FFCP PHASE1:Mm9::chr8:116729490..116729542,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:116729490..116729542,+
|short_description=p1@Vat1l
|description=CAGE_peak_1_at_Vat1l_5end
|association_with_transcript=0bp_to_ENSMUST00000049509,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=270097 | |EntrezGene=270097 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=Q80TB8,D3Z434 | |UniProt=Q80TB8,D3Z434 | ||
|association_with_transcript=0bp_to_ENSMUST00000049509,ENSMUST00000142591,ENSMUST00000150963,NM_173016,uc009noa.1_5end | |||
|cluster_id=chr8:116729490..116729542,+ | |||
|description=CAGE_peak_1_at_Vat1l_5end | |||
|id=chr8:116729490..116729542,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.06e-19!43;CL:0000221!5.90e-19!44;CL:0000133!5.90e-19!44;CL:0000540!1.01e-16!33;CL:0000047!1.01e-16!33;CL:0000031!1.01e-16!33;CL:0000404!1.01e-16!33;CL:0000055!5.06e-13!50;CL:0000117!5.46e-13!23;CL:0000337!5.46e-13!23;CL:0000393!2.90e-11!39;CL:0000211!2.90e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.46e-20,43;CL:0000221,4.05e-20,44;CL:0000133,4.05e-20,44;CL:0000540,3.52e-18,33;CL:0000047,3.52e-18,33;CL:0000031,3.52e-18,33;CL:0000404,3.52e-18,33;CL:0000117,4.35e-14,23;CL:0000337,4.35e-14,23;CL:0000393,9.24e-13,39;CL:0000211,9.24e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.54e-38!102;UBERON:0000924!4.54e-38!102;UBERON:0006601!4.54e-38!102;UBERON:0000073!6.66e-37!75;UBERON:0001016!6.66e-37!75;UBERON:0001017!5.83e-36!73;UBERON:0005743!5.83e-36!73;UBERON:0002346!6.22e-33!71;UBERON:0003075!6.22e-33!71;UBERON:0007284!6.22e-33!71;UBERON:0001049!1.48e-25!52;UBERON:0005068!1.48e-25!52;UBERON:0006241!1.48e-25!52;UBERON:0007135!1.48e-25!52;UBERON:0000033!5.67e-25!63;UBERON:0000955!1.80e-23!50;UBERON:0006238!1.80e-23!50;UBERON:0002616!3.84e-23!49;UBERON:0003056!4.54e-22!49;UBERON:0003080!7.25e-19!40;UBERON:0002780!3.37e-18!39;UBERON:0001890!3.37e-18!39;UBERON:0006240!3.37e-18!39;UBERON:0002020!3.74e-18!34;UBERON:0002791!1.47e-14!29;UBERON:0003528!1.47e-14!29;UBERON:0001893!1.47e-14!29;UBERON:0000153!1.04e-11!94;UBERON:0007811!1.49e-11!86;UBERON:0000956!1.40e-09!21;UBERON:0001869!1.40e-09!21;UBERON:0000203!1.40e-09!21;UBERON:0002619!1.90e-09!17;UBERON:0000468!2.08e-08!333;UBERON:0003076!3.06e-07!12;UBERON:0003057!3.06e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.77e-40,75;UBERON:0001017,1.05e-38,73;UBERON:0004121,2.46e-36,95;UBERON:0000924,2.46e-36,95;UBERON:0006601,2.46e-36,95;UBERON:0002346,9.88e-33,64;UBERON:0003075,9.88e-33,64;UBERON:0007284,9.88e-33,64;UBERON:0000073,6.68e-29,54;UBERON:0010371,1.69e-27,73;UBERON:0001049,2.60e-27,52;UBERON:0005068,2.60e-27,52;UBERON:0006241,2.60e-27,52;UBERON:0007135,2.60e-27,52;UBERON:0003056,4.79e-24,49;UBERON:0000955,1.03e-22,47;UBERON:0006238,1.03e-22,47;UBERON:0002616,2.34e-22,46;UBERON:0010314,5.45e-21,92;UBERON:0003080,1.56e-20,40;UBERON:0002780,8.43e-20,39;UBERON:0001890,8.43e-20,39;UBERON:0006240,8.43e-20,39;UBERON:0002020,9.46e-20,34;UBERON:0003528,8.29e-16,29;UBERON:0002791,8.29e-16,29;UBERON:0001893,8.29e-16,29;UBERON:0000956,2.36e-10,21;UBERON:0001869,2.36e-10,21;UBERON:0000203,2.36e-10,21;UBERON:0002619,3.32e-10,17;UBERON:0003076,2.96e-07,12;UBERON:0003057,2.96e-07,12;UBERON:0002420,7.11e-07,8;UBERON:0007245,7.11e-07,8;UBERON:0010009,7.11e-07,8;UBERON:0010011,7.11e-07,8;UBERON:0000454,7.11e-07,8;UBERON:0002021,8.51e-07,10;UBERON:0000411,8.51e-07,10;UBERON:0001950,8.51e-07,10 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71841992193451,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.57852828398938,28.7788899382158,64.9395862908107,6.7193482380174,14.3752564364972,0,0,0,0,0.286533439938757,0,36.0123300330084,49.1961610722991,40.5652098243955,0.338844532069132,0,0.449949858640699,0,0,10.7856039786626,6.14749288514487,3.11068836925433,5.53524347159932,3.78584930432488,144.253747123921,127.220279588129,10.779190330916,11.2139201091337,22.9804696652505,69.3730050296149,50.8195605579047,77.7249058276592,54.4690368325701,65.4136651757229,48.9658568323354,90.4552916764474,98.483456755544,104.514001479338,109.012576625257,106.778760599327,54.0558392893372,9.46577416664801,20.5554643490457,0,0,0,0,0,0,3.23022166303029,0,0,0,3.80277233397037,0,0,0,0,0,0,0.91347103775248,0.517875767294343,11.2816025689267,10.0621489524359,15.5277393939192,8.30215790121811,11.3041980414467,12.8171690777918,5.78066320116507,0,16.4843266888699,0,1.29413479957927,0.883366073841574,1.93950101254089,1.86391761218122,45.3810235367898,46.2877222057736,0.766371165625774,0,0,0,55.5723272191892,48.952564501593,18.9738071690425,18.251553620189,16.8772201838018,60.466320966832,50.4570328140726,2.34230536855727,0.248813941220186,0,12.416069497302,8.06746746368763,10.1156925950728,12.0641626969584,9.64510834148576,9.59314638033723,13.1957131893395,15.8355914505942,26.1290404446406,1.5089759505299,5.48407632486676,4.04687585577082,2.84954452155847,1.94633074457919,3.48252166522167,3.2925141825271,0.796137067273973,0,0,0,1.44988040774851,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.925602677324269,0,0,0.233530684734339,0.329119699826961,0,0.405344047729279,0.292399974850665,0.439100230582101,0,17.0334858336943,21.3012547625119,0,0.528901133327089,2.55945900642281,2.32236671860439,4.89696353023955,2.42020229548011,1.55664630691409,3.04361001780095,0.949058123089023,1.64698954724011,2.01068167040216,4.57599885694647,2.53453313254856,0,0.648414149624083,1.59313018603494,7.39704813717019,4.79843752960861,4.50830942692322,2.03651327845314,1.74557238450863,1.26244475802573,0.126473074248515,0,0,0,0,0.500535317148282,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,3.22135400009824,0.488894929326078,0.339490171550376,0.469380496577004,0.670025029767263,0.952174563544055,0.780534591431195,0.157635144106191,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,69.5184054647139,64.2320042525273,0,1.00988370881749,12.9358369960665,16.3984272604588,16.8030250231583,16.2498782607735,21.3886727119098,17.2676683781188,16.1924280669958,21.3346776275258,21.3455400091123,10.6036034419196,0,1.42452482933804,2.44330439030364,0,1.32745138339963,1.94224508923985,3.62788268357701,2.26326095707078,2.95301892880773,3.07435147943927,4.9101375701962,5.08947221268508,3.56497378384721,2.52829406348653,0,1.03135543248187,11.234506989875,9.72329907769075,13.0652270620582,16.5039516974326,13.6551979904551,11.2372355089304,8.72109809191241,6.39376393140658,0.704015124191131,0,11.688005096913,0.98931751764888,0.807322133479528,0.482503399425247,2.14870219205646,2.1338316966858,0.874442509889552,76.024373824309,0,0.412773735926445,0,0,0,0,0,0,0,0,4.27053591334533,4.26970880966382,2.48412283890143,2.71814784818809,3.27543845619266,2.56242258131159,4.79390043206948,1.30877970992015,1.42576470620972,0,0,1.19613236835183,0.165458490457098,0.777804753376191,1.42075805825504,0.675824501963113,0.821500670520278,0.651021924219751,0.629156066554265,0,0.288030006257865,0,2.02725215290164,0.513554785824136,0.25984164595559,1.07416017400489,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0.443971906748129,0,0,10.0458588896739,0.375364950902364,0,0.643105137237198,0,22.0253218620656,25.7782132444019,22.9158205375759,20.4505286988988,26.0331357512844,21.9064230243013,22.2757425076496,23.8670237708837,17.672553950384,17.0860902878101,6.2272408550506,4.78829848081237,8.70741389346084,6.56388136084394,11.1094976192831,7.90527086335061,8.66762238426299,9.68364769022803,8.66481865897901,7.32821914115013,9.88569269571935,7.1678009726709,8.80230170216895,9.34767225111091,7.06456268154043,8.57328644309533,10.0819363572024,8.87382414133043,5.35711671044299,10.3039244094078,7.54312355247914,6.21165321557681,8.10683045820891,8.57543858130738,8.37573485696442,7.36147088657586,5.67076715905595,6.57674278594607,8.69146328613515,8.97827634652382,6.99946606932627,6.40279135441163,8.18462086339379,6.35241048862461,7.9091710502268,18.2361721894701,6.78401664491684,7.73535794573874,9.56441660344217,6.39715115446595,10.8977882741598 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| ||
|short_description=p1@Vat1l | |||
}} | }} |
Latest revision as of 13:36, 1 October 2015
Short description: | p1@Vat1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vat1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000049509, ENSMUST00000142591, ENSMUST00000150963, NM_173016, uc009noa.1_5end |
EntrezGene: | Vat1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.46e-20 | 43 |
ectodermal cell | 4.05e-20 | 44 |
neurectodermal cell | 4.05e-20 | 44 |
neuron | 3.52e-18 | 33 |
neuronal stem cell | 3.52e-18 | 33 |
neuroblast | 3.52e-18 | 33 |
electrically signaling cell | 3.52e-18 | 33 |
CNS neuron (sensu Vertebrata) | 4.35e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-14 | 23 |
electrically responsive cell | 9.24e-13 | 39 |
electrically active cell | 9.24e-13 | 39 |