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FFCP PHASE1:Mm9::chr3:108394385..108394407,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:108394385..108394407,+
|DHSsupport=NA
|short_description=p3@Wdr47
|DPIdataset=NA
|description=CAGE_peak_3_at_Wdr47_5end
|association_with_transcript=76bp_to_ENSMUST00000139626_5end
|EntrezGene=99512
|EntrezGene=99512
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2AGC6
|UniProt=A2AGC6
|association_with_transcript=76bp_to_ENSMUST00000139626_5end
|cluster_id=chr3:108394385..108394407,+
|description=CAGE_peak_3_at_Wdr47_5end
|id=chr3:108394385..108394407,+
|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23;CL:0000540!6.68e-07!33;CL:0000047!6.68e-07!33;CL:0000031!6.68e-07!33;CL:0000404!6.68e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.97e-09,23;CL:0000337,3.97e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.97e-18!75;UBERON:0001016!4.97e-18!75;UBERON:0001017!8.04e-18!73;UBERON:0005743!8.04e-18!73;UBERON:0004121!8.17e-18!102;UBERON:0000924!8.17e-18!102;UBERON:0006601!8.17e-18!102;UBERON:0001049!2.31e-17!52;UBERON:0005068!2.31e-17!52;UBERON:0006241!2.31e-17!52;UBERON:0007135!2.31e-17!52;UBERON:0000033!1.68e-16!63;UBERON:0000955!3.08e-16!50;UBERON:0006238!3.08e-16!50;UBERON:0002616!1.17e-15!49;UBERON:0002346!1.51e-15!71;UBERON:0003075!1.51e-15!71;UBERON:0007284!1.51e-15!71;UBERON:0002020!2.03e-14!34;UBERON:0002791!3.12e-13!29;UBERON:0003528!3.12e-13!29;UBERON:0001893!3.12e-13!29;UBERON:0003080!4.31e-13!40;UBERON:0003056!4.69e-13!49;UBERON:0002780!1.52e-12!39;UBERON:0001890!1.52e-12!39;UBERON:0006240!1.52e-12!39;UBERON:0000956!2.48e-09!21;UBERON:0001869!2.48e-09!21;UBERON:0000203!2.48e-09!21;UBERON:0002021!4.01e-08!10;UBERON:0000411!4.01e-08!10;UBERON:0001950!4.01e-08!10;UBERON:0007811!4.75e-08!86;UBERON:0002619!6.13e-08!17;UBERON:0000153!6.03e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.78e-21,73;UBERON:0000073,4.24e-21,54;UBERON:0002020,6.38e-21,34;UBERON:0004121,8.40e-21,95;UBERON:0000924,8.40e-21,95;UBERON:0006601,8.40e-21,95;UBERON:0001049,8.68e-21,52;UBERON:0005068,8.68e-21,52;UBERON:0006241,8.68e-21,52;UBERON:0007135,8.68e-21,52;UBERON:0003528,3.17e-20,29;UBERON:0002791,3.17e-20,29;UBERON:0001893,3.17e-20,29;UBERON:0002346,5.59e-20,64;UBERON:0003075,5.59e-20,64;UBERON:0007284,5.59e-20,64;UBERON:0000955,1.33e-19,47;UBERON:0006238,1.33e-19,47;UBERON:0001017,1.72e-19,73;UBERON:0001016,1.89e-19,75;UBERON:0002616,1.05e-18,46;UBERON:0003080,1.40e-16,40;UBERON:0002780,1.01e-15,39;UBERON:0001890,1.01e-15,39;UBERON:0006240,1.01e-15,39;UBERON:0003056,6.04e-15,49;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002021,1.30e-12,10;UBERON:0000411,1.30e-12,10;UBERON:0001950,1.30e-12,10;UBERON:0002619,1.81e-12,17;UBERON:0010314,3.56e-11,92;UBERON:0002420,9.05e-08,8;UBERON:0007245,9.05e-08,8;UBERON:0010009,9.05e-08,8;UBERON:0010011,9.05e-08,8;UBERON:0000454,9.05e-08,8
|phase1_expression=0.640595388419176,0.348975407639361,0,0,1.00179145989269,0,0,0.258246646883153,0.985521055061667,0.234064526321993,0,0.159544317990673,0.171200729931206,0.262261207256992,0.333109761815663,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,1.25896817975577,1.52065396829272,0.734187008646726,0.782391344348039,0.65407546914134,0,0.194429899074283,0.139986421625363,1.43752564364972,1.34226084846189,0,0.672187598284928,0,0.85960031981627,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,1.65903379693564,1.35005938331691,0.841299845405528,0.571301968807607,0.441737081903227,2.08234358665422,0.575072826109418,1.83843757322004,0,4.08599481872601,4.14737639791857,2.37395317914349,2.19570344645783,1.04182674111352,1.67509799400829,3.93933827022176,3.51435969886663,2.94628585473668,1.99320353118744,3.16879057903011,0.454357159999104,1.058001841495,0.869593466105033,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.823120949949934,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0.161766849947409,0,0.484875253135222,1.86391761218122,2.04946557908083,2.30391377494801,0.510914110417183,0.11981512450592,0,0.127070227073065,3.44518470631092,2.74500361691176,4.14659361972453,9.21268897019065,12.7857728665165,4.98691306942944,6.97637431191358,0.407357455401265,0.373220911830279,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0,0.753524089178575,0.612328492361951,1.0249097622788,0.937017245597288,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,0,0.702213187313235,0,0,0,0,0.540186184383045,0.473489471170421,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,0.492502392237286,0.729619285912702,0,0.219550115291051,1.07365135008297,9.67333763394985,6.89460902941206,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.380451252225118,1.42358718463353,0.164698954724011,0.754005626400808,0.397912944082302,0,0,0.432276099749388,0,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.442830443938806,0.31399745568275,0.740382983530803,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,1.47476983244164,0.172684981865896,1.01254341007058,0,1.63171705145613,0,0,4.33486592967038,4.33683240391152,0.491804836130026,0.252470927204373,1.57754109708128,0.390438744296638,1.50796378412959,0.238968797952552,0.668396022247182,0,0.404810701674894,0.876767573733936,0.395287777946524,3.53453448063988,0.425820255624806,0.178065603667255,0.488660878060728,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.948110273807448,0,0,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0.891844088010353,0.493647061806363,0.608929898229199,0.23467170806371,1.0591603543191,1.10264199027481,2.14352128823924,1.13025098687134,1.68876189798836,2.74556391207214,2.29797259643086,0.291480836629851,3.8939313422207,0.341741761595705,0.82554747185289,0.185194527369712,0,0,0.228778173206523,0.509935289981566,0.279902904647316,0.414599921413271,0,0.158167996790568,0.406638934253697,0.216010681643603,0.836353184057875,0.655087691238533,0.809186078308924,0.991841468704031,1.30877970992015,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0.0974578807397524,0,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.579568782096571,1.31377732815827,0.549454872801795,1.50057865355346,0.501572104035363,9.03602948187307,9.66682996665071,7.44764167471216,7.90524638780963,5.48066015816514,7.55393897389701,7.42524750254986,11.7083512838297,6.34399372577886,9.83744592328458,0.415149390336707,0.399024873401031,1.36586884603307,0.972426868273176,1.46729213839588,0,2.00022055021454,1.23621034343337,0.962757628775446,2.27427490587418,2.28131369901216,0.943131706930381,1.49826411951812,0.576226371643824,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0,0.883193520806384,1.37147700954166,0.70990322463735,0.953744759789284,1.45346416632329,0.941093804153306,0.930760686808441,1.28049581010941,0.789209134313529,1.08643291076689,1.68342681497322,1.42362021749009,1.47756723563345,0.818462086339379,1.39443157067369,0.771626443924566,1.99848462350357,1.63752125911786,1.50409737833809,0.57386499620653,0.441182838239031,0.695603506861264
|phase1_expression=0.640595388419176,0.348975407639361,0,0,1.00179145989269,0,0,0.258246646883153,0.985521055061667,0.234064526321993,0,0.159544317990673,0.171200729931206,0.262261207256992,0.333109761815663,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0,0,0,0.430942465371778,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,1.25896817975577,1.52065396829272,0.734187008646726,0.782391344348039,0.65407546914134,0,0.194429899074283,0.139986421625363,1.43752564364972,1.34226084846189,0,0.672187598284928,0,0.85960031981627,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,1.65903379693564,1.35005938331691,0.841299845405528,0.571301968807607,0.441737081903227,2.08234358665422,0.575072826109418,1.83843757322004,0,4.08599481872601,4.14737639791857,2.37395317914349,2.19570344645783,1.04182674111352,1.67509799400829,3.93933827022176,3.51435969886663,2.94628585473668,1.99320353118744,3.16879057903011,0.454357159999104,1.058001841495,0.869593466105033,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.823120949949934,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0.161766849947409,0,0.484875253135222,1.86391761218122,2.04946557908083,2.30391377494801,0.510914110417183,0.11981512450592,0,0.127070227073065,3.44518470631092,2.74500361691176,4.14659361972453,9.21268897019065,12.7857728665165,4.98691306942944,6.97637431191358,0.407357455401265,0.373220911830279,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0,0.753524089178575,0.612328492361951,1.0249097622788,0.937017245597288,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,0,0.702213187313235,0,0,0,0,0.540186184383045,0.473489471170421,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,0.492502392237286,0.729619285912702,0,0.219550115291051,1.07365135008297,9.67333763394985,6.89460902941206,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.380451252225118,1.42358718463353,0.164698954724011,0.754005626400808,0.397912944082302,0,0,0.432276099749388,0,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.442830443938806,0.31399745568275,0.740382983530803,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,1.47476983244164,0.172684981865896,1.01254341007058,0,1.63171705145613,0,0,4.33486592967038,4.33683240391152,0.491804836130026,0.252470927204373,1.57754109708128,0.390438744296638,1.50796378412959,0.238968797952552,0.668396022247182,0,0.404810701674894,0.876767573733936,0.395287777946524,3.53453448063988,0.425820255624806,0.178065603667255,0.488660878060728,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.948110273807448,0,0,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0.891844088010353,0.493647061806363,0.608929898229199,0.23467170806371,1.0591603543191,1.10264199027481,2.14352128823924,1.13025098687134,1.68876189798836,2.74556391207214,2.29797259643086,0.291480836629851,3.8939313422207,0.341741761595705,0.82554747185289,0.185194527369712,0,0,0.228778173206523,0.509935289981566,0.279902904647316,0.414599921413271,0,0.158167996790568,0.406638934253697,0.216010681643603,0.836353184057875,0.655087691238533,0.809186078308924,0.991841468704031,1.30877970992015,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0.0974578807397524,0,0.116876902181569,2.0405734525369,0,0.0897138566094757,0,0.579568782096571,1.31377732815827,0.549454872801795,1.50057865355346,0.501572104035363,9.03602948187307,9.66682996665071,7.44764167471216,7.90524638780963,5.48066015816514,7.55393897389701,7.42524750254986,11.7083512838297,6.34399372577886,9.83744592328458,0.415149390336707,0.399024873401031,1.36586884603307,0.972426868273176,1.46729213839588,0,2.00022055021454,1.23621034343337,0.962757628775446,2.27427490587418,2.28131369901216,0.943131706930381,1.49826411951812,0.576226371643824,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0,0.883193520806384,1.37147700954166,0.70990322463735,0.953744759789284,1.45346416632329,0.941093804153306,0.930760686808441,1.28049581010941,0.78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|short_description=p3@Wdr47
}}
}}

Latest revision as of 07:37, 27 September 2015

Short description:p3@Wdr47
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Wdr47_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 76bp_to_ENSMUST00000139626_5end
EntrezGene:Wdr47
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Wdr47

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.97e-0923
neuroblast (sensu Vertebrata)3.97e-0923

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.78e-2173
regional part of nervous system4.24e-2154
gray matter6.38e-2134
ectoderm-derived structure8.40e-2195
ectoderm8.40e-2195
presumptive ectoderm8.40e-2195
neural tube8.68e-2152
neural rod8.68e-2152
future spinal cord8.68e-2152
neural keel8.68e-2152
brain grey matter3.17e-2029
regional part of telencephalon3.17e-2029
telencephalon3.17e-2029
neurectoderm5.59e-2064
neural plate5.59e-2064
presumptive neural plate5.59e-2064
brain1.33e-1947
future brain1.33e-1947
central nervous system1.72e-1973
nervous system1.89e-1975
regional part of brain1.05e-1846
anterior neural tube1.40e-1640
regional part of forebrain1.01e-1539
forebrain1.01e-1539
future forebrain1.01e-1539
pre-chordal neural plate6.04e-1549
cerebral cortex1.04e-1321
cerebral hemisphere1.04e-1321
pallium1.04e-1321
occipital lobe1.30e-1210
visual cortex1.30e-1210
neocortex1.30e-1210
regional part of cerebral cortex1.81e-1217
structure with developmental contribution from neural crest3.56e-1192
basal ganglion9.05e-088
nuclear complex of neuraxis9.05e-088
aggregate regional part of brain9.05e-088
collection of basal ganglia9.05e-088
cerebral subcortex9.05e-088
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