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FFCP PHASE1:Mm9::chr2:37631749..37631778,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:37631749..37631778,+
|DHSsupport=NA
|short_description=p1@Crb2
|DPIdataset=NA
|description=CAGE_peak_1_at_Crb2_5end
|association_with_transcript=0bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end
|EntrezGene=241324
|EntrezGene=241324
|HGNC=
|HGNC=
|MCL_coexpression_id=310
|TSSclassifier=NA
|UniProt=Q80YA8
|UniProt=Q80YA8
|association_with_transcript=0bp_to_ENSMUST00000050372,NM_001163566,uc008jnf.2_5end
|cluster_id=chr2:37631749..37631778,+
|description=CAGE_peak_1_at_Crb2_5end
|id=chr2:37631749..37631778,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,4.21e-10,8;CL:0002319,8.84e-08,43;CL:0000333,9.80e-08,10;CL:0000095,9.80e-08,10;CL:0000243,9.80e-08,10;CL:0000123,9.80e-08,10;CL:0000125,9.80e-08,10;CL:0000030,9.80e-08,10;CL:0000339,9.80e-08,10;CL:0000221,1.74e-07,44;CL:0000133,1.74e-07,44;CL:0000128,2.74e-07,6;CL:0000126,2.74e-07,6;CL:0000127,2.74e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.16e-10!49;UBERON:0002346!1.92e-09!71;UBERON:0003075!1.92e-09!71;UBERON:0007284!1.92e-09!71;UBERON:0000033!6.60e-09!63;UBERON:0001049!3.71e-07!52;UBERON:0005068!3.71e-07!52;UBERON:0006241!3.71e-07!52;UBERON:0007135!3.71e-07!52;UBERON:0000970!4.86e-07!9;UBERON:0000019!4.86e-07!9;UBERON:0000047!4.86e-07!9;UBERON:0004088!4.86e-07!9;UBERON:0002104!4.86e-07!9;UBERON:0001456!4.86e-07!9;UBERON:0003072!4.86e-07!9;UBERON:0003071!4.86e-07!9;UBERON:0004128!4.86e-07!9;UBERON:0004121!8.01e-07!102;UBERON:0000924!8.01e-07!102;UBERON:0006601!8.01e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.05e-17,49;UBERON:0002346,2.08e-14,64;UBERON:0003075,2.08e-14,64;UBERON:0007284,2.08e-14,64;UBERON:0004121,7.80e-13,95;UBERON:0000924,7.80e-13,95;UBERON:0006601,7.80e-13,95;UBERON:0000970,1.57e-12,9;UBERON:0000019,1.57e-12,9;UBERON:0000047,1.57e-12,9;UBERON:0010312,1.57e-12,9;UBERON:0004088,1.57e-12,9;UBERON:0002104,1.57e-12,9;UBERON:0001456,1.57e-12,9;UBERON:0003072,1.57e-12,9;UBERON:0004128,1.57e-12,9;UBERON:0003071,1.57e-12,9;UBERON:0010314,2.82e-12,92;UBERON:0010371,1.71e-11,73;UBERON:0000007,1.97e-11,8;UBERON:0003296,1.97e-11,8;UBERON:0010133,1.97e-11,8;UBERON:0001444,7.91e-10,11;UBERON:0001017,2.00e-09,73;UBERON:0002780,3.50e-09,39;UBERON:0001890,3.50e-09,39;UBERON:0006240,3.50e-09,39;UBERON:0001016,5.87e-09,75;UBERON:0000020,8.07e-09,12;UBERON:0001032,8.07e-09,12;UBERON:0004456,8.07e-09,12;UBERON:0003080,8.12e-09,40;UBERON:0001894,9.33e-09,10;UBERON:0006222,9.33e-09,10;UBERON:0001049,4.14e-08,52;UBERON:0005068,4.14e-08,52;UBERON:0006241,4.14e-08,52;UBERON:0007135,4.14e-08,52;UBERON:0002616,4.53e-08,46;UBERON:0000033,5.72e-08,13;UBERON:0005085,5.72e-08,13;UBERON:0000955,8.83e-08,47;UBERON:0006238,8.83e-08,47;UBERON:0000073,1.38e-07,54;UBERON:0001954,9.97e-07,7;UBERON:0003022,9.97e-07,7;UBERON:0002421,9.97e-07,7;UBERON:0000349,9.97e-07,7;UBERON:0002600,9.97e-07,7
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5149054941871,21.0898735425093,30.1366343565139,18.8981669194239,58.9385513896383,0,0,0,0,0.286533439938757,4.64104883049698,2.42779753031517,1.5869729378161,1.26766280701236,2.37191172448392,2.66788438833342,0,0,0,8.08920298399693,23.4373166246148,1.34796496001021,1.08004750665353,1.68259969081106,0.856952953211411,0.662605622854841,0.979926393719632,1.82106394934649,1.83843757322004,0,0.255374676170375,0.307213066512487,2.63772575460388,2.74462930807229,0.52091337055676,0,1.68828783009504,0.45839474333043,0.883885756421003,1.13897344639282,2.05039390407831,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.38788261412909,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0.988779870937496,0.578397427679647,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0.879580464790051,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,1.01839363850316,0,0,1.89397670297827,7.28674480591141,6.20735681970377,4.32149111532838,3.16480117455002,3.6739709541717,1.7935920839879,2.81105173679186,7.24369438069244,0.431135985865684,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0,2.9855140022774,0,0,0,3.52113813310353,2.81431271977315,1.62055855314913,1.89395788468168,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.32833492815819,0,0.146199987425332,0.658650345873152,0.536825675041487,1.47202963994889,1.85228302282712,0,0,3.41261200856374,2.09013004674395,0.77320476793256,1.00841762311671,1.11189021922435,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.758671603812327,0.799739588268102,3.38123207019241,0.814605311381257,0.193952487167626,1.05203729835478,0.569128834118316,0.442830443938806,0.156998727841375,0.246794327843601,0,0.500535317148282,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0.358794827043824,0,0,1.32643988239339,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,1.95872164033981,2.11753047159649,0.494910368917606,0,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,1.22974059177571,0.775284879504663,0,0.356497378384721,0.316036757935816,0,1.03135543248187,3.74483566329167,3.42116078659489,5.6917820864412,2.7863814554107,2.83744373827638,3.92411398724555,2.46823530903181,3.65357938937519,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,1.44470807574256,0.925972636848558,0,0,0,0,0,0,0,1.73984796469624,0.406638934253697,0.540026704109006,0.418176592028937,1.09181281873089,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,2.54178128274764,1.48912641411388,1.36115831840833,0.516639293910924,0.844780627453891,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.538283139656854,0.167884616364078,0.965947970160952,0.750729901804728,1.09890974560359,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0.62272408550506,2.39414924040619,0.853668028770671,0,0.419226325255965,0,0,0.618105171716683,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0.382576664137687,0,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5149054941871,21.0898735425093,30.1366343565139,18.8981669194239,58.9385513896383,0,0,0,0,0.286533439938757,4.64104883049698,2.42779753031517,1.5869729378161,1.26766280701236,2.37191172448392,2.66788438833342,0,0,0,8.08920298399693,23.4373166246148,1.34796496001021,1.08004750665353,1.68259969081106,0.856952953211411,0.662605622854841,0.979926393719632,1.82106394934649,1.83843757322004,0,0.255374676170375,0.307213066512487,2.63772575460388,2.74462930807229,0.52091337055676,0,1.68828783009504,0.45839474333043,0.883885756421003,1.13897344639282,2.05039390407831,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.38788261412909,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0.988779870937496,0.578397427679647,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0.879580464790051,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,1.01839363850316,0,0,1.89397670297827,7.28674480591141,6.20735681970377,4.32149111532838,3.16480117455002,3.6739709541717,1.7935920839879,2.81105173679186,7.24369438069244,0.431135985865684,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0,2.9855140022774,0,0,0,3.52113813310353,2.81431271977315,1.62055855314913,1.89395788468168,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.32833492815819,0,0.146199987425332,0.658650345873152,0.536825675041487,1.47202963994889,1.85228302282712,0,0,3.41261200856374,2.09013004674395,0.77320476793256,1.00841762311671,1.11189021922435,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.758671603812327,0.799739588268102,3.38123207019241,0.814605311381257,0.193952487167626,1.05203729835478,0.569128834118316,0.442830443938806,0.156998727841375,0.246794327843601,0,0.500535317148282,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0.358794827043824,0,0,1.32643988239339,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,1.95872164033981,2.11753047159649,0.494910368917606,0,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,1.22974059177571,0.775284879504663,0,0.356497378384721,0.316036757935816,0,1.03135543248187,3.74483566329167,3.42116078659489,5.6917820864412,2.7863814554107,2.83744373827638,3.92411398724555,2.46823530903181,3.65357938937519,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,1.44470807574256,0.925972636848558,0,0,0,0,0,0,0,1.73984796469624,0.406638934253697,0.540026704109006,0.418176592028937,1.09181281873089,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,2.54178128274764,1.48912641411388,1.36115831840833,0.516639293910924,0.844780627453891,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.538283139656854,0.167884616364078,0.965947970160952,0.750729901804728,1.09890974560359,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0.62272408550506,2.39414924040619,0.853668028770671,0,0.419226325255965,0,0,0.618105171716683,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0.382576664137687,0,0
|short_description=p1@Crb2
}}
}}

Latest revision as of 16:31, 26 September 2015

Short description:p1@Crb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Crb2_5end
Coexpression cluster:MCL_coexpression_mm9:310
Association with transcript: 0bp_to_ENSMUST00000050372, NM_001163566, uc008jnf.2_5end
EntrezGene:Crb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Crb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C242.51
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C330.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C458.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C67.29
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C75.69
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate4.05e-1749
neurectoderm2.08e-1464
neural plate2.08e-1464
presumptive neural plate2.08e-1464
ectoderm-derived structure7.80e-1395
ectoderm7.80e-1395
presumptive ectoderm7.80e-1395
eye1.57e-129
camera-type eye1.57e-129
simple eye1.57e-129
immature eye1.57e-129
ocular region1.57e-129
visual system1.57e-129
face1.57e-129
optic cup1.57e-129
optic vesicle1.57e-129
eye primordium1.57e-129
structure with developmental contribution from neural crest2.82e-1292
ecto-epithelium1.71e-1173
pituitary gland1.97e-118
gland of diencephalon1.97e-118
neuroendocrine gland1.97e-118
subdivision of head7.91e-1011
central nervous system2.00e-0973
regional part of forebrain3.50e-0939
forebrain3.50e-0939
future forebrain3.50e-0939
nervous system5.87e-0975
sense organ8.07e-0912
sensory system8.07e-0912
entire sense organ system8.07e-0912
anterior neural tube8.12e-0940
diencephalon9.33e-0910
future diencephalon9.33e-0910
neural tube4.14e-0852
neural rod4.14e-0852
future spinal cord4.14e-0852
neural keel4.14e-0852
regional part of brain4.53e-0846
head5.72e-0813
ectodermal placode5.72e-0813
brain8.83e-0847
future brain8.83e-0847
regional part of nervous system1.38e-0754
Ammon's horn9.97e-077
lobe parts of cerebral cortex9.97e-077
hippocampal formation9.97e-077
limbic system9.97e-077
limbic lobe9.97e-077
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