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FFCP PHASE1:Mm9::chr2:136539180..136539228,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:136539180..136539228,+
|DHSsupport=NA
|short_description=p1@Snap25
|DPIdataset=NA
|description=CAGE_peak_1_at_Snap25_5end
|association_with_transcript=0bp_to_ENSMUST00000028727,ENSMUST00000110098,ENSMUST00000125486,NM_011428,uc008mop.1_5end
|EntrezGene=20614
|EntrezGene=20614
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P60879
|UniProt=P60879
|association_with_transcript=0bp_to_ENSMUST00000028727,ENSMUST00000110098,ENSMUST00000125486,NM_011428,uc008mop.1_5end
|cluster_id=chr2:136539180..136539228,+
|description=CAGE_peak_1_at_Snap25_5end
|id=chr2:136539180..136539228,+
|ontology_enrichment_celltype=CL:0000540!9.37e-14!33;CL:0000047!9.37e-14!33;CL:0000031!9.37e-14!33;CL:0000404!9.37e-14!33;CL:0000117!3.10e-12!23;CL:0000337!3.10e-12!23;CL:0000221!4.53e-09!44;CL:0000133!4.53e-09!44;CL:0002319!6.26e-09!43;CL:0000393!8.07e-09!39;CL:0000211!8.07e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000540,3.28e-15,33;CL:0000047,3.28e-15,33;CL:0000031,3.28e-15,33;CL:0000404,3.28e-15,33;CL:0000117,1.65e-13,23;CL:0000337,1.65e-13,23;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39;CL:0000221,2.68e-10,44;CL:0000133,2.68e-10,44;CL:0002319,3.84e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.95e-28!71;UBERON:0003075!2.95e-28!71;UBERON:0007284!2.95e-28!71;UBERON:0004121!4.54e-26!102;UBERON:0000924!4.54e-26!102;UBERON:0006601!4.54e-26!102;UBERON:0000073!1.41e-25!75;UBERON:0001016!1.41e-25!75;UBERON:0001017!2.40e-25!73;UBERON:0005743!2.40e-25!73;UBERON:0000033!2.15e-23!63;UBERON:0001049!2.09e-21!52;UBERON:0005068!2.09e-21!52;UBERON:0006241!2.09e-21!52;UBERON:0007135!2.09e-21!52;UBERON:0000955!1.53e-20!50;UBERON:0006238!1.53e-20!50;UBERON:0003056!2.83e-20!49;UBERON:0002616!6.91e-20!49;UBERON:0003080!1.35e-16!40;UBERON:0002780!6.73e-16!39;UBERON:0001890!6.73e-16!39;UBERON:0006240!6.73e-16!39;UBERON:0002020!7.09e-16!34;UBERON:0002791!3.41e-13!29;UBERON:0003528!3.41e-13!29;UBERON:0001893!3.41e-13!29;UBERON:0007811!7.73e-11!86;UBERON:0000956!4.46e-09!21;UBERON:0001869!4.46e-09!21;UBERON:0000203!4.46e-09!21;UBERON:0000153!2.66e-08!94;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10;UBERON:0002619!3.47e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.67e-29,64;UBERON:0003075,2.67e-29,64;UBERON:0007284,2.67e-29,64;UBERON:0001016,6.31e-29,75;UBERON:0001017,1.14e-28,73;UBERON:0004121,1.73e-26,95;UBERON:0000924,1.73e-26,95;UBERON:0006601,1.73e-26,95;UBERON:0000073,1.27e-25,54;UBERON:0001049,4.38e-24,52;UBERON:0005068,4.38e-24,52;UBERON:0006241,4.38e-24,52;UBERON:0007135,4.38e-24,52;UBERON:0010371,8.21e-24,73;UBERON:0003056,5.83e-23,49;UBERON:0000955,9.01e-21,47;UBERON:0006238,9.01e-21,47;UBERON:0002616,4.69e-20,46;UBERON:0003080,7.88e-19,40;UBERON:0010314,9.33e-19,92;UBERON:0002020,4.80e-18,34;UBERON:0002780,4.82e-18,39;UBERON:0001890,4.82e-18,39;UBERON:0006240,4.82e-18,39;UBERON:0003528,4.99e-15,29;UBERON:0002791,4.99e-15,29;UBERON:0001893,4.99e-15,29;UBERON:0000956,2.14e-10,21;UBERON:0001869,2.14e-10,21;UBERON:0000203,2.14e-10,21;UBERON:0002619,2.89e-08,17;UBERON:0002021,2.99e-08,10;UBERON:0000411,2.99e-08,10;UBERON:0001950,2.99e-08,10
|phase1_expression=10.089377367602,0,0,0.30246421130683,0,2.35030980676646,1.63528848416868,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,310.918268792311,0,0,1.27993938234725,0.45881856213434,0,0.430761996159075,0,1.33016393619462,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,36.4169629547276,39.1453324661304,33.5930643858275,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0,37.5356396556689,30.3763361246304,35.3345935070322,204.526104833123,202.094714970726,25.6005770359254,18.6898668485561,28.4957823849107,1128.68778024373,1083.5547509909,1281.38570042358,29.6744147392936,32.1121629044458,35.9430225684164,1319.69803627953,581.333776162725,820.679388809247,233.640468280618,242.743715762471,85.557345633813,5.37655972665607,11.3357340160178,0,0,0,0,0,0,67.4133216632409,0,0,0.35333957451034,10.9857867425811,0,0,0,0.216491041011214,0,1.01104889002957,46.5870229253765,0,28.5008907004464,15.0932234286538,22.2259799167863,15.2206228188999,22.4576734423408,26.4574591055336,10.1789938977037,0,1.87979163995885,0,0.161766849947409,0,0,3.72783522436244,1047.86247250433,892.242971025319,3.32094171771169,0,0,0,1267.52839064361,821.213582059435,73.8847590423643,1491.06501860935,1198.79406396459,1121.01650039883,813.639934284805,0.509196819251581,0,0,108.798439493307,2.73252930221678,16.3230494147766,30.0703756774933,46.2663790755645,83.8209669544359,94.8041530107888,104.758528057777,249.64875276315,0,0.756424320671277,0.175951124163949,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.621377317606506,0.469052119962192,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.658239399653922,0.656669856316381,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1209.79807408942,93.7461018775281,2.97376904685418,2.90895623329899,1.49301775374664,3.71578674976702,4.12375876230699,6.6555563125703,5.11469500843202,5.1360919050391,4.2707615539006,4.44687177754829,6.03204501120647,5.57078121715222,4.874102177978,4.49409704327111,4.10662294761919,4.97853183135918,0.948339504765408,5.9409226557059,0,1.62921062276251,0.969762435838129,1.1221731182451,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,1.70542270593436,0.488894929326078,0.169745085775188,0.704070744865506,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0,0,0.655453258862952,1.03610989119537,0.433947175744535,0,0,0,0,2172.08893194484,1657.60767178694,0.163934945376675,0,12.6203287766503,15.2271110275689,22.1886099664783,2.15071918157297,6.68396022247182,9.6246020468203,23.4790206971439,30.6868650806877,36.7617633490267,932.795781572506,0,0.534196811001766,0.977321756121456,0,6.63725691699814,3.15614827001476,2.41858845571801,2.45186603682668,3.54362271456927,7.07100840271033,7.75284879504663,9.45187696641514,7.12994756769443,4.74055136903724,2.10837217149998,1.03135543248187,193.710135673905,3.96134406868882,2.32845630808958,5.14408884075822,25.7143338781297,22.4744710178609,32.0870590174136,18.5723618959906,0.23467170806371,0,24.6991805821557,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,4.95517422270746,2467.82534445787,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,12.4107180341965,1.10717597753397,5.08298667817122,4.86024033698106,3.97267762427491,7.42432716737004,6.20375993370175,8.76126630688561,3.14107130380836,5.18459893167171,0,0,0.149516546043979,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,0,0,0.167884616364078,12.5573236120924,0,0,2.14368379079066,0,577.741134997259,593.359229857751,559.71891663029,680.710455263347,1015.97737681986,1149.70951182712,988.907962839595,1127.15397167022,1259.2827545671,1161.33637925933,8.61434984948666,7.18244772121856,8.70741389346084,10.2104821168684,15.9306003597267,21.3258469802016,19.7799587743438,22.4578212390395,19.5760717851007,18.9522908822848,21.7992197905606,24.5214243801899,22.8485278226513,22.6649039513237,22.8018811753785,28.5776214769844,21.670368951688,24.6923802193542,20.192209139362,23.9934239819068,23.3151091622082,21.2970967391205,21.6976932852062,21.22057682832,22.77447006051,18.5305991282772,20.8537889074961,16.0472523977084,21.592854101492,20.7622640513363,16.4902675192602,20.5874368164928,20.0523211153148,20.9164735601054,13.5034627686799,20.9840885467875,11.462648813825,16.545071161719,13.1988949127502,11.0295709559758,18.5494268496337
|phase1_expression=10.089377367602,0,0,0.30246421130683,0,2.35030980676646,1.63528848416868,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,310.918268792311,0,0,1.27993938234725,0.45881856213434,0,0.430761996159075,0,1.33016393619462,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,36.4169629547276,39.1453324661304,33.5930643858275,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0,37.5356396556689,30.3763361246304,35.3345935070322,204.526104833123,202.094714970726,25.6005770359254,18.6898668485561,28.4957823849107,1128.68778024373,1083.5547509909,1281.38570042358,29.6744147392936,32.1121629044458,35.9430225684164,1319.69803627953,581.333776162725,820.679388809247,233.640468280618,242.743715762471,85.557345633813,5.37655972665607,11.3357340160178,0,0,0,0,0,0,67.4133216632409,0,0,0.35333957451034,10.9857867425811,0,0,0,0.216491041011214,0,1.01104889002957,46.5870229253765,0,28.5008907004464,15.0932234286538,22.2259799167863,15.2206228188999,22.4576734423408,26.4574591055336,10.1789938977037,0,1.87979163995885,0,0.161766849947409,0,0,3.72783522436244,1047.86247250433,892.242971025319,3.32094171771169,0,0,0,1267.52839064361,821.213582059435,73.8847590423643,1491.06501860935,1198.79406396459,1121.01650039883,813.639934284805,0.509196819251581,0,0,108.798439493307,2.73252930221678,16.3230494147766,30.0703756774933,46.2663790755645,83.8209669544359,94.8041530107888,104.758528057777,249.64875276315,0,0.756424320671277,0.175951124163949,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.621377317606506,0.469052119962192,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.658239399653922,0.656669856316381,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1209.79807408942,93.7461018775281,2.97376904685418,2.90895623329899,1.49301775374664,3.71578674976702,4.12375876230699,6.6555563125703,5.11469500843202,5.1360919050391,4.2707615539006,4.44687177754829,6.03204501120647,5.57078121715222,4.874102177978,4.49409704327111,4.10662294761919,4.97853183135918,0.948339504765408,5.9409226557059,0,1.62921062276251,0.969762435838129,1.1221731182451,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,1.70542270593436,0.488894929326078,0.169745085775188,0.704070744865506,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0,0,0.655453258862952,1.03610989119537,0.433947175744535,0,0,0,0,2172.08893194484,1657.60767178694,0.163934945376675,0,12.6203287766503,15.2271110275689,22.1886099664783,2.15071918157297,6.68396022247182,9.6246020468203,23.4790206971439,30.6868650806877,36.7617633490267,932.795781572506,0,0.534196811001766,0.977321756121456,0,6.63725691699814,3.15614827001476,2.41858845571801,2.45186603682668,3.54362271456927,7.07100840271033,7.75284879504663,9.45187696641514,7.12994756769443,4.74055136903724,2.10837217149998,1.03135543248187,193.710135673905,3.96134406868882,2.32845630808958,5.14408884075822,25.7143338781297,22.4744710178609,32.0870590174136,18.5723618959906,0.23467170806371,0,24.6991805821557,0,0.161464426695906,0.0603129249281559,0,0.328281799490123,4.95517422270746,2467.82534445787,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,12.4107180341965,1.10717597753397,5.08298667817122,4.86024033698106,3.97267762427491,7.42432716737004,6.20375993370175,8.76126630688561,3.14107130380836,5.18459893167171,0,0,0.149516546043979,0,0.194451188344048,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,0,0,0.167884616364078,12.5573236120924,0,0,2.14368379079066,0,577.741134997259,593.359229857751,559.71891663029,680.710455263347,1015.97737681986,1149.70951182712,988.907962839595,1127.15397167022,1259.2827545671,1161.33637925933,8.61434984948666,7.18244772121856,8.70741389346084,10.2104821168684,15.9306003597267,21.3258469802016,19.7799587743438,22.4578212390395,19.5760717851007,18.9522908822848,21.7992197905606,24.5214243801899,22.8485278226513,22.6649039513237,22.8018811753785,28.5776214769844,21.670368951688,24.6923802193542,20.192209139362,23.9934239819068,23.3151091622082,21.2970967391205,21.6976932852062,21.22057682832,22.77447006051,18.5305991282772,20.8537889074961,16.0472523977084,21.592854101492,20.7622640513363,16.4902675192602,20.5874368164928,20.0523211153148,20.9164735601054,13.5034627686799,20.9840885467875,11.462648813825,16.545071161719,13.1988949127502,11.0295709559758,18.5494268496337
|short_description=p1@Snap25
}}
}}

Latest revision as of 19:30, 25 September 2015

Short description:p1@Snap25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snap25_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000028727, ENSMUST00000110098, ENSMUST00000125486, NM_011428, uc008mop.1_5end
EntrezGene:Snap25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snap25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3310.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C336.42
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.33
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1204.53
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5202.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31128.69
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31083.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71281.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41319.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5581.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6820.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6233.64
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6242.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E185.56
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F911.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A767.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B646.59
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D728.50
adrenal gland, embryo E14.CNhs11038.406-44C515.09
adrenal gland, embryo E16.CNhs11004.1254-43D622.23
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F522.46
adrenal gland, neonate N00.CNhs11191.1311-23C126.46
adrenal gland, neonate N25.CNhs11223.1377-27I310.18
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21047.86
cerebellum, neonate N30.CNhs11135.1395-42I2892.24
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41267.53
corpus striatum, adult.CNhs10487.19-21D8821.21
corpus striatum, neonate N00.CNhs11226.630-43F173.88
cortex, adult.CNhs10473.12-14D51491.07
cortex, neonate N30.CNhs11107.1392-42F21198.79
diencephalon, adult.CNhs10482.20-12F21121.02
diencephalon, neonate N30.CNhs11201.1388-42B2813.64
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G4108.80
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C930.07
eyeball, embryo E17.CNhs11023.1261-18D446.27
eyeball, neonate N00.CNhs11207.633-15C683.82
eyeball, neonate N01.CNhs11140.1532-43E794.80
eyeball, neonate N02.CNhs11205.1551-44G8104.76
eyeball, neonate N16.CNhs11188.777-19A2249.65
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81209.80
hippocampus, neonate N00.CNhs11228.627-43G193.75
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22172.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31657.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D636.76
olfactory brain, adult.CNhs10489.18-22I9932.80
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G8193.71
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B925.71
pituitary gland, embryo E16.CNhs11036.449-43F622.47
pituitary gland, embryo E17.CNhs11039.1265-44F532.09
pituitary gland, neonate N00.CNhs11190.1308-22E918.57
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F824.70
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C92467.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A98.76
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E412.56
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1577.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2593.36
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3559.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7680.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41015.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51149.71
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6988.91
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71127.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81259.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91161.34
whole body, embryo E11.CNhs11014.324-5I88.61
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F221.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.99
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.77
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.92
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C216.55
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.28e-1533
neuronal stem cell3.28e-1533
neuroblast3.28e-1533
electrically signaling cell3.28e-1533
CNS neuron (sensu Vertebrata)1.65e-1323
neuroblast (sensu Vertebrata)1.65e-1323
electrically responsive cell1.24e-1039
electrically active cell1.24e-1039
ectodermal cell2.68e-1044
neurectodermal cell2.68e-1044
neural cell3.84e-1043

Uber anatomy
Ontology termp-valuen
neurectoderm2.67e-2964
neural plate2.67e-2964
presumptive neural plate2.67e-2964
nervous system6.31e-2975
central nervous system1.14e-2873
ectoderm-derived structure1.73e-2695
ectoderm1.73e-2695
presumptive ectoderm1.73e-2695
regional part of nervous system1.27e-2554
neural tube4.38e-2452
neural rod4.38e-2452
future spinal cord4.38e-2452
neural keel4.38e-2452
ecto-epithelium8.21e-2473
pre-chordal neural plate5.83e-2349
brain9.01e-2147
future brain9.01e-2147
regional part of brain4.69e-2046
anterior neural tube7.88e-1940
structure with developmental contribution from neural crest9.33e-1992
gray matter4.80e-1834
regional part of forebrain4.82e-1839
forebrain4.82e-1839
future forebrain4.82e-1839
brain grey matter4.99e-1529
regional part of telencephalon4.99e-1529
telencephalon4.99e-1529
cerebral cortex2.14e-1021
cerebral hemisphere2.14e-1021
pallium2.14e-1021
regional part of cerebral cortex2.89e-0817
occipital lobe2.99e-0810
visual cortex2.99e-0810
neocortex2.99e-0810
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