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FFCP PHASE1:Mm9::chr8:63433523..63433587,-: Difference between revisions

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(Created page with "{{FFCP |id=chr8:63433523..63433587,- |short_description=p2@Clcn3 |description=CAGE_peak_2_at_Clcn3_5end |association_with_transcript=0bp_to_ENSMUST00000110302,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr8:63433523..63433587,-
|DHSsupport=NA
|short_description=p2@Clcn3
|DPIdataset=NA
|description=CAGE_peak_2_at_Clcn3_5end
|association_with_transcript=0bp_to_ENSMUST00000110302,ENSMUST00000132234_5end
|EntrezGene=12725
|EntrezGene=12725
|HGNC=
|HGNC=
|MCL_coexpression_id=704
|TSSclassifier=NA
|UniProt=E9Q2I1
|UniProt=E9Q2I1
|association_with_transcript=0bp_to_ENSMUST00000110302,ENSMUST00000132234_5end
|cluster_id=chr8:63433523..63433587,-
|description=CAGE_peak_2_at_Clcn3_5end
|id=chr8:63433523..63433587,-
|ontology_enrichment_celltype=CL:0000540!4.30e-11!33;CL:0000047!4.30e-11!33;CL:0000031!4.30e-11!33;CL:0000404!4.30e-11!33;CL:0000393!3.66e-10!39;CL:0000211!3.66e-10!39;CL:0000221!1.38e-09!44;CL:0000133!1.38e-09!44;CL:0002319!1.43e-09!43;CL:0000117!1.15e-08!23;CL:0000337!1.15e-08!23;CL:0000055!2.60e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.81e-11,33;CL:0000047,3.81e-11,33;CL:0000031,3.81e-11,33;CL:0000404,3.81e-11,33;CL:0000393,3.29e-10,39;CL:0000211,3.29e-10,39;CL:0000221,1.58e-09,44;CL:0000133,1.58e-09,44;CL:0002319,1.65e-09,43;CL:0000117,1.05e-08,23;CL:0000337,1.05e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.31e-22!71;UBERON:0003075!4.31e-22!71;UBERON:0007284!4.31e-22!71;UBERON:0004121!5.66e-22!102;UBERON:0000924!5.66e-22!102;UBERON:0006601!5.66e-22!102;UBERON:0000073!1.08e-21!75;UBERON:0001016!1.08e-21!75;UBERON:0001017!1.18e-21!73;UBERON:0005743!1.18e-21!73;UBERON:0000033!1.05e-18!63;UBERON:0001049!6.75e-17!52;UBERON:0005068!6.75e-17!52;UBERON:0006241!6.75e-17!52;UBERON:0007135!6.75e-17!52;UBERON:0000955!2.50e-16!50;UBERON:0006238!2.50e-16!50;UBERON:0003056!8.49e-16!49;UBERON:0002616!9.91e-16!49;UBERON:0002020!2.34e-15!34;UBERON:0000025!1.34e-13!114;UBERON:0002791!2.72e-13!29;UBERON:0003528!2.72e-13!29;UBERON:0001893!2.72e-13!29;UBERON:0004111!6.92e-13!122;UBERON:0003080!1.04e-12!40;UBERON:0002780!3.55e-12!39;UBERON:0001890!3.55e-12!39;UBERON:0006240!3.55e-12!39;UBERON:0000956!5.65e-10!21;UBERON:0001869!5.65e-10!21;UBERON:0000203!5.65e-10!21;UBERON:0002619!9.30e-09!17;UBERON:0000468!5.91e-08!333;UBERON:0002021!3.85e-07!10;UBERON:0000411!3.85e-07!10;UBERON:0001950!3.85e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.45e-26,92;UBERON:0001016,1.13e-21,75;UBERON:0001017,1.25e-21,73;UBERON:0002346,7.36e-21,64;UBERON:0003075,7.36e-21,64;UBERON:0007284,7.36e-21,64;UBERON:0004121,4.61e-20,95;UBERON:0000924,4.61e-20,95;UBERON:0006601,4.61e-20,95;UBERON:0000073,7.35e-18,54;UBERON:0010371,4.61e-17,73;UBERON:0001049,7.57e-17,52;UBERON:0005068,7.57e-17,52;UBERON:0006241,7.57e-17,52;UBERON:0007135,7.57e-17,52;UBERON:0003056,7.10e-16,49;UBERON:0002020,1.97e-15,34;UBERON:0000955,1.21e-14,47;UBERON:0006238,1.21e-14,47;UBERON:0002616,4.63e-14,46;UBERON:0000025,1.05e-13,114;UBERON:0003528,2.34e-13,29;UBERON:0002791,2.34e-13,29;UBERON:0001893,2.34e-13,29;UBERON:0004111,5.51e-13,122;UBERON:0003080,9.07e-13,40;UBERON:0002780,3.11e-12,39;UBERON:0001890,3.11e-12,39;UBERON:0006240,3.11e-12,39;UBERON:0000956,5.09e-10,21;UBERON:0001869,5.09e-10,21;UBERON:0000203,5.09e-10,21;UBERON:0002619,8.50e-09,17;UBERON:0002021,3.59e-07,10;UBERON:0000411,3.59e-07,10;UBERON:0001950,3.59e-07,10
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011120628178,1.21635129174099,0.821687657318618,0.51968329191118,0.179026695667481,0.198681354781265,0.240390899039938,0.590758108698309,0.706765149637033,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,8.16229381014761,0,0.269141569828427,0.503653849092235,6.37525660306228,7.69498149349846,5.67770035228522,2.57242054894879,8.02515366456581,57.0399361043237,71.8107368951196,57.2895513439397,80.5991425191895,58.9170967002752,52.877572817279,60.0770025206307,52.6875807772338,63.4399372577886,49.7049899281747,5.08558003162466,10.7736715818278,12.8050204315601,11.1829089851415,8.80375283037526,5.1476182366004,12.6680634846921,9.68364769022803,10.2694147069381,11.3713745293709,11.1530891951705,10.3744487762342,11.6115469262654,11.0123262136375,9.30454597080935,12.859929664643,9.15486174964358,8.10218725947561,12.3625770240992,12.217510371155,10.9718160763333,12.600782237313,9.0605752179982,13.3718703301742,13.6458601602229,13.5383372626682,12.8049581010941,11.8381370147029,11.9507620184358,10.661703161497,9.01626137743724,7.68334962529395,9.82154503607254,10.8455788830176,8.8737041051325,13.2399606307111,9.12333272937093,14.1814895671877,10.7121465958552,15.0002165001271,15.9988806578091
|phase1_expression=11.69086583865,2.79180326111489,1.81999695755814,6.35174843744343,6.51164448930251,1.6787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0,0,66.6219523631326,190.934177148606,132.21719496622,0.630924330716475,0.959801035240171,3.81950686618227,22.3663853097314,0.0992909512008853,0,3.83981814704176,3.89995777814189,0,0.86152399231815,0.430942465371778,1.71021077510736,1.00812051903972,0.221730510655305,6.35030673459631,2.46025915033828,0,0.577703239502549,0.332469290716985,0.408338712524738,4.60384793810598,1.5626706890476,1.0470474879476,0,0.683045484958446,0.971020706062307,9.19046771221714,8.81979301609777,6.60768307782054,0.782391344348039,9.15705656797875,17.1355222532888,25.4703167787311,7.27929392451885,4.31257693094915,0,0,0,7.46052364504246,8.02293631828519,7.73508138416164,22.0524942336962,22.7466121086974,13.9442908771359,3.72728985276045,4.4464739805557,0,0,0,2.69640099466564,7.68436610643109,18.3530613786005,16.4707244764663,19.9808713283813,24.5659846587271,23.1911967999194,15.4338407010842,11.6931474642248,14.7075005857603,46.2486700197433,51.2026225721603,60.9817937027287,22.1568963386726,22.322985038988,25.5247551572812,37.1313388671837,42.207195752376,45.839474333043,33.8822873294718,47.5521413869004,29.4511124403975,4.69502398665741,23.7294698735307,17.102004833399,0,5.439770669662,0,0.649776417447669,0,11.5164424508037,3.40860645156115,4.93593408745451,2.12003744706204,10.563256483251,2.56652954828636,0,0,4.11332977921307,4.30711771307668,4.54972000513305,6.62266502370548,0.258937883647172,23.750742250372,10.4091196059682,12.1786191324856,11.992005857315,15.5244319769201,19.0493705559842,12.0639927676488,0.741584903203122,7.95296463059514,32.7305904221453,8.7354098971601,27.6051898075492,32.9715172131951,0,55.3355706351824,63.8812455781038,2.04365644166873,1.31796636956512,0,0.635351135365324,56.3212804162133,49.4100651044117,34.0523294225863,73.7015117615252,70.8331816805016,56.9339242093195,56.7844420737152,8.35082783572594,34.5851378296059,0.505445516867349,15.5726973355991,16.3951758133007,14.7137346837423,20.8872070574205,20.7972648613287,30.3442786214922,42.1494139737156,30.078253583673,61.8301056066247,0.431135985865684,3.02569728268511,1.93546236580344,3.72632745126877,5.00485048606076,5.2237824978325,6.1734640922383,3.18454826909589,0.702213187313235,0.257347907114715,0,15.5344329401626,16.4168241986767,18.7264543919455,13.494449928357,12.9864392953287,15.1181770629631,15.8123082430277,13.413670069981,21.368057653192,19.0889425899637,27.7443014293671,24.8881245305777,25.8773977742838,21.515911298523,17.5810408576087,63.2972745178023,49.6000231668151,8.26046957459495,0.528901133327089,4.26576501070468,2.55460339046482,4.25262622362908,2.8235693447268,1.77902435075896,2.28270751335071,2.84717436926707,2.63518327558417,3.2673577144035,3.38226002469956,3.31438948102504,2.69645822596266,5.83572734661674,10.3553462092271,0.758671603812327,3.99869794134051,1.1270773567308,1.62921062276251,0.969762435838129,2.73529697572242,1.39120381673366,1.62371162777562,1.41298855057237,1.23397163921801,0,22.5240892716727,33.2184701741313,35.9779379815766,52.5407714396223,28.2177276910328,26.7357144370491,22.4402987211632,30.3192874069316,15.3754391385326,7.18841032636773,8.55924179637558,4.68056509671841,1.51547326768267,1.4351793081753,0.482443521363367,6.65111484599777,4.73728529426212,3.42226450528254,3.39490171550376,2.81628297946203,1.34005005953453,2.14239276797412,2.92700471786698,6.9359463406724,5.97954662051692,5.42146213435456,6.22680595919804,5.69860440157455,6.79850575333104,1.50791283939272,1.63171705145613,0.983528546038072,0.827810238914197,68.5551019247872,71.0302820748751,4.59017847054691,9.59389523376617,13.2513452154828,16.3984272604588,18.9572590004863,20.0733790280144,25.3990488453929,22.0799694015289,21.8597778904443,29.8100975069538,22.9266911208984,61.3723714365651,13.0584878391607,3.5613120733451,11.4020871547503,5.60898418106621,5.30980553359851,4.85561272309963,0.302323556964751,2.45186603682668,1.18120757152309,2.76691633149535,6.71913562237375,3.99887102425256,8.55593708123331,5.37262488490887,4.21674434299995,4.12542172992747,36.4270378156553,8.10274923140896,2.06973894052407,3.85806663056866,5.67488747655275,6.42127743367454,9.21474515371877,7.00269382963578,3.98941903708308,1.90648863777438,5.95426674748397,4.45192882941996,6.45857706783622,4.28221766989907,3.22305328808468,3.61109979439135,4.37221254944776,76.9515003343615,80.8219266173843,4.12773735926445,12.222838806401,132.046288360288,80.9229828108469,102.950177942935,2.54967644990783,2.23922323717853,2.07299960706636,13.3653886522116,4.11236791655476,4.87966721104437,4.64422965533745,3.55450103224597,3.9305261474312,5.25970950900801,8.43065248398426,10.4702376793612,2.59229946583586,1.24267862617385,23.1114104860518,4.18646328923141,4.13646226142744,7.00024278038572,8.39538852605252,7.26511339610346,10.5621514781179,6.2498104725096,10.8005124758482,5.79801889982414,31.3952706821073,0.316011120628178,1.21635129174099,0.821687657318618,0.51968329191118,0.179026695667481,0.198681354781265,0.240390899039938,0.590758108698309,0.706765149637033,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,8.16229381014761,0,0.269141569828427,0.503653849092235,6.37525660306228,7.69498149349846,5.67770035228522,2.57242054894879,8.02515366456581,57.0399361043237,71.8107368951196,57.2895513439397,80.5991425191895,58.9170967002752,52.877572817279,60.0770025206307,52.6875807772338,63.4399372577886,49.7049899281747,5.08558003162466,10.7736715818278,12.8050204315601,11.1829089851415,8.80375283037526,5.1476182366004,12.6680634846921,9.68364769022803,10.2694147069381,11.3713745293709,11.1530891951705,10.3744487762342,11.6115469262654,11.0123262136375,9.30454597080935,12.859929664643,9.15486174964358,8.10218725947561,12.3625770240992,12.217510371155,10.9718160763333,12.600782237313,9.0605752179982,13.3718703301742,13.6458601602229,13.5383372626682,12.8049581010941,11.8381370147029,11.9507620184358,10.661703161497,9.01626137743724,7.68334962529395,9.82154503607254,10.8455788830176,8.8737041051325,13.2399606307111,9.12333272937093,14.1814895671877,10.7121465958552,15.0002165001271,15.9988806578091
|short_description=p2@Clcn3
}}
}}

Latest revision as of 15:49, 25 September 2015

Short description:p2@Clcn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clcn3_5end
Coexpression cluster:MCL_coexpression_mm9:704
Association with transcript: 0bp_to_ENSMUST00000110302, ENSMUST00000132234_5end
EntrezGene:Clcn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clcn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A166.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3190.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5132.22
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C322.05
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F351.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D760.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.45
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F923.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D723.75
adrenal gland, embryo E14.CNhs11038.406-44C510.41
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F515.52
adrenal gland, neonate N00.CNhs11191.1311-23C119.05
adrenal gland, neonate N25.CNhs11223.1377-27I312.06
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A627.61
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B255.34
cerebellum, neonate N30.CNhs11135.1395-42I263.88
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A456.32
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F134.05
cortex, adult.CNhs10473.12-14D573.70
cortex, neonate N30.CNhs11107.1392-42F270.83
diencephalon, adult.CNhs10482.20-12F256.93
diencephalon, neonate N30.CNhs11201.1388-42B256.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A234.59
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G415.57
eyeball, embryo E12.CNhs11016.345-16C616.40
eyeball, embryo E14.CNhs10521.399-16E214.71
eyeball, embryo E15.CNhs10593.426-16C920.89
eyeball, embryo E17.CNhs11023.1261-18D420.80
eyeball, neonate N00.CNhs11207.633-15C630.34
eyeball, neonate N01.CNhs11140.1532-43E742.15
eyeball, neonate N02.CNhs11205.1551-44G830.08
eyeball, neonate N16.CNhs11188.777-19A261.83
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F516.42
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D413.49
heart, embryo E15.CNhs11017.431-16C812.99
heart, embryo E16.CNhs11021.457-17C615.12
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E321.37
heart, neonate N03.CNhs11221.1349-25I219.09
heart, neonate N10.CNhs11118.749-24G127.74
heart, neonate N16.CNhs11209.782-15G124.89
heart, neonate N20.CNhs11127.821-26I625.88
heart, neonate N25.CNhs11196.1351-25D321.52
heart, neonate N30.CNhs11202.1390-42D217.58
hippocampus, adult.CNhs10478.13-16E863.30
hippocampus, neonate N00.CNhs11228.627-43G149.60
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F822.52
liver, embryo E13.CNhs10524.378-3H633.22
liver, embryo E14.CNhs10594.409-16E135.98
liver, embryo E15.CNhs10520.433-16D752.54
liver, embryo E16.CNhs10523.462-17F528.22
liver, embryo E17.CNhs10510.481-18A326.74
liver, embryo E18.CNhs10579.499-43G422.44
liver, neonate N00.CNhs11117.641-24F430.32
liver, neonate N03.CNhs11123.1345-25G215.38
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C268.56
medulla oblongata, neonate N30.CNhs11200.1396-42A371.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.40
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I961.37
ovary, adult.CNhs10507.91-2I713.06
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G836.43
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C976.95
spleen, adult.CNhs10465.25-2G280.82
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D1132.05
spleen, neonate N20.CNhs11112.824-19H180.92
spleen, neonate N25.CNhs11099.1354-25G3102.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A98.43
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B710.56
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E231.40
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A271.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A357.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D780.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A458.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A949.70
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.61
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D115.00
whole body, neonate N10.CNhs10518.761-6B416.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.81e-1133
neuronal stem cell3.81e-1133
neuroblast3.81e-1133
electrically signaling cell3.81e-1133
electrically responsive cell3.29e-1039
electrically active cell3.29e-1039
ectodermal cell1.58e-0944
neurectodermal cell1.58e-0944
neural cell1.65e-0943
CNS neuron (sensu Vertebrata)1.05e-0823
neuroblast (sensu Vertebrata)1.05e-0823

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.45e-2692
nervous system1.13e-2175
central nervous system1.25e-2173
neurectoderm7.36e-2164
neural plate7.36e-2164
presumptive neural plate7.36e-2164
ectoderm-derived structure4.61e-2095
ectoderm4.61e-2095
presumptive ectoderm4.61e-2095
regional part of nervous system7.35e-1854
ecto-epithelium4.61e-1773
neural tube7.57e-1752
neural rod7.57e-1752
future spinal cord7.57e-1752
neural keel7.57e-1752
pre-chordal neural plate7.10e-1649
gray matter1.97e-1534
brain1.21e-1447
future brain1.21e-1447
regional part of brain4.63e-1446
tube1.05e-13114
brain grey matter2.34e-1329
regional part of telencephalon2.34e-1329
telencephalon2.34e-1329
anatomical conduit5.51e-13122
anterior neural tube9.07e-1340
regional part of forebrain3.11e-1239
forebrain3.11e-1239
future forebrain3.11e-1239
cerebral cortex5.09e-1021
cerebral hemisphere5.09e-1021
pallium5.09e-1021
regional part of cerebral cortex8.50e-0917
occipital lobe3.59e-0710
visual cortex3.59e-0710
neocortex3.59e-0710
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