FFCP PHASE1:Mm9::chr4:138010818..138010832,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:138010818..138010832,+
|short_description=p6@Camk2n1
|description=CAGE_peak_6_at_Camk2n1_5end
|association_with_transcript=-230bp_to_NM_025451,uc008vkz.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66259 | |EntrezGene=66259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QWF9 | |UniProt=Q6QWF9 | ||
|association_with_transcript=-230bp_to_NM_025451,uc008vkz.2_5end | |||
|cluster_id=chr4:138010818..138010832,+ | |||
|description=CAGE_peak_6_at_Camk2n1_5end | |||
|id=chr4:138010818..138010832,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.40e-09!33;CL:0000047!4.40e-09!33;CL:0000031!4.40e-09!33;CL:0000404!4.40e-09!33;CL:0000393!1.10e-07!39;CL:0000211!1.10e-07!39;CL:0002321!1.87e-07!70;CL:0000220!1.87e-07!70;CL:0002319!7.66e-07!43;CL:0000221!8.15e-07!44;CL:0000133!8.15e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.03e-09,33;CL:0000047,1.03e-09,33;CL:0000031,1.03e-09,33;CL:0000404,1.03e-09,33;CL:0000393,3.29e-08,39;CL:0000211,3.29e-08,39;CL:0002321,4.57e-08,70;CL:0002319,5.23e-07,43;CL:0000221,5.56e-07,44;CL:0000133,5.56e-07,44;CL:0000117,5.76e-07,23;CL:0000337,5.76e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.22e-20!73;UBERON:0005743!3.22e-20!73;UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0004121!1.34e-16!102;UBERON:0000924!1.34e-16!102;UBERON:0006601!1.34e-16!102;UBERON:0001049!2.34e-15!52;UBERON:0005068!2.34e-15!52;UBERON:0006241!2.34e-15!52;UBERON:0007135!2.34e-15!52;UBERON:0000955!1.60e-14!50;UBERON:0006238!1.60e-14!50;UBERON:0002346!5.72e-14!71;UBERON:0003075!5.72e-14!71;UBERON:0007284!5.72e-14!71;UBERON:0002616!5.85e-14!49;UBERON:0000033!2.48e-13!63;UBERON:0002020!5.01e-12!34;UBERON:0004111!7.17e-12!122;UBERON:0000025!1.07e-11!114;UBERON:0003080!6.84e-11!40;UBERON:0002780!2.29e-10!39;UBERON:0001890!2.29e-10!39;UBERON:0006240!2.29e-10!39;UBERON:0002791!1.41e-09!29;UBERON:0003528!1.41e-09!29;UBERON:0001893!1.41e-09!29;UBERON:0003056!2.20e-09!49;UBERON:0000480!3.20e-08!308;UBERON:0000467!3.20e-08!308;UBERON:0002021!3.92e-08!10;UBERON:0000411!3.92e-08!10;UBERON:0001950!3.92e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-21,73;UBERON:0001016,2.78e-20,75;UBERON:0000073,1.84e-17,54;UBERON:0004121,1.18e-16,95;UBERON:0000924,1.18e-16,95;UBERON:0006601,1.18e-16,95;UBERON:0001049,3.18e-16,52;UBERON:0005068,3.18e-16,52;UBERON:0006241,3.18e-16,52;UBERON:0007135,3.18e-16,52;UBERON:0011216,9.46e-16,194;UBERON:0002346,5.40e-15,64;UBERON:0003075,5.40e-15,64;UBERON:0007284,5.40e-15,64;UBERON:0000955,1.43e-13,47;UBERON:0006238,1.43e-13,47;UBERON:0002616,5.38e-13,46;UBERON:0010371,6.11e-13,73;UBERON:0002020,7.40e-13,34;UBERON:0003080,1.69e-11,40;UBERON:0000025,5.93e-11,114;UBERON:0002780,6.07e-11,39;UBERON:0001890,6.07e-11,39;UBERON:0006240,6.07e-11,39;UBERON:0004111,6.73e-11,122;UBERON:0003528,2.95e-10,29;UBERON:0002791,2.95e-10,29;UBERON:0001893,2.95e-10,29;UBERON:0010314,2.98e-10,92;UBERON:0003056,2.21e-09,49;UBERON:0002021,1.65e-08,10;UBERON:0000411,1.65e-08,10;UBERON:0001950,1.65e-08,10;UBERON:0000956,7.82e-07,21;UBERON:0001869,7.82e-07,21;UBERON:0000203,7.82e-07,21;UBERON:0002619,9.40e-07,17 | |||
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|phase1_expression=3.84357233051505,5.23463111459042,7.27998783023258,6.35174843744343,12.0214975187123,9.9048770428015,7.47560449905682,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,34.2724459308811,0,0,5.75972722056264,4.5881856213434,5.16808767703518,10.3382879078178,6.46413698057667,11.7814520062952,9.07308467135751,4.21287970245079,0,0,0,2.02196133825892,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,1.09012578190223,2.41654801007919,1.36100929351998,0.839918529752175,0,0,0,0,4.3734104126111,2.29226751951005,4.64104883049698,3.64169629547276,6.34789175126439,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,2.17748185847803,2.16009501330705,1.05162480675691,21.4238238302853,25.6207507503872,1.5923803897944,1.34183659425531,0,20.9220173898839,48.0104391200306,37.6336006477797,5.40733779693795,5.6722339033494,3.64639359389732,24.0097379141188,48.3975844627245,35.2963952364431,14.4368006882097,16.3727432918968,7.45597783301202,0.984440513331393,1.28471652181535,2.6087803983151,5.16254326188832,3.39985666853875,4.31762553310254,5.19821133958135,7.6164570806547,7.8648875273781,0,0,0,1.83096445709685,0,0,0,3.030874574157,2.28023878927589,1.51657333504435,9.1347103775248,0.776813650941515,2.52351636410202,0.693941307064543,1.52232739156071,1.61430848079241,1.50722640552623,1.64624189989987,2.13633205260448,3.46072954828123,1.01219549843938,0,0.970601099684455,0.883366073841574,0.484875253135222,1.86391761218122,7.61230072230023,11.7290155815535,8.43008282188352,0,0,0,32.3547781114417,236.070311054411,5.90575454930463,274.294777263412,418.861919107081,47.7912502486988,119.40956961787,3.36069900706044,2.36373244159177,0.758168275301024,0.841767423545896,0.650602214813519,0.689706313300419,1.0803727788321,2.10986744970001,2.17716797284249,1.5373646434182,2.24884138943349,4.9153640440413,0,0,0.351902248327898,0.876782929710299,0,0.348252166522167,0.61734640922383,1.39323986772945,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0,0.196764231747404,0.771335564436891,0.697601834251224,1.07309360559848,0.350296027101508,0.16455984991348,1.97000956894914,2.10778904819225,2.48539978623065,1.75640092232841,1.61047702512446,61.4046649807252,4.52780294468852,9.91256348951394,2.11560453330835,0.639864751605702,0.928946687441754,0.77320476793256,1.4117846723634,3.11329261382818,2.47293313946327,6.16887780007865,5.43506550589236,5.7807098024062,9.94782360205754,5.65395852645448,11.6846523125049,4.75503709724327,8.76221602319216,1.51734320762465,0.456994050438915,2.25415471346161,1.62921062276251,3.29719228184964,2.66516115583211,4.55303067294652,10.6279306545314,5.33795674660674,5.55287237648102,6.52195779591728,0.500535317148282,0.982794975566015,0.674586337154561,2.23146133527353,0.964708639009667,0.763877555344259,2.30156909960649,4.37765112292595,4.94210543738547,17.2521847832825,6.69853705803306,7.48890415474945,6.06189307073068,5.02312757861354,4.3419916922703,2.40179147216586,0,0.325929952884052,1.01847051465113,0.704070744865506,0.335012514883631,3.33261097240419,4.09780660501378,3.31033802623001,3.5434350343804,4.62418829106713,3.93271955317771,1.38147985492716,4.19482269886384,0,0,0.491764273019036,1.93155722413313,22.7981837782665,25.5521476771003,0,0.757412781613119,5.67914794949262,5.46614242015294,7.75524231838076,4.77937595905104,3.56477878531831,2.83076530788832,5.66734982344852,7.01414058987149,5.53402889125133,32.7747742750243,1.27746076687442,1.42452482933804,2.11753047159649,2.47455184458803,2.65490276679926,1.21390318077491,1.51161778482376,0.377210159511796,1.18120757152309,0.922305443831782,1.55056975900933,2.18120237686503,1.78248689192361,1.26414703174326,1.05418608574999,0,3.74483566329167,1.26042765821917,0.517434735131018,1.28602221018955,5.14286677562593,4.10248280484762,2.96188237083818,3.34911444026059,1.17335854031855,1.48282449604674,1.32317038832977,1.6488625294148,0.968786560175433,0.482503399425247,1.07435109602823,1.96969079694074,9.03590593552537,25.9595422814714,0.512612642393558,1.23832120777933,0.740778109478847,0.565105371014073,0.546776910884101,0.457556346413045,0,0.279902904647316,0.138199973804424,4.77335309007557,0,0.203319467126849,1.18805874903981,2.71814784818809,1.52853794622324,2.15782954215713,2.97552440611209,2.87931536182433,8.42497326396654,4.97071450469541,1.69107881605257,0.897099276263873,0.165458490457098,0.388902376688095,0.645799117388655,0.337912250981556,0.938857909166032,0.651021924219751,0.629156066554265,0.966336483304024,0.576060012515731,0,0.810900861160657,0.308132871494482,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0,0.100826185136841,0.194915761479505,0,0.233753804363138,2.26730383615211,0,0.0897138566094757,0.167884616364078,2.89784391048286,1.31377732815827,1.28206136987086,0.857473516316263,0.501572104035363,270.516132613575,239.829448220239,233.168473969834,259.1545989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| ||
|short_description=p6@Camk2n1 | |||
}} | }} |
Latest revision as of 14:12, 26 September 2015
Short description: | p6@Camk2n1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -230bp_to_NM_025451, uc008vkz.2_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuron | 1.03e-09 | 33 |
neuronal stem cell | 1.03e-09 | 33 |
neuroblast | 1.03e-09 | 33 |
electrically signaling cell | 1.03e-09 | 33 |
electrically responsive cell | 3.29e-08 | 39 |
electrically active cell | 3.29e-08 | 39 |
embryonic cell | 4.57e-08 | 70 |
neural cell | 5.23e-07 | 43 |
ectodermal cell | 5.56e-07 | 44 |
neurectodermal cell | 5.56e-07 | 44 |
CNS neuron (sensu Vertebrata) | 5.76e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.76e-07 | 23 |