Personal tools

FFCP PHASE1:Mm9::chrX:70748413..70748455,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:70748413..70748455,+ |short_description=p1@Atp2b3 |description=CAGE_peak_1_at_Atp2b3_5end |association_with_transcript=0bp_to_ENSMUST00000033744,ENSMUST000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:70748413..70748455,+
|DHSsupport=NA
|short_description=p1@Atp2b3
|DPIdataset=NA
|description=CAGE_peak_1_at_Atp2b3_5end
|association_with_transcript=0bp_to_ENSMUST00000033744,ENSMUST00000088429,ENSMUST00000114479,NM_177236,uc009tlz.1_5end
|EntrezGene=320707
|EntrezGene=320707
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C048,Q0VF55,A2ALL9
|UniProt=Q8C048,Q0VF55,A2ALL9
|association_with_transcript=0bp_to_ENSMUST00000033744,ENSMUST00000088429,ENSMUST00000114479,NM_177236,uc009tlz.1_5end
|cluster_id=chrX:70748413..70748455,+
|description=CAGE_peak_1_at_Atp2b3_5end
|id=chrX:70748413..70748455,+
|ontology_enrichment_celltype=CL:0000540!4.47e-15!33;CL:0000047!4.47e-15!33;CL:0000031!4.47e-15!33;CL:0000404!4.47e-15!33;CL:0000117!4.57e-13!23;CL:0000337!4.57e-13!23;CL:0000393!9.77e-11!39;CL:0000211!9.77e-11!39;CL:0000221!1.30e-08!44;CL:0000133!1.30e-08!44;CL:0002319!2.12e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.58e-17,23;CL:0000337,6.58e-17,23;CL:0000540,9.81e-17,33;CL:0000047,9.81e-17,33;CL:0000031,9.81e-17,33;CL:0000404,9.81e-17,33;CL:0000393,1.64e-12,39;CL:0000211,1.64e-12,39;CL:0000221,1.09e-10,44;CL:0000133,1.09e-10,44;CL:0002319,2.08e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.23e-22!102;UBERON:0000924!4.23e-22!102;UBERON:0006601!4.23e-22!102;UBERON:0001017!6.90e-22!73;UBERON:0005743!6.90e-22!73;UBERON:0000073!5.01e-21!75;UBERON:0001016!5.01e-21!75;UBERON:0002346!8.16e-21!71;UBERON:0003075!8.16e-21!71;UBERON:0007284!8.16e-21!71;UBERON:0001049!1.03e-17!52;UBERON:0005068!1.03e-17!52;UBERON:0006241!1.03e-17!52;UBERON:0007135!1.03e-17!52;UBERON:0002020!2.75e-17!34;UBERON:0000955!7.10e-17!50;UBERON:0006238!7.10e-17!50;UBERON:0000033!1.35e-16!63;UBERON:0002616!2.65e-16!49;UBERON:0002791!2.32e-14!29;UBERON:0003528!2.32e-14!29;UBERON:0001893!2.32e-14!29;UBERON:0003080!4.29e-13!40;UBERON:0003056!1.00e-12!49;UBERON:0002780!1.79e-12!39;UBERON:0001890!1.79e-12!39;UBERON:0006240!1.79e-12!39;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0002021!4.57e-08!10;UBERON:0000411!4.57e-08!10;UBERON:0001950!4.57e-08!10;UBERON:0002619!6.59e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-26,73;UBERON:0001016,8.06e-25,75;UBERON:0000073,8.22e-24,54;UBERON:0002020,2.74e-23,34;UBERON:0001049,8.19e-22,52;UBERON:0005068,8.19e-22,52;UBERON:0006241,8.19e-22,52;UBERON:0007135,8.19e-22,52;UBERON:0003528,2.33e-19,29;UBERON:0002791,2.33e-19,29;UBERON:0001893,2.33e-19,29;UBERON:0004121,2.81e-18,95;UBERON:0000924,2.81e-18,95;UBERON:0006601,2.81e-18,95;UBERON:0000955,5.82e-18,47;UBERON:0006238,5.82e-18,47;UBERON:0002346,2.12e-17,64;UBERON:0003075,2.12e-17,64;UBERON:0007284,2.12e-17,64;UBERON:0002616,3.07e-17,46;UBERON:0003080,3.71e-15,40;UBERON:0010371,8.95e-15,73;UBERON:0002780,2.33e-14,39;UBERON:0001890,2.33e-14,39;UBERON:0006240,2.33e-14,39;UBERON:0010314,1.92e-13,92;UBERON:0000956,5.01e-13,21;UBERON:0001869,5.01e-13,21;UBERON:0000203,5.01e-13,21;UBERON:0003056,7.53e-12,49;UBERON:0002619,1.08e-10,17;UBERON:0002021,3.06e-10,10;UBERON:0000411,3.06e-10,10;UBERON:0001950,3.06e-10,10;UBERON:0002420,1.28e-07,8;UBERON:0007245,1.28e-07,8;UBERON:0010009,1.28e-07,8;UBERON:0010011,1.28e-07,8;UBERON:0000454,1.28e-07,8;UBERON:0003076,1.84e-07,12;UBERON:0003057,1.84e-07,12
|phase1_expression=1.60148847104794,0,0,0.90739263392049,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,5.26022798234954,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,2.48855069540346,2.43010688997043,1.89292465216244,17.9960120174396,14.1355866209033,1.83736198822431,1.24599112323707,4.5960939330501,30.8324466798288,29.8788371119339,29.3388478519425,5.27545150920775,3.93396867490361,5.2091337055676,30.1517638921491,19.1339287410771,26.2812986176113,18.5616008848411,10.9626194215309,8.01517617048792,0,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0,0.448026887097336,2.38755514223978,0,0,0,1.40843419776681,0,0,0,0,0,0,0.79928715803342,0,16.92240385339,0.867426633830679,1.21786191324856,2.07553947530453,2.26083960828934,3.29248379979973,8.92232798440696,0,0,1.76922110389975,1.7794353494215,1.32504911076236,1.93950101254089,0,43.0387771606974,50.8955497556696,0.510914110417183,0,0,0,23.5171303865572,30.652540388848,6.91098936620754,28.3333641913411,19.9458056717658,19.1165000994795,22.2270530402828,0.101839363850316,1.99051152976149,16.9324248150562,1.47309299120532,0,0.459804208866946,0.360124259610698,0.452114453507145,0.612328492361951,0.384341160854549,0.281105173679186,1.55222022443409,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0.329119699826961,0,0.243206428637567,0,0,0,55.0959665238013,10.3933658503077,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.795825888164603,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,20.5120451536356,0,9.08895337935743,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,1.78238939265915,1.41538265394416,1.61924280669958,2.04579100537918,3.16230222357219,11.2462460747632,3.12268187458191,0.35613120733451,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0.913394847343798,0,0,1.10264199027481,0.65954501176592,0.484393280087717,0.301564624640779,0.119372344003136,0.328281799490123,0,22.6218868452822,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.747582730219894,0.496375471371293,2.52786544847262,1.80823752868824,2.19642963138012,1.05621514781179,0.2604087696879,0.629156066554265,1.20792060413003,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0.501572104035363,23.7195773899168,26.6988637174163,18.3326564300607,25.6061241692095,26.0331357512844,35.5035131773159,24.300810008345,21.1650965515384,21.2976932222576,23.2992140288319,0.103787347584177,0,0.341467211508268,1.70174701947806,1.25767897576789,0.735374033800057,1.77797382241292,0.618105171716683,2.56735367673452,1.26348605881899,1.52087579934144,2.26351609663291,1.21733959710847,1.34452820050225,1.49332219284595,1.42888107384922,2.43357084484197,1.73618298417335,3.29668720642645,2.06078488188156,2.40008476669791,1.4198064492747,1.1921809497366,1.59881058295561,1.59985946706062,1.01537529470012,1.64635175585495,1.05227884575137,2.98769050460896,2.24456908663095,2.01679530811096,1.87158516513571,3.27384834535751,2.01417893541756,1.73615949883027,2.74791635731741,1.16965804222704,2.14871054048298,1.3390183244819,1.32354851471709,2.55054619182464
|phase1_expression=1.60148847104794,0,0,0.90739263392049,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,5.26022798234954,5.81890077199236,5.70448263155561,0,0,0,0,0,0,0,2.48855069540346,2.43010688997043,1.89292465216244,17.9960120174396,14.1355866209033,1.83736198822431,1.24599112323707,4.5960939330501,30.8324466798288,29.8788371119339,29.3388478519425,5.27545150920775,3.93396867490361,5.2091337055676,30.1517638921491,19.1339287410771,26.2812986176113,18.5616008848411,10.9626194215309,8.01517617048792,0,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0,0.448026887097336,2.38755514223978,0,0,0,1.40843419776681,0,0,0,0,0,0,0.79928715803342,0,16.92240385339,0.867426633830679,1.21786191324856,2.07553947530453,2.26083960828934,3.29248379979973,8.92232798440696,0,0,1.76922110389975,1.7794353494215,1.32504911076236,1.93950101254089,0,43.0387771606974,50.8955497556696,0.510914110417183,0,0,0,23.5171303865572,30.652540388848,6.91098936620754,28.3333641913411,19.9458056717658,19.1165000994795,22.2270530402828,0.101839363850316,1.99051152976149,16.9324248150562,1.47309299120532,0,0.459804208866946,0.360124259610698,0.452114453507145,0.612328492361951,0.384341160854549,0.281105173679186,1.55222022443409,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0.329119699826961,0,0.243206428637567,0,0,0,55.0959665238013,10.3933658503077,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0.795825888164603,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,20.5120451536356,0,9.08895337935743,0.94652465824877,0.780877488593277,1.93881057959519,0.716906393857656,1.78238939265915,1.41538265394416,1.61924280669958,2.04579100537918,3.16230222357219,11.2462460747632,3.12268187458191,0.35613120733451,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0.913394847343798,0,0,1.10264199027481,0.65954501176592,0.484393280087717,0.301564624640779,0.119372344003136,0.328281799490123,0,22.6218868452822,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.747582730219894,0.496375471371293,2.52786544847262,1.80823752868824,2.19642963138012,1.05621514781179,0.2604087696879,0.629156066554265,1.20792060413003,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0.501572104035363,23.7195773899168,26.6988637174163,18.3326564300607,25.6061241692095,26.0331357512844,35.5035131773159,24.300810008345,21.1650965515384,21.2976932222576,23.2992140288319,0.103787347584177,0,0.341467211508268,1.70174701947806,1.25767897576789,0.735374033800057,1.77797382241292,0.618105171716683,2.56735367673452,1.26348605881899,1.52087579934144,2.26351609663291,1.21733959710847,1.34452820050225,1.49332219284595,1.42888107384922,2.43357084484197,1.73618298417335,3.29668720642645,2.06078488188156,2.40008476669791,1.4198064492747,1.1921809497366,1.59881058295561,1.59985946706062,1.01537529470012,1.64635175585495,1.05227884575137,2.98769050460896,2.24456908663095,2.01679530811096,1.87158516513571,3.27384834535751,2.01417893541756,1.73615949883027,2.74791635731741,1.16965804222704,2.14871054048298,1.3390183244819,1.32354851471709,2.55054619182464
|short_description=p1@Atp2b3
}}
}}

Latest revision as of 23:41, 1 October 2015

Short description:p1@Atp2b3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atp2b3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000033744, ENSMUST00000088429, ENSMUST00000114479, NM_177236, uc009tlz.1_5end
EntrezGene:Atp2b3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atp2b3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.56
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B243.04
cerebellum, neonate N30.CNhs11135.1395-42I250.90
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.52
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E855.10
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C224.40
medulla oblongata, neonate N30.CNhs11200.1396-42A320.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C922.62
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.58e-1723
neuroblast (sensu Vertebrata)6.58e-1723
neuron9.81e-1733
neuronal stem cell9.81e-1733
neuroblast9.81e-1733
electrically signaling cell9.81e-1733
electrically responsive cell1.64e-1239
electrically active cell1.64e-1239
ectodermal cell1.09e-1044
neurectodermal cell1.09e-1044
neural cell2.08e-1043

Uber anatomy
Ontology termp-valuen
central nervous system4.47e-2673
nervous system8.06e-2575
regional part of nervous system8.22e-2454
gray matter2.74e-2334
neural tube8.19e-2252
neural rod8.19e-2252
future spinal cord8.19e-2252
neural keel8.19e-2252
brain grey matter2.33e-1929
regional part of telencephalon2.33e-1929
telencephalon2.33e-1929
ectoderm-derived structure2.81e-1895
ectoderm2.81e-1895
presumptive ectoderm2.81e-1895
brain5.82e-1847
future brain5.82e-1847
neurectoderm2.12e-1764
neural plate2.12e-1764
presumptive neural plate2.12e-1764
regional part of brain3.07e-1746
anterior neural tube3.71e-1540
ecto-epithelium8.95e-1573
regional part of forebrain2.33e-1439
forebrain2.33e-1439
future forebrain2.33e-1439
structure with developmental contribution from neural crest1.92e-1392
cerebral cortex5.01e-1321
cerebral hemisphere5.01e-1321
pallium5.01e-1321
pre-chordal neural plate7.53e-1249
regional part of cerebral cortex1.08e-1017
occipital lobe3.06e-1010
visual cortex3.06e-1010
neocortex3.06e-1010
basal ganglion1.28e-078
nuclear complex of neuraxis1.28e-078
aggregate regional part of brain1.28e-078
collection of basal ganglia1.28e-078
cerebral subcortex1.28e-078
posterior neural tube1.84e-0712
chordal neural plate1.84e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:70748413..70748455,%2B&oldid=4328481"