Latest revision as of 02:00, 27 September 2015
Short description: | p3@Ptpn18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptpn18_5end |
Coexpression cluster: | MCL_coexpression_mm9:1877 |
Association with transcript: | 45bp_to_uc007aot.1_5end |
EntrezGene: | Ptpn18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.92e-25 | 32 |
hematopoietic oligopotent progenitor cell | 9.92e-25 | 32 |
hematopoietic stem cell | 9.92e-25 | 32 |
hematopoietic multipotent progenitor cell | 9.92e-25 | 32 |
connective tissue cell | 4.22e-19 | 46 |
mesenchymal cell | 4.22e-19 | 46 |
hematopoietic lineage restricted progenitor cell | 2.36e-18 | 25 |
common myeloid progenitor | 2.73e-15 | 19 |
motile cell | 9.62e-15 | 54 |
leukocyte | 2.61e-14 | 17 |
nongranular leukocyte | 2.61e-14 | 17 |
myeloid cell | 1.12e-11 | 16 |
lymphoid lineage restricted progenitor cell | 1.83e-11 | 12 |
lymphocyte | 2.51e-10 | 13 |
common lymphoid progenitor | 2.51e-10 | 13 |
T cell | 2.59e-10 | 11 |
pro-T cell | 2.59e-10 | 11 |
granulocyte monocyte progenitor cell | 3.48e-09 | 7 |
stem cell | 2.03e-08 | 97 |
myeloid lineage restricted progenitor cell | 2.54e-08 | 13 |
mature alpha-beta T cell | 2.65e-08 | 9 |
alpha-beta T cell | 2.65e-08 | 9 |
immature T cell | 2.65e-08 | 9 |
mature T cell | 2.65e-08 | 9 |
immature alpha-beta T cell | 2.65e-08 | 9 |
megakaryocyte progenitor cell | 1.14e-07 | 6 |
megakaryocyte | 1.14e-07 | 6 |
CD4-positive, alpha-beta T cell | 1.23e-07 | 8 |
somatic stem cell | 2.62e-07 | 91 |
multi fate stem cell | 2.62e-07 | 91 |