FFCP PHASE1:Hg19::chr11:111637373..111637437,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:111637373..111637437,- to FFCP PHASE1:Hg19::chr11:111637373..111637437,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5519 | |EntrezGene=5519 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9303 | |HGNC=9303 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUF3,B4DGQ6,F8W8G1,P30154,A8MY67,B4DK91,B4DWW5 | |UniProt=E7EUF3,B4DGQ6,F8W8G1,P30154,A8MY67,B4DK91,B4DWW5 | ||
|association_with_transcript=-204bp_to_ENST00000412902,NM_001177562,NM_001177563,NM_002716,NM_181699,NM_181700,uc001plw.1,uc001plx.1,uc010rwi.1,uc010rwj.1,uc010rwk.1,uc010rwl.1_5end | |||
|cluster_id=chr11:111637373..111637437,- | |||
|description=CAGE_peak_2_at_PPP2R1B_5end | |||
|id=chr11:111637373..111637437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.09e-09;29 | |||
|ontology_enrichment_disease=DOID:305!3.11e-12!106;DOID:0050687!3.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.93e-12,106;DOID:0050687,3.80e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-20!115;UBERON:0000481!4.01e-16!347;UBERON:0000475!7.14e-14!365;UBERON:0000033!2.07e-11!123;UBERON:0001007!2.65e-11!155;UBERON:0001555!2.65e-11!155;UBERON:0007026!2.65e-11!155;UBERON:0000153!3.19e-11!129;UBERON:0007811!3.19e-11!129;UBERON:0000062!5.06e-11!511;UBERON:0000477!7.63e-11!286;UBERON:0004121!1.19e-10!169;UBERON:0000468!1.40e-10!659;UBERON:0004119!6.14e-10!169;UBERON:0000925!6.14e-10!169;UBERON:0006595!6.14e-10!169;UBERON:0000924!1.34e-09!173;UBERON:0006601!1.34e-09!173;UBERON:0002616!3.90e-09!59;UBERON:0001049!1.33e-08!57;UBERON:0005068!1.33e-08!57;UBERON:0006241!1.33e-08!57;UBERON:0007135!1.33e-08!57;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001017!2.42e-08!82;UBERON:0000922!4.00e-08!612;UBERON:0005743!4.62e-08!86;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0004921!1.45e-07!129;UBERON:0004185!1.45e-07!129;UBERON:0000077!1.76e-07!130;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0000064!3.08e-07!219;UBERON:0004111!4.58e-07!241;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0000467!6.67e-07!625;UBERON:0003075!7.53e-07!86;UBERON:0007284!7.53e-07!86;UBERON:0000923!8.17e-07!604;UBERON:0005291!8.17e-07!604;UBERON:0006598!8.17e-07!604;UBERON:0002532!8.17e-07!604;UBERON:0003080!9.07e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.79e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.67e-21,114;UBERON:0011216,3.57e-12,223;UBERON:0001007,2.57e-10,145;UBERON:0001555,2.57e-10,145;UBERON:0007026,2.57e-10,145;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0010314,1.84e-07,132;UBERON:0001004,6.04e-07,74;UBERON:0004121,9.18e-07,171;UBERON:0000924,9.18e-07,171;UBERON:0006601,9.18e-07,171 | |||
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| ||
|short_description=p2@PPP2R1B | |||
}} | }} |
Latest revision as of 03:01, 25 September 2015
Short description: | p2@PPP2R1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP2R1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000412902, NM_001177562, NM_001177563, NM_002716, NM_181699, NM_181700, uc001plw.1, uc001plx.1, uc010rwi.1, uc010rwj.1, uc010rwk.1, uc010rwl.1_5end |
EntrezGene: | PPP2R1B |
HGNC: | 9303 |
UniProt: | E7EUF3B4DGQ6F8W8G1P30154A8MY67B4DK91B4DWW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.67e-21 | 114 |
organ system subdivision | 3.57e-12 | 223 |
digestive system | 2.57e-10 | 145 |
digestive tract | 2.57e-10 | 145 |
primitive gut | 2.57e-10 | 145 |
endoderm-derived structure | 1.62e-08 | 160 |
endoderm | 1.62e-08 | 160 |
presumptive endoderm | 1.62e-08 | 160 |
structure with developmental contribution from neural crest | 1.84e-07 | 132 |
respiratory system | 6.04e-07 | 74 |
ectoderm-derived structure | 9.18e-07 | 171 |
ectoderm | 9.18e-07 | 171 |
presumptive ectoderm | 9.18e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.93e-12 | 106 |
cell type cancer | 3.80e-07 | 143 |