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FFCP PHASE1:Mm9::chr8:125935444..125935462,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:125935444..125935462,+ |short_description=p1@Tubb3 |description=CAGE_peak_1_at_Tubb3_5end |association_with_transcript=-1bp_to_NM_023279,uc009nvt.1_5end |...")
 
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{{FFCP
{{FFCP
|id=chr8:125935444..125935462,+
|DHSsupport=NA
|short_description=p1@Tubb3
|DPIdataset=NA
|description=CAGE_peak_1_at_Tubb3_5end
|association_with_transcript=-1bp_to_NM_023279,uc009nvt.1_5end
|EntrezGene=22152
|EntrezGene=22152
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9ERD7,Q3UMM1
|UniProt=Q9ERD7,Q3UMM1
|association_with_transcript=-1bp_to_NM_023279,uc009nvt.1_5end
|cluster_id=chr8:125935444..125935462,+
|description=CAGE_peak_1_at_Tubb3_5end
|id=chr8:125935444..125935462,+
|ontology_enrichment_celltype=CL:0000540!1.47e-18!33;CL:0000047!1.47e-18!33;CL:0000031!1.47e-18!33;CL:0000404!1.47e-18!33;CL:0000393!3.25e-16!39;CL:0000211!3.25e-16!39;CL:0002319!7.27e-16!43;CL:0000221!7.98e-16!44;CL:0000133!7.98e-16!44;CL:0000117!1.92e-15!23;CL:0000337!1.92e-15!23;CL:0000055!1.17e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.03e-19,33;CL:0000047,9.03e-19,33;CL:0000031,9.03e-19,33;CL:0000404,9.03e-19,33;CL:0000393,3.65e-16,39;CL:0000211,3.65e-16,39;CL:0002319,4.84e-16,43;CL:0000221,5.32e-16,44;CL:0000133,5.32e-16,44;CL:0000117,1.29e-15,23;CL:0000337,1.29e-15,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.70e-29,75;UBERON:0001017,2.79e-29,73;UBERON:0004121,7.86e-29,95;UBERON:0000924,7.86e-29,95;UBERON:0006601,7.86e-29,95;UBERON:0002346,2.43e-25,64;UBERON:0003075,2.43e-25,64;UBERON:0007284,2.43e-25,64;UBERON:0000073,2.63e-22,54;UBERON:0010371,4.44e-22,73;UBERON:0001049,2.76e-21,52;UBERON:0005068,2.76e-21,52;UBERON:0006241,2.76e-21,52;UBERON:0007135,2.76e-21,52;UBERON:0003056,9.65e-19,49;UBERON:0010314,1.07e-18,92;UBERON:0000955,6.66e-18,47;UBERON:0006238,6.66e-18,47;UBERON:0002020,1.72e-17,34;UBERON:0002616,2.13e-17,46;UBERON:0003080,2.35e-16,40;UBERON:0002780,7.92e-16,39;UBERON:0001890,7.92e-16,39;UBERON:0006240,7.92e-16,39;UBERON:0003528,2.73e-14,29;UBERON:0002791,2.73e-14,29;UBERON:0001893,2.73e-14,29;UBERON:0000956,9.18e-10,21;UBERON:0001869,9.18e-10,21;UBERON:0000203,9.18e-10,21;UBERON:0002619,1.80e-07,17
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918,17.8717065466799,16.6298653411578,23.0944437411051,22.0536303807204,12.6205221995967,12.9966783913628,7.87538309595551,7.62068066549998,5.14213544197887,5.45764132142614,5.38786313185845,5.49321440253374,25.6205333485189,5.54964883435162,3.85769583420746,23.6717309073351,22.6031825017663,0.187682475451182,0.73260649706906,45.446096364762,0.501572104035363,460.272751732909,440.991576573875,453.160351130563,451.286456834524,255.53577987445,263.632470189005,261.233707589709,308.920345411815,269.619733345602,265.611039928684,300.256796561023,370.295082516157,410.272854627184,145.620923523908,334.54260755426,233.297412223068,239.137479114538,226.844598020023,262.832832655697,262.552403022586,225.596576902313,256.531824285064,220.338467076633,206.865267420133,204.240527606161,190.517476513229,167.684619642206,188.665217613504,173.900250138995,227.716729447913,209.835982459874,179.60551583325,177.634961510754,195.490930370482,167.608806519704,173.713790001612,229.57460595533,220.452418184912,229.644756513352,198.644364166839,254.709383912602,225.870778087167,126.452392339434,166.712041116099,165.899685443782,696.971512446869,188.782808015445,165.880453725286,82.6365594537403,54.2654891034008,45.4460957816026
|phase1_expression=24.8230713012431,0,0.454999239389536,0.60492842261366,3.00537437967808,0.839396359559449,1.86890112476421,0.129123323441576,4.22366166455,1.40438715793196,0,0.478632953972018,0.856003649656029,0.34968160967599,0.666219523631325,1.61980213911861,0.699561878128147,0.473193248037357,0.548457734422955,0,64.9730736754173,51.4327127220586,62.4267496042056,0.319984845586813,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0.886922042621219,37.4668097341182,22.1423323530445,0,0,0.166234645358492,0.204169356262369,0,0,1.0470474879476,0,0,0,2.14024590558481,0.912392380975631,10.8292583775392,3.9119567217402,24.6368426709905,8.12838876117546,2.52758868796568,3.77963338388479,5.75010257459886,1.00669563634642,0.725362142011344,3.6970317905671,71.0036043459214,23.4957420749781,30.4246534443691,2145.36375095517,2878.23991821913,2262.77811051706,25.4133399051849,3.55717918444456,2.6996991518442,1.97773272513395,2.8419204597844,68.0092250876779,65.3171119046643,1459.32760362951,1775.1930831234,1551.98788981185,998.635841475697,1010.69444339458,1917.59346171011,1276.0866011368,1823.73007263428,271.98622606849,393.149313964293,455.443371104762,2771.45845036229,1893.06232142106,2310.77171178979,667.2473676133,351.7266312698,360.603864753272,836.745182745216,828.033695527583,1551.02978871233,27.0342510199467,134.744091670399,0.289864488701678,0.860423876981386,0.679971333707751,3.2382191498269,0.649776417447669,0,28.9315505471409,0.340860645156116,0.259786004602869,1.06001872353102,27.323623436676,0,0,0,0.216491041011214,0,0,10.2765491747154,1.8125651855302,12.6175818205101,103.917710732915,186.028407248718,122.918060037479,124.346178455914,105.12430417932,4.02133092254962,12.1125534189843,3.7595832799177,0,2.75003644910596,1.98757366614354,0.969750506270444,9.31958806090611,180.645751756125,167.557365450764,3.83185582812887,1.07833612055328,1.19980546198682,1.27070227073065,368.934344854078,205.875271268382,1304.66913798787,290.286614721102,314.274297058976,455.471393674556,361.7980166411,2.13862664085664,1.36847667671102,0,9.6803253707778,113.855387592366,584.411149469888,503.093590676146,257.855943316908,186.692153671244,199.729289924081,197.710638821028,55.1038179674103,9.7005596819779,6.99692496620931,3.16712023495108,0.657587197282725,2.50242524303038,2.089512999133,3.08673204611915,2.7864797354589,1.40442637462647,1.02939162845886,1.13665399758237,11.1847917169171,7.50483391939508,5.58192390529146,3.78791576936336,1.37734962223183,1.3884040159864,0.697601834251224,1.3413670069981,1.75148013550754,3.12663714835613,1.97000956894914,1.29710095273369,1.60819986167866,2.19550115291051,2.01309628140558,191.994723039048,1343.00809616204,0.330418782983798,3.70230793328962,31.5666610792146,54.1111445434822,49.3562376863617,36.3030344322017,24.2392067790909,32.7188076913602,6.16887780007865,24.0460473897056,16.8394589896181,20.0946036761562,15.7920910566487,8.98819408654222,3.8904848977445,5.97423819763102,5.12103332573321,25.1346727741403,2.25415471346161,4.68398054044223,6.40043207653165,5.75113723100612,0.505892296994058,0,0.156998727841375,0,0,0.667380422864376,3.53806191203765,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.739012760666419,24.4443921183925,2.93336957595647,4.92260748748046,1.40814148973101,3.51763140627813,3.09456733151818,1.56106918286239,0.788175720530955,1.10732344824387,0.797273843287435,0.81931657357869,1.89953480052485,0.433947175744535,0,0,0.983528546038072,0,578.303225136027,571.40697213699,1.47541450839008,0.504941854408746,262.502838554326,245.195531418289,314.949007485352,183.289068029607,284.068309455052,223.913535853966,229.93247855134,348.368982630284,296.861121237839,318.429424574011,14.4778886912434,3.73937767701236,0.488660878060728,0.659880491890142,1.32745138339963,20.6363540731734,10.883648050731,10.9390946258421,21.5570381802964,11.3751004739253,11.62927319257,6.90714086007261,5.70395805415554,4.42451461110142,2.10837217149998,1.03135543248187,34.7248397868864,95.2523187425631,68.9481784562082,48.868843987203,20.3941268688615,131.457818572726,154.182432304187,181.765574621416,20.1817668934791,104.856875077591,45.8699067954321,8.57408515295696,2.58343082713449,9.22787751400785,23.7550964566242,28.0680938564055,8.74442509889552,637.306763010122,2.05045056957423,0.412773735926445,0.370389054739423,1.13021074202815,0.410082683163076,0.457556346413045,1.18984900995699,0.839708713941948,0.829199842826543,6.68269432610579,50.4555909761911,46.5601579720484,33.5896609955802,34.0813922503584,26.2035076495413,19.8250589185686,17.5225326137712,10.2084817373772,7.12882353104861,3.10669656543463,65.9520738260503,8.82147621659475,16.5458490457098,12.444876054019,18.3406949338378,12.164841035336,15.256441023948,29.8168041292646,89.4450207951314,65.9524649854997,40.3242008761012,4.4241556887945,26.9624536335918,17.8717065466799,16.6298653411578,23.0944437411051,22.0536303807204,12.6205221995967,12.9966783913628,7.87538309595551,7.62068066549998,5.14213544197887,5.45764132142614,5.38786313185845,5.49321440253374,25.6205333485189,5.54964883435162,3.85769583420746,23.6717309073351,22.6031825017663,0.187682475451182,0.73260649706906,45.446096364762,0.501572104035363,460.272751732909,440.991576573875,453.160351130563,451.286456834524,255.53577987445,263.632470189005,261.233707589709,308.920345411815,269.619733345602,265.611039928684,300.256796561023,370.295082516157,410.272854627184,145.620923523908,334.54260755426,233.297412223068,239.137479114538,226.844598020023,262.832832655697,262.552403022586,225.596576902313,256.531824285064,220.338467076633,206.865267420133,204.240527606161,190.517476513229,167.684619642206,188.665217613504,173.900250138995,227.716729447913,209.835982459874,179.60551583325,177.634961510754,195.490930370482,167.608806519704,173.713790001612,229.57460595533,220.452418184912,229.644756513352,198.644364166839,254.709383912602,225.870778087167,126.452392339434,166.712041116099,165.899685443782,696.971512446869,188.782808015445,165.880453725286,82.6365594537403,54.2654891034008,45.4460957816026
|short_description=p1@Tubb3
}}
}}

Latest revision as of 16:53, 1 October 2015

Short description:p1@Tubb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tubb3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -1bp_to_NM_023279, uc009nvt.1_5end
EntrezGene:Tubb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tubb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A364.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H251.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I962.43
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.83
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C224.64
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C171.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C32145.36
Mouse Granule cells, donor2.CNhs12357.11731-123E32878.24
Mouse Granule cells, donor3.CNhs12108.11636-122C72262.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C868.01
Mouse Microglia, donor2.CNhs12634.11736-123E865.32
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51459.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51775.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91551.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1998.64
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51010.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21917.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21276.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61823.73
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3271.99
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3393.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7455.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42771.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41893.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82310.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4667.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5351.73
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6360.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6836.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6828.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11551.03
Mouse Schwann, donor1.CNhs12507.11728-123D927.03
Mouse Schwann, donor2.CNhs12573.11746-123F9134.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.28
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C5103.92
adrenal gland, embryo E16.CNhs11004.1254-43D6186.03
adrenal gland, embryo E17.CNhs11043.1263-45I1122.92
adrenal gland, embryo E18.CNhs11026.1262-18F5124.35
adrenal gland, neonate N00.CNhs11191.1311-23C1105.12
adrenal gland, neonate N25.CNhs11223.1377-27I34.02
amnion, adult pregnant day17.5.CNhs10488.583-22A812.11
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B2180.65
cerebellum, neonate N30.CNhs11135.1395-42I2167.56
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A4368.93
corpus striatum, adult.CNhs10487.19-21D8205.88
corpus striatum, neonate N00.CNhs11226.630-43F11304.67
cortex, adult.CNhs10473.12-14D5290.29
cortex, neonate N30.CNhs11107.1392-42F2314.27
diencephalon, adult.CNhs10482.20-12F2455.47
diencephalon, neonate N30.CNhs11201.1388-42B2361.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C6113.86
eyeball, embryo E14.CNhs10521.399-16E2584.41
eyeball, embryo E15.CNhs10593.426-16C9503.09
eyeball, embryo E17.CNhs11023.1261-18D4257.86
eyeball, neonate N00.CNhs11207.633-15C6186.69
eyeball, neonate N01.CNhs11140.1532-43E7199.73
eyeball, neonate N02.CNhs11205.1551-44G8197.71
eyeball, neonate N16.CNhs11188.777-19A255.10
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E911.18
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E8191.99
hippocampus, neonate N00.CNhs11228.627-43G11343.01
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I531.57
intestine, embryo E13.CNhs11010.381-16D554.11
intestine, embryo E15.CNhs10602.976-16D849.36
intestine, embryo E16.CNhs10585.463-22H436.30
intestine, embryo E17.CNhs10582.482-18D324.24
intestine, embryo E18.CNhs10526.1289-20F732.72
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A515.79
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F825.13
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G75.75
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G224.44
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2578.30
medulla oblongata, neonate N30.CNhs11200.1396-42A3571.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1262.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2245.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3314.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7183.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8284.07
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9223.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4229.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5348.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6296.86
olfactory brain, adult.CNhs10489.18-22I9318.43
ovary, adult.CNhs10507.91-2I714.48
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F420.64
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E510.94
pancreas, embryo E17.CNhs10599.1558-45G321.56
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G834.72
pituitary gland, embryo E12.CNhs11018.346-16E695.25
pituitary gland, embryo E13.CNhs11009.370-44C768.95
pituitary gland, embryo E14.CNhs11037.398-44A548.87
pituitary gland, embryo E15.CNhs10592.427-16B920.39
pituitary gland, embryo E16.CNhs11036.449-43F6131.46
pituitary gland, embryo E17.CNhs11039.1265-44F5154.18
pituitary gland, neonate N00.CNhs11190.1308-22E9181.77
placenta, adult pregnant day10.CNhs10472.539-13I720.18
placenta, adult pregnant day17.CNhs10464.577-18G3104.86
prostate, adult.CNhs10470.859-1F845.87
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H39.23
skin, neonate N06.CNhs11097.693-20I523.76
skin, neonate N10.CNhs11108.762-6C428.07
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C9637.31
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E350.46
stomach, embryo E15.CNhs10603.1252-16G846.56
stomach, embryo E16.CNhs11022.459-17D433.59
stomach, embryo E17.CNhs11006.1035-18D534.08
stomach, embryo E18.CNhs10999.1286-20C626.20
stomach, neonate N03.CNhs11193.1340-24B819.83
stomach, neonate N07.CNhs11210.718-18A917.52
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G565.95
testis, embryo E13.CNhs11031.389-23F58.82
testis, embryo E15.CNhs11034.443-27C516.55
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I518.34
testis, embryo E18.CNhs11027.503-18G512.16
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I429.82
testis, neonate N10.CNhs11204.763-44D989.45
testis, neonate N20.CNhs11110.839-18H365.95
testis, neonate N30.CNhs11130.1391-42E240.32
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I426.96
thymus, embryo E15.CNhs11005.430-45I217.87
thymus, embryo E16.CNhs11002.456-26C516.63
thymus, embryo E17.CNhs10581.478-18C123.09
thymus, embryo E18.CNhs10595.1273-19G422.05
thymus, neonate N02.CNhs11181.1541-43F812.62
thymus, neonate N03.CNhs11137.2104-43C713.00
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A25.46
thymus, neonate N25.CNhs11125.1362-25G75.39
thymus, neonate N30.CNhs11132.1393-42G25.49
tongue, adult.CNhs10499.32-1B425.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.67
urinary bladder, adult.CNhs10481.879-12E422.60
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D545.45
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1460.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2440.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3453.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7451.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4255.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5263.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6261.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7308.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8269.62
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9265.61
whole body, embryo E11.CNhs11014.324-5I8300.26
whole body, embryo E12.CNhs10587.857-27C9370.30
whole body, embryo E13.CNhs10512.372-23H2410.27
whole body, embryo E14.5.CNhs10578.420-27D2145.62
whole body, embryo E14.CNhs10519.395-14B1334.54
whole body, embryo E16.CNhs10514.453-14F2233.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5239.14
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5226.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5262.83
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5262.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5225.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5256.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5220.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5206.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5204.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5190.52
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5167.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5188.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5173.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5227.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5209.84
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5179.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5177.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5195.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5167.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5173.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5229.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5220.45
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5229.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5198.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5254.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5225.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5126.45
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5166.71
whole body, embryo E17.5.CNhs10513.490-9F9165.90
whole body, embryo E17.CNhs10517.475-3I5696.97
whole body, embryo E18.CNhs10516.493-3B3188.78
whole body, neonate N00.CNhs10525.657-19C2165.88
whole body, neonate N01.CNhs10576.659-23C682.64
whole body, neonate N06.CNhs10515.692-21D154.27
whole body, neonate N10.CNhs10518.761-6B445.45





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.03e-1933
neuronal stem cell9.03e-1933
neuroblast9.03e-1933
electrically signaling cell9.03e-1933
electrically responsive cell3.65e-1639
electrically active cell3.65e-1639
neural cell4.84e-1643
ectodermal cell5.32e-1644
neurectodermal cell5.32e-1644
CNS neuron (sensu Vertebrata)1.29e-1523
neuroblast (sensu Vertebrata)1.29e-1523

Uber anatomy
Ontology termp-valuen
nervous system1.70e-2975
central nervous system2.79e-2973
ectoderm-derived structure7.86e-2995
ectoderm7.86e-2995
presumptive ectoderm7.86e-2995
neurectoderm2.43e-2564
neural plate2.43e-2564
presumptive neural plate2.43e-2564
regional part of nervous system2.63e-2254
ecto-epithelium4.44e-2273
neural tube2.76e-2152
neural rod2.76e-2152
future spinal cord2.76e-2152
neural keel2.76e-2152
pre-chordal neural plate9.65e-1949
structure with developmental contribution from neural crest1.07e-1892
brain6.66e-1847
future brain6.66e-1847
gray matter1.72e-1734
regional part of brain2.13e-1746
anterior neural tube2.35e-1640
regional part of forebrain7.92e-1639
forebrain7.92e-1639
future forebrain7.92e-1639
brain grey matter2.73e-1429
regional part of telencephalon2.73e-1429
telencephalon2.73e-1429
cerebral cortex9.18e-1021
cerebral hemisphere9.18e-1021
pallium9.18e-1021
regional part of cerebral cortex1.80e-0717
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