FFCP PHASE1:Mm9::chr2:51790210..51790230,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:51790210..51790230,-
|short_description=p2@Rbm43
|description=CAGE_peak_2_at_Rbm43_5end
|association_with_transcript=-16bp_to_ENSMUST00000132703_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71684 | |EntrezGene=71684 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENSMUST00000132703_5end | |||
|cluster_id=chr2:51790210..51790230,- | |||
|description=CAGE_peak_2_at_Rbm43_5end | |||
|id=chr2:51790210..51790230,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.85e-15,32;CL:0002032,7.85e-15,32;CL:0000037,7.85e-15,32;CL:0000837,7.85e-15,32;CL:0000049,1.30e-14,19;CL:0000763,1.26e-11,16;CL:0002031,2.55e-11,25;CL:0000050,1.07e-10,9;CL:0002320,1.60e-10,46;CL:0000134,1.60e-10,46;CL:0000839,2.40e-10,13;CL:0000553,1.24e-09,6;CL:0000556,1.24e-09,6;CL:0000219,4.48e-08,54;CL:0000034,3.59e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.86e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.32e-09!70;UBERON:0002193!5.29e-08!48;UBERON:0003081!8.37e-08!88;UBERON:0000914!2.18e-07!17;UBERON:0002204!2.32e-07!32;UBERON:0002390!2.75e-07!45;UBERON:0003061!2.75e-07!45;UBERON:0005057!7.22e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.69e-14,32;UBERON:0002384,1.60e-10,46;UBERON:0001474,4.45e-10,22;UBERON:0004765,4.45e-10,22;UBERON:0001434,4.45e-10,22;UBERON:0002106,3.09e-09,6;UBERON:0004457,3.09e-09,6;UBERON:0000042,3.09e-09,6;UBERON:0004854,3.09e-09,6;UBERON:0009034,3.09e-09,6;UBERON:0002095,3.09e-09,6;UBERON:0004782,3.09e-09,6;UBERON:0003281,3.09e-09,6;UBERON:0009664,3.09e-09,6;UBERON:0002296,3.09e-09,6;UBERON:0005602,3.09e-09,6;UBERON:0001179,3.09e-09,6;UBERON:0006293,3.09e-09,6;UBERON:0002193,1.29e-08,48;UBERON:0002405,1.29e-08,48;UBERON:0003887,1.36e-08,10;UBERON:0002390,2.29e-08,45;UBERON:0003061,2.29e-08,45;UBERON:0002371,8.89e-08,16 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,1.80772652818207,0,0,0.34243593645101,0.0797721589953364,1.02720437958723,1.13646523144697,4.33042690360362,4.45445588257617,6.29605690315332,5.0473946457318,4.11343300817216,2.54633791078818,0.0850432901510698,5.36171136484781,3.13439746966722,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0,0,4.44521471421742,3.69038872550742,0,0.288851619751275,0,0.204169356262369,19.2524550138978,14.0640362014284,17.7998072951091,29.4115744015507,13.6609096991689,15.5363312969969,1.6366586336825,0.912392380975631,0.734187008646726,0,0,0.219686182734472,0,0,0,0.838913030288682,0,1.34437519656986,0.514518872071894,0.85960031981627,2.06268836910977,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,1.73918693221007,0.860423876981386,0,0,0,0.448026887097336,1.12355536105401,1.02258193546835,0.779358013808606,0.70667914902068,0,2.56652954828636,0,7.11066703153331,0.216491041011214,0.253359865475099,0,0.68510327831436,5.43769555659061,0.29688427812965,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,2.65383165584962,0.970601099684455,1.32504911076236,2.90925151881133,0,0.585561594023094,0,0.510914110417183,2.03685711660064,1.79970819298022,2.03312363316904,0.449371918214468,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,3.6078021476927,1.0108910337347,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,2.05878325691772,3.9782889915383,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.536825675041487,0.210289948564127,0,0.660837565967596,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.379335801906163,0,0,0,0.581857461502877,0,0.0632365371242573,0.295220295959204,0,0.123397163921801,0,2.50267658574141,1.17935397067922,2.47348323623339,1.42002084971952,1.68824011826692,2.03700681425136,3.45235364940973,1.94562272130042,1.37280706594041,0,1.48856379067401,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.390267295715598,1.10344600874334,0.8858587585951,0.478364305972461,0.491589944147214,0.345369963731791,1.15719246865209,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,0.160550589987792,0,0.327869890753351,1.00988370881749,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0.651547837414304,0.989820737835213,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,4.61351378154202,2.06386867963222,3.1483069652851,4.70921142511728,4.51090951479383,3.43167259809784,3.56954702987096,5.03825228365169,3.45499934511059,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,1.86401793926078,0,0,0,0.388902376688095,0.516639293910924,0.506868376472335,0.469428954583016,0.5208175393758,0,0.241584120826006,0,0.948033361884535,0.810900861160657,0.513554785824136,0.649604114888975,0.895133478337407,0.39736270956253,0.721172697119813,0.590758108698309,0.605798699688886,0.609654453239999,0.403304740547362,0.779663045918019,0.288635524920988,0.701261413089414,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0.750729901804728,0.549454872801795,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,1.10295709559758,1.62307484934295 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|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,1.80772652818207,0,0,0.34243593645101,0.0797721589953364,1.02720437958723,1.13646523144697,4.33042690360362,4.45445588257617,6.29605690315332,5.0473946457318,4.11343300817216,2.54633791078818,0.0850432901510698,5.36171136484781,3.13439746966722,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0,0,4.44521471421742,3.69038872550742,0,0.288851619751275,0,0.204169356262369,19.2524550138978,14.0640362014284,17.7998072951091,29.4115744015507,13.6609096991689,15.5363312969969,1.6366586336825,0.912392380975631,0.734187008646726,0,0,0.219686182734472,0,0,0,0.838913030288682,0,1.34437519656986,0.514518872071894,0.85960031981627,2.06268836910977,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,1.73918693221007,0.860423876981386,0,0,0,0.448026887097336,1.12355536105401,1.02258193546835,0.779358013808606,0.70667914902068,0,2.56652954828636,0,7.11066703153331,0.216491041011214,0.253359865475099,0,0.68510327831436,5.43769555659061,0.29688427812965,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,2.65383165584962,0.970601099684455,1.32504911076236,2.90925151881133,0,0.585561594023094,0,0.510914110417183,2.03685711660064,1.79970819298022,2.03312363316904,0.449371918214468,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.509196819251581,3.6078021476927,1.0108910337347,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,2.05878325691772,3.9782889915383,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0,0.32833492815819,0.243206428637567,0.438599962275997,0.219550115291051,0.536825675041487,0.210289948564127,0,0.660837565967596,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.379335801906163,0,0,0,0.581857461502877,0,0.0632365371242573,0.295220295959204,0,0.123397163921801,0,2.50267658574141,1.17935397067922,2.47348323623339,1.42002084971952,1.68824011826692,2.03700681425136,3.45235364940973,1.94562272130042,1.37280706594041,0,1.48856379067401,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.390267295715598,1.10344600874334,0.8858587585951,0.478364305972461,0.491589944147214,0.345369963731791,1.15719246865209,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,0.160550589987792,0,0.327869890753351,1.00988370881749,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0.651547837414304,0.989820737835213,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.948110273807448,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,4.61351378154202,2.06386867963222,3.1483069652851,4.70921142511728,4.51090951479383,3.43167259809784,3.56954702987096,5.03825228365169,3.45499934511059,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.578574190077352,0.523511883968059,0.129614973291793,1.86401793926078,0,0,0,0.388902376688095,0.516639293910924,0.506868376472335,0.469428954583016,0.5208175393758,0,0.241584120826006,0,0.948033361884535,0.810900861160657,0.513554785824136,0.649604114888975,0.895133478337407,0.39736270956253,0.721172697119813,0.590758108698309,0.605798699688886,0.609654453239999,0.403304740547362,0.779663045918019,0.288635524920988,0.701261413089414,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0.750729901804728,0.549454872801795,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.919217542250071,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0.382576664137687,1.10295709559758,1.62307484934295 | ||
|short_description=p2@Rbm43 | |||
}} | }} |
Latest revision as of 18:18, 26 September 2015
Short description: | p2@Rbm43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rbm43_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -16bp_to_ENSMUST00000132703_5end |
EntrezGene: | Rbm43 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.85e-15 | 32 |
hematopoietic oligopotent progenitor cell | 7.85e-15 | 32 |
hematopoietic stem cell | 7.85e-15 | 32 |
hematopoietic multipotent progenitor cell | 7.85e-15 | 32 |
common myeloid progenitor | 1.30e-14 | 19 |
myeloid cell | 1.26e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 2.55e-11 | 25 |
megakaryocyte-erythroid progenitor cell | 1.07e-10 | 9 |
connective tissue cell | 1.60e-10 | 46 |
mesenchymal cell | 1.60e-10 | 46 |
myeloid lineage restricted progenitor cell | 2.40e-10 | 13 |
megakaryocyte progenitor cell | 1.24e-09 | 6 |
megakaryocyte | 1.24e-09 | 6 |
motile cell | 4.48e-08 | 54 |
stem cell | 3.59e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.69e-14 | 32 |
connective tissue | 1.60e-10 | 46 |
bone element | 4.45e-10 | 22 |
skeletal element | 4.45e-10 | 22 |
skeletal system | 4.45e-10 | 22 |
spleen | 3.09e-09 | 6 |
cavity lining | 3.09e-09 | 6 |
serous membrane | 3.09e-09 | 6 |
gastrointestinal system mesentery | 3.09e-09 | 6 |
stomach region | 3.09e-09 | 6 |
mesentery | 3.09e-09 | 6 |
gastrointestinal system serosa | 3.09e-09 | 6 |
mesentery of stomach | 3.09e-09 | 6 |
gut mesentery | 3.09e-09 | 6 |
dorsal mesentery | 3.09e-09 | 6 |
dorsal mesogastrium | 3.09e-09 | 6 |
peritoneal cavity | 3.09e-09 | 6 |
spleen primordium | 3.09e-09 | 6 |
hemolymphoid system | 1.29e-08 | 48 |
immune system | 1.29e-08 | 48 |
intraembryonic coelom | 1.36e-08 | 10 |
hematopoietic system | 2.29e-08 | 45 |
blood island | 2.29e-08 | 45 |
bone marrow | 8.89e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.86e-07 | 6 |