FFCP PHASE1:Mm9::chr4:58219450..58219459,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=64817 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2405 | |MCL_coexpression_id=2405 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=A2AVA0 | ||
|association_with_transcript=8bp_to_ENSMUST00000042850,NM_022814,uc008syr.1,uc008sys.1,uc008syt.1,uc008syu.2_5end | |association_with_transcript=8bp_to_ENSMUST00000042850,NM_022814,uc008syr.1,uc008sys.1,uc008syt.1,uc008syu.2_5end | ||
|cluster_id=chr4:58219450..58219459,- | |cluster_id=chr4:58219450..58219459,- |
Latest revision as of 03:10, 27 September 2015
Short description: | p7@Svep1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Svep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2405 |
Association with transcript: | 8bp_to_ENSMUST00000042850, NM_022814, uc008syr.1, uc008sys.1, uc008syt.1, uc008syu.2_5end |
EntrezGene: | Svep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@Svep1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.93e-19 | 3 |
vascular associated smooth muscle cell | 3.93e-19 | 3 |
aortic smooth muscle cell | 3.93e-19 | 3 |
smooth muscle myoblast | 3.93e-19 | 3 |
muscle precursor cell | 7.51e-10 | 6 |
muscle cell | 7.51e-10 | 6 |
myoblast | 7.51e-10 | 6 |
mesodermal cell | 1.63e-08 | 7 |
natural helper lymphocyte | 8.26e-07 | 1 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.93e-19 | 3 |
blood vessel smooth muscle | 3.93e-19 | 3 |
arterial system smooth muscle | 3.93e-19 | 3 |
artery smooth muscle tissue | 3.93e-19 | 3 |
aorta smooth muscle tissue | 3.93e-19 | 3 |
aorta | 1.67e-14 | 4 |
artery | 1.67e-14 | 4 |
systemic artery | 1.67e-14 | 4 |
arterial blood vessel | 1.67e-14 | 4 |
systemic arterial system | 1.67e-14 | 4 |
Showing 1 to 10 of 26 entries