FFCP PHASE1:Mm9::chr6:78321824..78321831,+: Difference between revisions
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|id=chr6:78321824..78321831,+
|short_description=p@chr6:78321824..78321831,+
|description=CAGE_peak_at_chr6:78321824..78321831,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78321824..78321831,+ | |||
|description=CAGE_peak_at_chr6:78321824..78321831,+ | |||
|id=chr6:78321824..78321831,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.37e-15!6;CL:0000677!4.37e-15!6;CL:0000212!4.37e-15!6;CL:0000584!4.37e-15!6;CL:0000075!6.68e-13!7;CL:0000473!3.21e-12!3;CL:0000627!3.21e-12!3;CL:0000682!3.21e-12!3;CL:0002563!5.53e-10!9;CL:0002251!5.53e-10!9;CL:0000066!2.06e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.41e-21,6;CL:0000677,4.41e-21,6;CL:0000584,4.41e-21,6;CL:0000075,4.51e-18,7;CL:0000682,8.31e-17,3;CL:0002563,4.75e-14,9;CL:0002251,4.75e-14,9;CL:0000066,2.02e-12,25;CL:0002076,2.15e-08,15;CL:0000473,1.70e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.90e-27!15;UBERON:0000160!4.37e-24!43;UBERON:0001242!8.84e-22!13;UBERON:0000060!8.84e-22!13;UBERON:0001262!8.84e-22!13;UBERON:0004786!8.84e-22!13;UBERON:0005409!1.22e-16!59;UBERON:0004923!1.99e-16!24;UBERON:0000331!1.62e-12!3;UBERON:0002116!1.62e-12!3;UBERON:0001204!1.62e-12!3;UBERON:0001168!1.62e-12!3;UBERON:0003350!5.53e-10!9;UBERON:0004808!5.53e-10!9;UBERON:0001277!5.53e-10!9;UBERON:0001007!1.31e-08!128;UBERON:0001555!1.31e-08!128;UBERON:0007026!1.31e-08!128;UBERON:0004119!2.04e-08!130;UBERON:0000925!2.04e-08!130;UBERON:0006595!2.04e-08!130;UBERON:0000485!4.02e-08!11;UBERON:0002108!7.03e-08!16;UBERON:0001962!1.49e-07!2;UBERON:0001961!1.49e-07!2;UBERON:0001744!1.49e-07!2;UBERON:0004921!7.79e-07!126;UBERON:0004185!7.79e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.39e-25,13;UBERON:0001262,6.39e-25,13;UBERON:0004786,6.39e-25,13;UBERON:0000160,1.28e-22,31;UBERON:0000344,1.72e-21,15;UBERON:0000331,3.12e-17,3;UBERON:0002116,3.12e-17,3;UBERON:0001204,3.12e-17,3;UBERON:0001168,3.12e-17,3;UBERON:0005409,2.30e-14,47;UBERON:0003350,4.75e-14,9;UBERON:0004808,4.75e-14,9;UBERON:0001277,4.75e-14,9;UBERON:0004923,4.14e-13,24;UBERON:0002108,4.58e-13,4;UBERON:0000485,1.75e-11,11 | |||
|phase1_expression=0,1.39590163055744,3.18499467572675,2.11724947914781,1.50268718983904,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,4.01962374880514,3.4460959692726,1.939241094173,9.5011709728187,3.2763916868791,9.3126814475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.43785736662608,0,0,0,0,0,0,3.32170343081158,0,0,0,0,1.79763881730844,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,3.16255825724996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,3.18499467572675,2.11724947914781,1.50268718983904,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,4.01962374880514,3.4460959692726,1.939241094173,9.5011709728187,3.2763916868791,9.3126814475228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.43785736662608,0,0,0,0,0,0,3.32170343081158,0,0,0,0,1.79763881730844,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,3.16255825724996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78321824..78321831,+ | |||
}} | }} |
Latest revision as of 03:28, 6 August 2015
Short description: | p@chr6:78321824..78321831, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321824..78321831, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.41e-21 | 6 |
gut absorptive cell | 4.41e-21 | 6 |
enterocyte | 4.41e-21 | 6 |
columnar/cuboidal epithelial cell | 4.51e-18 | 7 |
M cell of gut | 8.31e-17 | 3 |
intestinal epithelial cell | 4.75e-14 | 9 |
epithelial cell of alimentary canal | 4.75e-14 | 9 |
epithelial cell | 2.02e-12 | 25 |
endo-epithelial cell | 2.15e-08 | 15 |
defensive cell | 1.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.39e-25 | 13 |
wall of intestine | 6.39e-25 | 13 |
gastrointestinal system mucosa | 6.39e-25 | 13 |
intestine | 1.28e-22 | 31 |
mucosa | 1.72e-21 | 15 |
ileal mucosa | 3.12e-17 | 3 |
ileum | 3.12e-17 | 3 |
mucosa of small intestine | 3.12e-17 | 3 |
wall of small intestine | 3.12e-17 | 3 |
gastrointestinal system | 2.30e-14 | 47 |
epithelium of mucosa | 4.75e-14 | 9 |
gastrointestinal system epithelium | 4.75e-14 | 9 |
intestinal epithelium | 4.75e-14 | 9 |
organ component layer | 4.14e-13 | 24 |
small intestine | 4.58e-13 | 4 |
simple columnar epithelium | 1.75e-11 | 11 |