Personal tools

FFCP PHASE1:Mm9::chr2:92755208..92755223,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr2:92755208..92755223,+ |short_description=p3@Syt13 |description=CAGE_peak_3_at_Syt13_5end |association_with_transcript=-31bp_to_ENSMUST00000028648_5end |Ent...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:92755208..92755223,+
|DHSsupport=NA
|short_description=p3@Syt13
|DPIdataset=NA
|description=CAGE_peak_3_at_Syt13_5end
|association_with_transcript=-31bp_to_ENSMUST00000028648_5end
|EntrezGene=80976
|EntrezGene=80976
|HGNC=
|HGNC=
|MCL_coexpression_id=1785
|TSSclassifier=NA
|UniProt=Q9EQT6
|UniProt=Q9EQT6
|association_with_transcript=-31bp_to_ENSMUST00000028648_5end
|cluster_id=chr2:92755208..92755223,+
|description=CAGE_peak_3_at_Syt13_5end
|id=chr2:92755208..92755223,+
|ontology_enrichment_celltype=CL:0000117!8.91e-10!23;CL:0000337!8.91e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-17,23;CL:0000337,2.49e-17,23;CL:0000540,1.91e-10,33;CL:0000047,1.91e-10,33;CL:0000031,1.91e-10,33;CL:0000404,1.91e-10,33;CL:0000393,4.60e-08,39;CL:0000211,4.60e-08,39;CL:0002319,7.23e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.56e-21!86;UBERON:0000033!3.60e-21!63;UBERON:0001049!8.31e-21!52;UBERON:0005068!8.31e-21!52;UBERON:0006241!8.31e-21!52;UBERON:0007135!8.31e-21!52;UBERON:0000153!8.23e-20!94;UBERON:0000955!2.74e-19!50;UBERON:0006238!2.74e-19!50;UBERON:0002616!8.36e-19!49;UBERON:0003056!9.66e-19!49;UBERON:0001017!1.35e-18!73;UBERON:0005743!1.35e-18!73;UBERON:0002346!1.34e-17!71;UBERON:0003075!1.34e-17!71;UBERON:0007284!1.34e-17!71;UBERON:0000073!2.00e-17!75;UBERON:0001016!2.00e-17!75;UBERON:0003080!6.41e-16!40;UBERON:0002780!2.76e-15!39;UBERON:0001890!2.76e-15!39;UBERON:0006240!2.76e-15!39;UBERON:0002020!2.66e-14!34;UBERON:0004121!2.52e-13!102;UBERON:0000924!2.52e-13!102;UBERON:0006601!2.52e-13!102;UBERON:0002791!4.56e-11!29;UBERON:0003528!4.56e-11!29;UBERON:0001893!4.56e-11!29;UBERON:0002021!3.45e-09!10;UBERON:0000411!3.45e-09!10;UBERON:0001950!3.45e-09!10;UBERON:0002619!8.72e-08!17;UBERON:0002420!9.86e-07!8;UBERON:0007245!9.86e-07!8;UBERON:0010009!9.86e-07!8;UBERON:0010011!9.86e-07!8;UBERON:0000454!9.86e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-36,54;UBERON:0001049,1.28e-33,52;UBERON:0005068,1.28e-33,52;UBERON:0006241,1.28e-33,52;UBERON:0007135,1.28e-33,52;UBERON:0001017,1.72e-31,73;UBERON:0001016,2.70e-30,75;UBERON:0002346,2.01e-29,64;UBERON:0003075,2.01e-29,64;UBERON:0007284,2.01e-29,64;UBERON:0000955,3.46e-27,47;UBERON:0006238,3.46e-27,47;UBERON:0002616,2.52e-26,46;UBERON:0004121,1.63e-24,95;UBERON:0000924,1.63e-24,95;UBERON:0006601,1.63e-24,95;UBERON:0010371,2.83e-24,73;UBERON:0002020,8.44e-24,34;UBERON:0003080,1.54e-23,40;UBERON:0002780,2.06e-22,39;UBERON:0001890,2.06e-22,39;UBERON:0006240,2.06e-22,39;UBERON:0003056,1.25e-21,49;UBERON:0003528,7.36e-18,29;UBERON:0002791,7.36e-18,29;UBERON:0001893,7.36e-18,29;UBERON:0010314,9.10e-17,92;UBERON:0002021,8.20e-16,10;UBERON:0000411,8.20e-16,10;UBERON:0001950,8.20e-16,10;UBERON:0002619,1.38e-11,17;UBERON:0000956,1.94e-10,21;UBERON:0001869,1.94e-10,21;UBERON:0000203,1.94e-10,21;UBERON:0003076,2.40e-10,12;UBERON:0003057,2.40e-10,12;UBERON:0002420,3.00e-09,8;UBERON:0007245,3.00e-09,8;UBERON:0010009,3.00e-09,8;UBERON:0010011,3.00e-09,8;UBERON:0000454,3.00e-09,8;UBERON:0000025,3.13e-09,114;UBERON:0002240,1.32e-08,6;UBERON:0005174,1.32e-08,6;UBERON:0001137,1.32e-08,6;UBERON:0011216,5.87e-08,194;UBERON:0004111,5.90e-08,122;UBERON:0001948,1.26e-07,5;UBERON:0002315,1.26e-07,5;UBERON:0000483,1.94e-07,174;UBERON:0000119,3.25e-07,176
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.03474691289397,6.34789175126439,4.43681982454325,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,8.56952953211411,6.84692476950002,0.122490799214954,0.0958454710182364,1.83843757322004,6.60695285996332,7.53355294702608,6.91229399653096,18.0684214190366,21.0421580285542,12.5019208933622,10.3297709630511,3.37657566019008,7.63991238884051,7.36571463684169,7.83044244395066,3.91438836233131,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.39246301857362,4.57500602818627,0.753926112677186,9.03886464999838,8.95004100656157,7.89594569326328,6.16516799657479,0.305518091550949,0,0,1.05220927943237,0.260240885925407,1.14951052216736,1.44049703844279,0.753524089178575,0.408218994907967,0.512454881139399,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,7.78072809687271,0.720332286654991,0.330418782983798,0,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,4.81651769963376,3.04750385139728,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0,0.534196811001766,0.162886959353576,0,1.32745138339963,0.728341908464944,0.906970670894253,1.69744571780308,2.36241514304618,1.53717573971964,0.775284879504663,1.09060118843252,2.13898427030833,0,0,1.03135543248187,2.38307724027652,0.18006109403131,0.388076051348264,0.643011105094777,1.59606210278046,2.49716344642899,1.15184314421485,3.04464949114599,0.469343416127421,0,0.220528398054962,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,1.16670713006429,0.387479470433193,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,2.21207784439725,0,0.102710957164827,0.649604114888975,1.07416017400489,1.19208812868759,0.721172697119813,0.886137163047463,1.00966449948148,0.685861259894999,1.31074040677893,1.8516997340553,1.53938946624527,1.8700304349051,0,0,0,0.167884616364078,0,0,0,0.428736758158132,0,16.942555278512,9.20650473014354,10.8850147553485,14.4356673168698,14.3867329151835,13.5970901530146,8.10027000278167,12.6089936902782,8.15656336171568,13.9795284172991,0.103787347584177,1.59609949360412,0.341467211508268,0.243106717068294,0,0.735374033800057,1.33348036680969,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.749132059759059,0.448176066834085,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.676916863133412,0.365855945745545,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0,0.619747364743864,0.578719832943424,2.24829520144151,0.467863216890817,0,0.382576664137687,0.220591419119515,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,3.03474691289397,6.34789175126439,4.43681982454325,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,8.56952953211411,6.84692476950002,0.122490799214954,0.0958454710182364,1.83843757322004,6.60695285996332,7.53355294702608,6.91229399653096,18.0684214190366,21.0421580285542,12.5019208933622,10.3297709630511,3.37657566019008,7.63991238884051,7.36571463684169,7.83044244395066,3.91438836233131,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,4.1889341362691,0,0,0,0,5.39246301857362,4.57500602818627,0.753926112677186,9.03886464999838,8.95004100656157,7.89594569326328,6.16516799657479,0.305518091550949,0,0,1.05220927943237,0.260240885925407,1.14951052216736,1.44049703844279,0.753524089178575,0.408218994907967,0.512454881139399,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,7.78072809687271,0.720332286654991,0.330418782983798,0,0,0.232236671860439,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,4.81651769963376,3.04750385139728,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0,0.534196811001766,0.162886959353576,0,1.32745138339963,0.728341908464944,0.906970670894253,1.69744571780308,2.36241514304618,1.53717573971964,0.775284879504663,1.09060118843252,2.13898427030833,0,0,1.03135543248187,2.38307724027652,0.18006109403131,0.388076051348264,0.643011105094777,1.59606210278046,2.49716344642899,1.15184314421485,3.04464949114599,0.469343416127421,0,0.220528398054962,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,1.16670713006429,0.387479470433193,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,2.21207784439725,0,0.102710957164827,0.649604114888975,1.07416017400489,1.19208812868759,0.721172697119813,0.886137163047463,1.00966449948148,0.685861259894999,1.31074040677893,1.8516997340553,1.53938946624527,1.8700304349051,0,0,0,0.167884616364078,0,0,0,0.428736758158132,0,16.942555278512,9.20650473014354,10.8850147553485,14.4356673168698,14.3867329151835,13.5970901530146,8.10027000278167,12.6089936902782,8.15656336171568,13.9795284172991,0.103787347584177,1.59609949360412,0.341467211508268,0.243106717068294,0,0.735374033800057,1.33348036680969,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.749132059759059,0.448176066834085,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.676916863133412,0.365855945745545,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0,0.619747364743864,0.578719832943424,2.24829520144151,0.467863216890817,0,0.382576664137687,0.220591419119515,0.695603506861264
|short_description=p3@Syt13
}}
}}

Latest revision as of 03:28, 27 September 2015

Short description:p3@Syt13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Syt13_5end
Coexpression cluster:MCL_coexpression_mm9:1785
Association with transcript: -31bp_to_ENSMUST00000028648_5end
EntrezGene:Syt13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Syt13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.49e-1723
neuroblast (sensu Vertebrata)2.49e-1723
neuron1.91e-1033
neuronal stem cell1.91e-1033
neuroblast1.91e-1033
electrically signaling cell1.91e-1033
electrically responsive cell4.60e-0839
electrically active cell4.60e-0839
neural cell7.23e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.29e-3654
neural tube1.28e-3352
neural rod1.28e-3352
future spinal cord1.28e-3352
neural keel1.28e-3352
central nervous system1.72e-3173
nervous system2.70e-3075
neurectoderm2.01e-2964
neural plate2.01e-2964
presumptive neural plate2.01e-2964
brain3.46e-2747
future brain3.46e-2747
regional part of brain2.52e-2646
ectoderm-derived structure1.63e-2495
ectoderm1.63e-2495
presumptive ectoderm1.63e-2495
ecto-epithelium2.83e-2473
gray matter8.44e-2434
anterior neural tube1.54e-2340
regional part of forebrain2.06e-2239
forebrain2.06e-2239
future forebrain2.06e-2239
pre-chordal neural plate1.25e-2149
brain grey matter7.36e-1829
regional part of telencephalon7.36e-1829
telencephalon7.36e-1829
structure with developmental contribution from neural crest9.10e-1792
occipital lobe8.20e-1610
visual cortex8.20e-1610
neocortex8.20e-1610
regional part of cerebral cortex1.38e-1117
cerebral cortex1.94e-1021
cerebral hemisphere1.94e-1021
pallium1.94e-1021
posterior neural tube2.40e-1012
chordal neural plate2.40e-1012
basal ganglion3.00e-098
nuclear complex of neuraxis3.00e-098
aggregate regional part of brain3.00e-098
collection of basal ganglia3.00e-098
cerebral subcortex3.00e-098
tube3.13e-09114
spinal cord1.32e-086
dorsal region element1.32e-086
dorsum1.32e-086
organ system subdivision5.87e-08194
anatomical conduit5.90e-08122
regional part of spinal cord1.26e-075
gray matter of spinal cord1.26e-075
epithelium1.94e-07174
cell layer3.25e-07176
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:92755208..92755223,%2B&oldid=4290298"