FFCP PHASE1:Mm9::chrX:106392111..106392133,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:106392111..106392133,+
|short_description=p1@Gm6377
|description=CAGE_peak_1_at_Gm6377_5end
|association_with_transcript=14bp_to_ENSMUST00000060013_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=622976 | |EntrezGene=622976 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHV4 | |UniProt=Q8BHV4 | ||
|association_with_transcript=14bp_to_ENSMUST00000060013_5end | |||
|cluster_id=chrX:106392111..106392133,+ | |||
|description=CAGE_peak_1_at_Gm6377_5end | |||
|id=chrX:106392111..106392133,+ | |||
|ontology_enrichment_celltype=CL:0000049!5.71e-08!19;CL:0000988!2.67e-07!32;CL:0002032!2.67e-07!32;CL:0000037!2.67e-07!32;CL:0000566!2.67e-07!32;CL:0000837!2.67e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.94e-15,19;CL:0000988,4.08e-12,32;CL:0002032,4.08e-12,32;CL:0000037,4.08e-12,32;CL:0000837,4.08e-12,32;CL:0000763,3.59e-11,16;CL:0002320,2.08e-09,46;CL:0000134,2.08e-09,46;CL:0000553,8.54e-09,6;CL:0000556,8.54e-09,6;CL:0000219,2.44e-07,54;CL:0000557,3.66e-07,7;CL:0000839,4.08e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.09e-17!70;UBERON:0002193!8.05e-12!48;UBERON:0001474!8.38e-11!22;UBERON:0004765!8.38e-11!22;UBERON:0001434!8.38e-11!22;UBERON:0002371!2.03e-10!16;UBERON:0002390!3.52e-10!45;UBERON:0003061!3.52e-10!45;UBERON:0000926!1.02e-09!193;UBERON:0004120!1.02e-09!193;UBERON:0006603!1.02e-09!193;UBERON:0003081!2.01e-09!88;UBERON:0002204!1.16e-08!32;UBERON:0005057!1.57e-07!51;UBERON:0009569!6.66e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-13,16;UBERON:0002193,1.20e-12,48;UBERON:0002405,1.20e-12,48;UBERON:0001474,1.97e-12,22;UBERON:0004765,1.97e-12,22;UBERON:0001434,1.97e-12,22;UBERON:0002204,3.73e-10,32;UBERON:0002390,9.38e-10,45;UBERON:0003061,9.38e-10,45;UBERON:0002384,2.08e-09,46;UBERON:0002106,8.72e-08,6;UBERON:0004457,8.72e-08,6;UBERON:0000042,8.72e-08,6;UBERON:0004854,8.72e-08,6;UBERON:0009034,8.72e-08,6;UBERON:0002095,8.72e-08,6;UBERON:0004782,8.72e-08,6;UBERON:0003281,8.72e-08,6;UBERON:0009664,8.72e-08,6;UBERON:0002296,8.72e-08,6;UBERON:0005602,8.72e-08,6;UBERON:0001179,8.72e-08,6;UBERON:0006293,8.72e-08,6 | |||
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| ||
|short_description=p1@Gm6377 | |||
}} | }} |
Latest revision as of 13:04, 1 October 2015
Short description: | p1@Gm6377 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm6377_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 14bp_to_ENSMUST00000060013_5end |
EntrezGene: | Gm6377 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.94e-15 | 19 |
hematopoietic cell | 4.08e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.08e-12 | 32 |
hematopoietic stem cell | 4.08e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.08e-12 | 32 |
myeloid cell | 3.59e-11 | 16 |
connective tissue cell | 2.08e-09 | 46 |
mesenchymal cell | 2.08e-09 | 46 |
megakaryocyte progenitor cell | 8.54e-09 | 6 |
megakaryocyte | 8.54e-09 | 6 |
motile cell | 2.44e-07 | 54 |
granulocyte monocyte progenitor cell | 3.66e-07 | 7 |
myeloid lineage restricted progenitor cell | 4.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-13 | 16 |
hemolymphoid system | 1.20e-12 | 48 |
immune system | 1.20e-12 | 48 |
bone element | 1.97e-12 | 22 |
skeletal element | 1.97e-12 | 22 |
skeletal system | 1.97e-12 | 22 |
musculoskeletal system | 3.73e-10 | 32 |
hematopoietic system | 9.38e-10 | 45 |
blood island | 9.38e-10 | 45 |
connective tissue | 2.08e-09 | 46 |
spleen | 8.72e-08 | 6 |
cavity lining | 8.72e-08 | 6 |
serous membrane | 8.72e-08 | 6 |
gastrointestinal system mesentery | 8.72e-08 | 6 |
stomach region | 8.72e-08 | 6 |
mesentery | 8.72e-08 | 6 |
gastrointestinal system serosa | 8.72e-08 | 6 |
mesentery of stomach | 8.72e-08 | 6 |
gut mesentery | 8.72e-08 | 6 |
dorsal mesentery | 8.72e-08 | 6 |
dorsal mesogastrium | 8.72e-08 | 6 |
peritoneal cavity | 8.72e-08 | 6 |
spleen primordium | 8.72e-08 | 6 |