FFCP PHASE1:Mm9::chr4:138010010..138010068,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:138010010..138010068,+
|short_description=p7@Camk2n1
|description=CAGE_peak_7_at_Camk2n1_5end
|association_with_transcript=-160bp_to_ENSMUST00000050918_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66259 | |EntrezGene=66259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QWF9 | |UniProt=Q6QWF9 | ||
|association_with_transcript=-160bp_to_ENSMUST00000050918_5end | |||
|cluster_id=chr4:138010010..138010068,+ | |||
|description=CAGE_peak_7_at_Camk2n1_5end | |||
|id=chr4:138010010..138010068,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.20e-07!23;CL:0000337!3.20e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p7@Camk2n1 | |||
}} | }} |
Latest revision as of 14:11, 26 September 2015
Short description: | p7@Camk2n1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -160bp_to_ENSMUST00000050918_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.48e-15 | 64 |
neural plate | 1.48e-15 | 64 |
presumptive neural plate | 1.48e-15 | 64 |
regional part of nervous system | 2.46e-14 | 54 |
structure with developmental contribution from neural crest | 2.55e-14 | 92 |
neural tube | 6.05e-13 | 52 |
neural rod | 6.05e-13 | 52 |
future spinal cord | 6.05e-13 | 52 |
neural keel | 6.05e-13 | 52 |
central nervous system | 9.56e-13 | 73 |
ecto-epithelium | 6.19e-12 | 73 |
ectoderm-derived structure | 7.02e-12 | 95 |
ectoderm | 7.02e-12 | 95 |
presumptive ectoderm | 7.02e-12 | 95 |
nervous system | 7.88e-12 | 75 |
pre-chordal neural plate | 2.18e-10 | 49 |
gray matter | 2.57e-10 | 34 |
brain | 3.07e-10 | 47 |
future brain | 3.07e-10 | 47 |
anatomical conduit | 6.02e-10 | 122 |
tube | 7.99e-10 | 114 |
regional part of brain | 1.31e-09 | 46 |
cavitated compound organ | 6.95e-09 | 21 |
anterior neural tube | 5.30e-08 | 40 |
occipital lobe | 7.98e-08 | 10 |
visual cortex | 7.98e-08 | 10 |
neocortex | 7.98e-08 | 10 |
brain grey matter | 1.47e-07 | 29 |
regional part of telencephalon | 1.47e-07 | 29 |
telencephalon | 1.47e-07 | 29 |
regional part of forebrain | 1.95e-07 | 39 |
forebrain | 1.95e-07 | 39 |
future forebrain | 1.95e-07 | 39 |