FFCP PHASE1:Mm9::chrX:35917522..35917536,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:35917522..35917536,-
|short_description=p11@Cul4b
|description=CAGE_peak_11_at_Cul4b_5end
|association_with_transcript=302bp_to_ENSMUST00000147129,uc009tab...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72584 | |EntrezGene=72584 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=302bp_to_ENSMUST00000147129,uc009tab.1_5end | |||
|cluster_id=chrX:35917522..35917536,- | |||
|description=CAGE_peak_11_at_Cul4b_5end | |||
|id=chrX:35917522..35917536,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.96e-08,3;CL:0000359,2.96e-08,3;CL:0002539,2.96e-08,3;CL:0000514,2.96e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.82e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,8.06e-13,5;UBERON:0007500,8.06e-13,5;UBERON:0001981,8.06e-13,5;UBERON:0002049,8.06e-13,5;UBERON:0007798,8.06e-13,5;UBERON:0004537,8.06e-13,5;UBERON:0006965,8.06e-13,5;UBERON:0000947,1.72e-10,4;UBERON:0001637,1.72e-10,4;UBERON:0004573,1.72e-10,4;UBERON:0003509,1.72e-10,4;UBERON:0004571,1.72e-10,4;UBERON:0010191,1.72e-10,4;UBERON:0004572,1.72e-10,4;UBERON:0002021,5.30e-10,10;UBERON:0000411,5.30e-10,10;UBERON:0001950,5.30e-10,10;UBERON:0007023,1.28e-08,51;UBERON:0001135,2.96e-08,3;UBERON:0004237,2.96e-08,3;UBERON:0004695,2.96e-08,3;UBERON:0002111,2.96e-08,3;UBERON:0004178,2.96e-08,3;UBERON:0000073,3.02e-08,54;UBERON:0001049,1.65e-07,52;UBERON:0005068,1.65e-07,52;UBERON:0006241,1.65e-07,52;UBERON:0007135,1.65e-07,52;UBERON:0004111,2.09e-07,122;UBERON:0001017,8.24e-07,73 | |||
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| ||
|short_description=p11@Cul4b | |||
}} | }} |
Latest revision as of 20:24, 1 October 2015
Short description: | p11@Cul4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Cul4b_5end |
Coexpression cluster: | NA |
Association with transcript: | 302bp_to_ENSMUST00000147129, uc009tab.1_5end |
EntrezGene: | Cul4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.96e-08 | 3 |
vascular associated smooth muscle cell | 2.96e-08 | 3 |
aortic smooth muscle cell | 2.96e-08 | 3 |
smooth muscle myoblast | 2.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 8.06e-13 | 5 |
epithelial tube open at both ends | 8.06e-13 | 5 |
blood vessel | 8.06e-13 | 5 |
vasculature | 8.06e-13 | 5 |
vascular system | 8.06e-13 | 5 |
blood vasculature | 8.06e-13 | 5 |
vascular cord | 8.06e-13 | 5 |
aorta | 1.72e-10 | 4 |
artery | 1.72e-10 | 4 |
systemic artery | 1.72e-10 | 4 |
arterial blood vessel | 1.72e-10 | 4 |
systemic arterial system | 1.72e-10 | 4 |
aortic system | 1.72e-10 | 4 |
arterial system | 1.72e-10 | 4 |
occipital lobe | 5.30e-10 | 10 |
visual cortex | 5.30e-10 | 10 |
neocortex | 5.30e-10 | 10 |
adult organism | 1.28e-08 | 51 |
smooth muscle tissue | 2.96e-08 | 3 |
blood vessel smooth muscle | 2.96e-08 | 3 |
arterial system smooth muscle | 2.96e-08 | 3 |
artery smooth muscle tissue | 2.96e-08 | 3 |
aorta smooth muscle tissue | 2.96e-08 | 3 |
regional part of nervous system | 3.02e-08 | 54 |
neural tube | 1.65e-07 | 52 |
neural rod | 1.65e-07 | 52 |
future spinal cord | 1.65e-07 | 52 |
neural keel | 1.65e-07 | 52 |
anatomical conduit | 2.09e-07 | 122 |
central nervous system | 8.24e-07 | 73 |