FFCP PHASE1:Mm9::chr3:89197781..89197786,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:89197781..89197786,+
|short_description=p3@Gm15417
|description=CAGE_peak_3_at_Gm15417_5end
|association_with_transcript=-425bp_to_ENSMUST00000126926,NR_04...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545539 | |EntrezGene=545539 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-425bp_to_ENSMUST00000126926,NR_040404,uc008pzf.1_5end | |||
|cluster_id=chr3:89197781..89197786,+ | |||
|description=CAGE_peak_3_at_Gm15417_5end | |||
|id=chr3:89197781..89197786,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.13e-08!9;CL:0002251!5.13e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.66e-29,9;CL:0002251,6.66e-29,9;CL:0000239,6.83e-25,6;CL:0000677,6.83e-25,6;CL:0000584,6.83e-25,6;CL:0000075,2.90e-21,7;CL:0000066,3.45e-18,25;CL:0002076,6.86e-17,15;CL:0000223,1.43e-15,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.02e-10!15;UBERON:0001242!1.74e-09!13;UBERON:0000060!1.74e-09!13;UBERON:0001262!1.74e-09!13;UBERON:0004786!1.74e-09!13;UBERON:0004923!2.56e-08!24;UBERON:0000485!5.12e-08!11;UBERON:0003350!5.13e-08!9;UBERON:0004808!5.13e-08!9;UBERON:0001277!5.13e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.66e-29,9;UBERON:0004808,6.66e-29,9;UBERON:0001277,6.66e-29,9;UBERON:0001242,1.23e-24,13;UBERON:0001262,1.23e-24,13;UBERON:0004786,1.23e-24,13;UBERON:0000485,1.90e-23,11;UBERON:0000344,3.62e-21,15;UBERON:0004923,1.08e-12,24;UBERON:0000160,1.13e-11,31;UBERON:0005409,1.30e-08,47 | |||
|phase1_expression=0.160148847104794,4.18770489167233,4.09499315450582,6.95667686005709,14.0250804384977,4.02910252588535,2.33612640595526,0.129123323441576,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.91763712426868,2.29692785646008,1.7230479846363,0.646413698057667,0.760093677825496,0.504060259519861,1.55211357458713,1.27006134691926,0.61506478758457,0,3.46621943701529,0.997407872150954,4.28755648150975,0,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0.151143120213571,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,0.748953197024114,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0,0.689706313300419,0.180062129805349,0.452114453507145,0.136072998302656,1.0249097622788,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,0.51469581422943,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,0,0.205809224758569,0.330418782983798,1.32225283331772,0.213288250535234,0,0.38660238396628,0,0.667134131534611,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0.493588655687202,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0.586058432961016,0.163934945376675,0.504941854408746,0,1.56175497718655,0,0.955875191810208,1.11399337041197,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0.709360934569094,0,0.493647061806363,2.13125464380219,0,0.63549621259146,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0,0,0,0.619160603889667,0.185194527369712,0.376736914009382,0,0.457556346413045,0,0.279902904647316,0.138199973804424,0,0,0,0,0.836353184057875,0.218362563746178,0,0.165306911450672,0.785267825952089,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0.194915761479505,0,0,0,0.221985953374065,0.358855426437903,0.839423081820392,0,0,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,4.18770489167233,4.09499315450582,6.95667686005709,14.0250804384977,4.02910252588535,2.33612640595526,0.129123323441576,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.91763712426868,2.29692785646008,1.7230479846363,0.646413698057667,0.760093677825496,0.504060259519861,1.55211357458713,1.27006134691926,0.61506478758457,0,3.46621943701529,0.997407872150954,4.28755648150975,0,0,1.0470474879476,1.17646297606203,0,0.971020706062307,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0.151143120213571,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.83778682725382,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,0.748953197024114,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0,0.689706313300419,0.180062129805349,0.452114453507145,0.136072998302656,1.0249097622788,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,0.51469581422943,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,0,0.205809224758569,0.330418782983798,1.32225283331772,0.213288250535234,0,0.38660238396628,0,0.667134131534611,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0.493588655687202,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0,0.586058432961016,0.163934945376675,0.504941854408746,0,1.56175497718655,0,0.955875191810208,1.11399337041197,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0.709360934569094,0,0.493647061806363,2.13125464380219,0,0.63549621259146,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0,0,0,0.619160603889667,0.185194527369712,0.376736914009382,0,0.457556346413045,0,0.279902904647316,0.138199973804424,0,0,0,0,0.836353184057875,0.218362563746178,0,0.165306911450672,0.785267825952089,1.16653475962614,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0.194915761479505,0,0,0,0.221985953374065,0.358855426437903,0.839423081820392,0,0,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Gm15417 | |||
}} | }} |
Latest revision as of 20:37, 25 September 2015
Short description: | p3@Gm15417 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm15417_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | -425bp_to_ENSMUST00000126926, NR_040404, uc008pzf.1_5end |
EntrezGene: | Gm15417 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.66e-29 | 9 |
epithelial cell of alimentary canal | 6.66e-29 | 9 |
brush border epithelial cell | 6.83e-25 | 6 |
gut absorptive cell | 6.83e-25 | 6 |
enterocyte | 6.83e-25 | 6 |
columnar/cuboidal epithelial cell | 2.90e-21 | 7 |
epithelial cell | 3.45e-18 | 25 |
endo-epithelial cell | 6.86e-17 | 15 |
endodermal cell | 1.43e-15 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.66e-29 | 9 |
gastrointestinal system epithelium | 6.66e-29 | 9 |
intestinal epithelium | 6.66e-29 | 9 |
intestinal mucosa | 1.23e-24 | 13 |
wall of intestine | 1.23e-24 | 13 |
gastrointestinal system mucosa | 1.23e-24 | 13 |
simple columnar epithelium | 1.90e-23 | 11 |
mucosa | 3.62e-21 | 15 |
organ component layer | 1.08e-12 | 24 |
intestine | 1.13e-11 | 31 |
gastrointestinal system | 1.30e-08 | 47 |